RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 DUOX2Q9NRD8 1548 aa33.98■■■■□ 3.03
HMG20B-203ENST00000416526 EIF2AK4Q9P2K8 1649 aaKnown RBP33.97■■■■□ 3.03
HMG20B-203ENST00000416526 KDM5DQ9BY66 1539 aa33.97■■■■□ 3.03
HMG20B-203ENST00000416526 FAM135AQ9P2D6 1515 aa33.96■■■■□ 3.03
HMG20B-203ENST00000416526 KIF15Q9NS87 1388 aa33.96■■■■□ 3.03
HMG20B-203ENST00000416526 RRP7BPQ9NSQ0 103 aa33.92■■■■□ 3.02
HMG20B-203ENST00000416526 WASHC2CQ9Y4E1 1318 aa33.92■■■■□ 3.02
HMG20B-203ENST00000416526 FAM50AQ14320 339 aaKnown RBP33.91■■■■□ 3.02
HMG20B-203ENST00000416526 MROH1Q8NDA8 1641 aa33.9■■■■□ 3.02
HMG20B-203ENST00000416526 PPARGC1BQ86YN6 1023 aaKnown RBP33.9■■■■□ 3.02
HMG20B-203ENST00000416526 CHIC2Q9UKJ5 165 aa33.9■■■■□ 3.02
HMG20B-203ENST00000416526 STRCQ7RTU9 1775 aa33.9■■■■□ 3.02
HMG20B-203ENST00000416526 MYO3AQ8NEV4 1616 aa33.87■■■■□ 3.01
HMG20B-203ENST00000416526 ERBINQ96RT1 1412 aa33.86■■■■□ 3.01
HMG20B-203ENST00000416526 ABCC3O15438 1527 aa33.85■■■■□ 3.01
HMG20B-203ENST00000416526 PZPP20742 1482 aa33.85■■■■□ 3.01
HMG20B-203ENST00000416526 FBXO31Q5XUX0 539 aaPredicted RBP33.85■■■■□ 3.01
HMG20B-203ENST00000416526 NCOA1Q15788 1441 aa33.85■■■■□ 3.01
HMG20B-203ENST00000416526 ANKRD30AQ9BXX3 1397 aa33.84■■■■□ 3.01
HMG20B-203ENST00000416526 ZNF142P52746 1687 aaPredicted RBP33.82■■■■□ 3
HMG20B-203ENST00000416526 ZC3H13Q5T200 1668 aaKnown RBP33.82■■■■□ 3
HMG20B-203ENST00000416526 ADGRL2O95490 1459 aa33.82■■■■□ 3
HMG20B-203ENST00000416526 CEP170BQ9Y4F5 1589 aaPredicted RBP33.8■■■■□ 3
HMG20B-203ENST00000416526 CEP152O94986 1710 aa33.77■■■■□ 3
HMG20B-203ENST00000416526 PRDM15P57071 1507 aaPredicted RBP33.77■■■■□ 3
HMG20B-203ENST00000416526 CAMSAP1Q5T5Y3 1602 aa33.76■■■■□ 3
HMG20B-203ENST00000416526 TNRQ92752 1358 aa33.76■■■■□ 3
HMG20B-203ENST00000416526 DEPDC5O75140 1603 aa33.75■■■□□ 2.99
HMG20B-203ENST00000416526 A2ML1A8K2U0 1454 aa33.72■■■□□ 2.99
HMG20B-203ENST00000416526 DMRT2Q9Y5R5 561 aa33.7■■■□□ 2.99
HMG20B-203ENST00000416526 ILDR1Q86SU0 546 aaPredicted RBP33.69■■■□□ 2.98
HMG20B-203ENST00000416526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.68■■■□□ 2.987e-7■■□□□ 13.2
HMG20B-203ENST00000416526 PTPRTO14522 1441 aa33.66■■■□□ 2.98
HMG20B-203ENST00000416526 SPATA31D1Q6ZQQ2 1576 aa33.66■■■□□ 2.98
HMG20B-203ENST00000416526 PLA2R1Q13018 1463 aa33.65■■■□□ 2.98
HMG20B-203ENST00000416526 ERVK-7P63135 1459 aa33.64■■■□□ 2.98
HMG20B-203ENST00000416526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.64■■■□□ 2.981e-6■■□□□ 12.5
HMG20B-203ENST00000416526 VWDEQ8N2E2 1590 aa33.64■■■□□ 2.98
HMG20B-203ENST00000416526 NCKAP5LQ9HCH0 1330 aa33.63■■■□□ 2.97
HMG20B-203ENST00000416526 ANKRD50Q9ULJ7 1429 aa33.62■■■□□ 2.97
HMG20B-203ENST00000416526 CFAP65Q6ZU64 1925 aaKnown RBP33.62■■■□□ 2.97
HMG20B-203ENST00000416526 NLRP1Q9C000 1473 aa33.61■■■□□ 2.97
HMG20B-203ENST00000416526 ARHGAP31Q2M1Z3 1444 aa33.61■■■□□ 2.97
HMG20B-203ENST00000416526 KANK1Q14678 1352 aa33.6■■■□□ 2.97
HMG20B-203ENST00000416526 ROCK1Q13464 1354 aa33.59■■■□□ 2.97
HMG20B-203ENST00000416526 LMTK2Q8IWU2 1503 aa33.58■■■□□ 2.97
HMG20B-203ENST00000416526 ITGAEP38570 1179 aa33.57■■■□□ 2.96
HMG20B-203ENST00000416526 RRBP1Q9P2E9 1410 aaKnown RBP33.55■■■□□ 2.96
HMG20B-203ENST00000416526 PKD2Q13563 968 aa33.54■■■□□ 2.96
HMG20B-203ENST00000416526 UGGT1Q9NYU2 1555 aa33.53■■■□□ 2.96
HMG20B-203ENST00000416526 CERKQ8TCT0 537 aa33.5■■■□□ 2.95
HMG20B-203ENST00000416526 THEMISQ8N1K5 641 aaPredicted RBP33.48■■■□□ 2.95
HMG20B-203ENST00000416526 FBXO41Q8TF61 875 aa33.48■■■□□ 2.95
HMG20B-203ENST00000416526 EFCAB6Q5THR3 1501 aa33.48■■■□□ 2.95
HMG20B-203ENST00000416526 UNC13BO14795 1591 aa33.47■■■□□ 2.95
HMG20B-203ENST00000416526 POLR1AO95602 1720 aaPredicted RBP33.45■■■□□ 2.95
HMG20B-203ENST00000416526 NEURL4Q96JN8 1562 aa33.45■■■□□ 2.95
HMG20B-203ENST00000416526 LTBP4Q8N2S1 1624 aa33.43■■■□□ 2.94
HMG20B-203ENST00000416526 UBR1Q8IWV7 1749 aa33.42■■■□□ 2.94
HMG20B-203ENST00000416526 ANKLE2Q86XL3 938 aa33.38■■■□□ 2.93
HMG20B-203ENST00000416526 TET3O43151 1660 aa33.38■■■□□ 2.93
HMG20B-203ENST00000416526 SYNMO15061 1565 aa33.38■■■□□ 2.93
HMG20B-203ENST00000416526 NOS1P29475 1434 aa33.37■■■□□ 2.93
HMG20B-203ENST00000416526 PIK3C2BO00750 1634 aa33.35■■■□□ 2.93
HMG20B-203ENST00000416526 ZNF335Q9H4Z2 1342 aaPredicted RBP33.34■■■□□ 2.93
HMG20B-203ENST00000416526 GCC2Q8IWJ2 1684 aa33.33■■■□□ 2.93
HMG20B-203ENST00000416526 RPRD2Q5VT52 1461 aaKnown RBP33.33■■■□□ 2.93
HMG20B-203ENST00000416526 MED14O60244 1454 aa33.32■■■□□ 2.92
HMG20B-203ENST00000416526 IQGAP3Q86VI3 1631 aa33.32■■■□□ 2.92
HMG20B-203ENST00000416526 IDI1Q13907 227 aa33.31■■■□□ 2.92
HMG20B-203ENST00000416526 NPHP4O75161 1426 aaPredicted RBP33.28■■■□□ 2.92
HMG20B-203ENST00000416526 NUP155O75694 1391 aa33.28■■■□□ 2.92
HMG20B-203ENST00000416526 ARHGAP23Q9P227 1491 aa33.28■■■□□ 2.92
HMG20B-203ENST00000416526 SLIT1O75093 1534 aa33.27■■■□□ 2.92
HMG20B-203ENST00000416526 E9PCH4 1651 aa33.26■■■□□ 2.92
HMG20B-203ENST00000416526 NAIPQ13075 1403 aa33.26■■■□□ 2.91
HMG20B-203ENST00000416526 KDM5AP29375 1690 aaKnown RBP33.25■■■□□ 2.91
HMG20B-203ENST00000416526 IQGAP1P46940 1657 aa33.25■■■□□ 2.91
HMG20B-203ENST00000416526 LTKP29376 864 aa33.23■■■□□ 2.91
HMG20B-203ENST00000416526 SLC52A1Q9NWF4 448 aa33.22■■■□□ 2.91
HMG20B-203ENST00000416526 SCAF11Q99590 1463 aaKnown RBP33.22■■■□□ 2.91
HMG20B-203ENST00000416526 STAG3Q9UJ98 1225 aa33.2■■■□□ 2.91
HMG20B-203ENST00000416526 TMEM2Q9UHN6 1383 aa33.2■■■□□ 2.9
HMG20B-203ENST00000416526 ADGRB3O60242 1522 aa33.19■■■□□ 2.9
HMG20B-203ENST00000416526 IQSEC2Q5JU85 1478 aa33.18■■■□□ 2.9
HMG20B-203ENST00000416526 TXNDC2Q86VQ3 553 aa33.18■■■□□ 2.9
HMG20B-203ENST00000416526 HFM1A2PYH4 1435 aa33.16■■■□□ 2.9
HMG20B-203ENST00000416526 EID1Q9Y6B2 187 aa33.12■■■□□ 2.89
HMG20B-203ENST00000416526 MYO5BQ9ULV0 1848 aa33.1■■■□□ 2.89
HMG20B-203ENST00000416526 CPS1P31327 1500 aa33.09■■■□□ 2.89
HMG20B-203ENST00000416526 TMEM131LA2VDJ0 1609 aa33.09■■■□□ 2.89
HMG20B-203ENST00000416526 STRCP1A6NGW2 1772 aa33.06■■■□□ 2.88
HMG20B-203ENST00000416526 ZFYVE9O95405 1425 aa33.02■■■□□ 2.88
HMG20B-203ENST00000416526 SPHKAPQ2M3C7 1700 aa33.01■■■□□ 2.87
HMG20B-203ENST00000416526 RIMS2Q9UQ26 1411 aa32.97■■■□□ 2.87
HMG20B-203ENST00000416526 CHGAP10645 457 aaKnown RBP32.97■■■□□ 2.87
HMG20B-203ENST00000416526 TRIM52Q96A61 297 aa32.96■■■□□ 2.87
HMG20B-203ENST00000416526 UBAP1LF5GYI3 381 aa32.93■■■□□ 2.86
HMG20B-203ENST00000416526 LRRC7Q96NW7 1537 aa32.92■■■□□ 2.86
HMG20B-203ENST00000416526 SLC26A8Q96RN1 970 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms