RNA–Protein interactions for RNA: ENST00000416279.1

LINC01946-201, Transcript of long intergenic non-protein coding RNA 1946, humanhuman

TSL 5 BASIC

Gene LINC01946, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01946-201ENST00000416279 NCOA1Q15788 1441 aa15.13■□□□□ 0.01
LINC01946-201ENST00000416279 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
LINC01946-201ENST00000416279 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
LINC01946-201ENST00000416279 MROH1Q8NDA8 1641 aa15.13■□□□□ 0.01
LINC01946-201ENST00000416279 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
LINC01946-201ENST00000416279 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
LINC01946-201ENST00000416279 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
LINC01946-201ENST00000416279 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
LINC01946-201ENST00000416279 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
LINC01946-201ENST00000416279 ZNF142P52746 1687 aaPredicted RBP15.11■□□□□ 0.01
LINC01946-201ENST00000416279 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
LINC01946-201ENST00000416279 FGD6Q6ZV73 1430 aa15.1■□□□□ 0.01
LINC01946-201ENST00000416279 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
LINC01946-201ENST00000416279 PTPRTO14522 1441 aa15.09■□□□□ 0.01
LINC01946-201ENST00000416279 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
LINC01946-201ENST00000416279 CROCC2H7BZ55 1655 aa15.09■□□□□ 0.01
LINC01946-201ENST00000416279 CERKQ8TCT0 537 aa15.08■□□□□ 0
LINC01946-201ENST00000416279 PZPP20742 1482 aa15.08■□□□□ 0
LINC01946-201ENST00000416279 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
LINC01946-201ENST00000416279 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
LINC01946-201ENST00000416279 ABCC3O15438 1527 aa15.07■□□□□ 0
LINC01946-201ENST00000416279 FAM135AQ9P2D6 1515 aa15.07■□□□□ 0
LINC01946-201ENST00000416279 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
LINC01946-201ENST00000416279 LTBP4Q8N2S1 1624 aa15.06■□□□□ 0
LINC01946-201ENST00000416279 DAPK1P53355 1430 aa15.06■□□□□ 0
LINC01946-201ENST00000416279 SHANK2Q9UPX8 1470 aa15.06■□□□□ 0
LINC01946-201ENST00000416279 EIF2AK4Q9P2K8 1649 aaKnown RBP15.06■□□□□ 0
LINC01946-201ENST00000416279 WASHC2CQ9Y4E1 1318 aa15.05■□□□□ -0
LINC01946-201ENST00000416279 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
LINC01946-201ENST00000416279 A2ML1A8K2U0 1454 aa15.04■□□□□ -0
LINC01946-201ENST00000416279 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
LINC01946-201ENST00000416279 PLA2R1Q13018 1463 aa15.03■□□□□ -0
LINC01946-201ENST00000416279 TNRQ92752 1358 aa15.03■□□□□ -0
LINC01946-201ENST00000416279 KIF15Q9NS87 1388 aa15.03■□□□□ -0
LINC01946-201ENST00000416279 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
LINC01946-201ENST00000416279 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
LINC01946-201ENST00000416279 APLP2Q06481 763 aa15.02■□□□□ -0
LINC01946-201ENST00000416279 CEP152O94986 1710 aa15.02□□□□□ -0.01
LINC01946-201ENST00000416279 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
LINC01946-201ENST00000416279 SPATA31D1Q6ZQQ2 1576 aa15□□□□□ -0.01
LINC01946-201ENST00000416279 NEURL4Q96JN8 1562 aa15□□□□□ -0.01
LINC01946-201ENST00000416279 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
LINC01946-201ENST00000416279 DEPDC5O75140 1603 aa14.99□□□□□ -0.01
LINC01946-201ENST00000416279 PRDM15P57071 1507 aaPredicted RBP14.99□□□□□ -0.01
LINC01946-201ENST00000416279 ZC3H13Q5T200 1668 aaKnown RBP14.99□□□□□ -0.01
LINC01946-201ENST00000416279 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
LINC01946-201ENST00000416279 ERVK-7P63135 1459 aa14.98□□□□□ -0.01
LINC01946-201ENST00000416279 VWDEQ8N2E2 1590 aa14.98□□□□□ -0.01
LINC01946-201ENST00000416279 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
LINC01946-201ENST00000416279 ADGRL2O95490 1459 aa14.97□□□□□ -0.01
LINC01946-201ENST00000416279 PKD2Q13563 968 aa14.97□□□□□ -0.01
LINC01946-201ENST00000416279 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
LINC01946-201ENST00000416279 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
LINC01946-201ENST00000416279 ARHGAP31Q2M1Z3 1444 aa14.95□□□□□ -0.02
LINC01946-201ENST00000416279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.95□□□□□ -0.02
LINC01946-201ENST00000416279 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
LINC01946-201ENST00000416279 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
LINC01946-201ENST00000416279 UGGT1Q9NYU2 1555 aa14.93□□□□□ -0.02
LINC01946-201ENST00000416279 LMTK2Q8IWU2 1503 aa14.92□□□□□ -0.02
LINC01946-201ENST00000416279 PPARGC1BQ86YN6 1023 aaKnown RBP14.92□□□□□ -0.02
LINC01946-201ENST00000416279 MED14O60244 1454 aa14.91□□□□□ -0.02
LINC01946-201ENST00000416279 FAM50AQ14320 339 aaKnown RBP14.91□□□□□ -0.02
LINC01946-201ENST00000416279 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
LINC01946-201ENST00000416279 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
LINC01946-201ENST00000416279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
LINC01946-201ENST00000416279 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
LINC01946-201ENST00000416279 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
LINC01946-201ENST00000416279 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
LINC01946-201ENST00000416279 SYNMO15061 1565 aa14.87□□□□□ -0.03
LINC01946-201ENST00000416279 ANKLE2Q86XL3 938 aa14.87□□□□□ -0.03
LINC01946-201ENST00000416279 ARHGAP23Q9P227 1491 aa14.87□□□□□ -0.03
LINC01946-201ENST00000416279 STRCP1A6NGW2 1772 aa14.86□□□□□ -0.03
LINC01946-201ENST00000416279 NOS1P29475 1434 aa14.86□□□□□ -0.03
LINC01946-201ENST00000416279 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
LINC01946-201ENST00000416279 LTKP29376 864 aa14.86□□□□□ -0.03
LINC01946-201ENST00000416279 PIK3C2BO00750 1634 aa14.85□□□□□ -0.03
LINC01946-201ENST00000416279 NPHP4O75161 1426 aaPredicted RBP14.85□□□□□ -0.03
LINC01946-201ENST00000416279 EFCAB6Q5THR3 1501 aa14.85□□□□□ -0.03
LINC01946-201ENST00000416279 SLIT1O75093 1534 aa14.84□□□□□ -0.03
LINC01946-201ENST00000416279 IDI1Q13907 227 aa14.84□□□□□ -0.03
LINC01946-201ENST00000416279 IQGAP1P46940 1657 aa14.83□□□□□ -0.04
LINC01946-201ENST00000416279 ROCK1Q13464 1354 aa14.83□□□□□ -0.04
LINC01946-201ENST00000416279 ALKQ9UM73 1620 aa14.82□□□□□ -0.04
LINC01946-201ENST00000416279 KANK1Q14678 1352 aa14.82□□□□□ -0.04
LINC01946-201ENST00000416279 UNC13BO14795 1591 aa14.81□□□□□ -0.04
LINC01946-201ENST00000416279 TET3O43151 1660 aa14.79□□□□□ -0.04
LINC01946-201ENST00000416279 SCAF11Q99590 1463 aaKnown RBP14.79□□□□□ -0.04
LINC01946-201ENST00000416279 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
LINC01946-201ENST00000416279 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
LINC01946-201ENST00000416279 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
LINC01946-201ENST00000416279 CPS1P31327 1500 aa14.77□□□□□ -0.04
LINC01946-201ENST00000416279 TXNDC2Q86VQ3 553 aa14.77□□□□□ -0.05
LINC01946-201ENST00000416279 MYO5BQ9ULV0 1848 aa14.77□□□□□ -0.05
LINC01946-201ENST00000416279 E9PCH4 1651 aa14.77□□□□□ -0.05
LINC01946-201ENST00000416279 ITGAEP38570 1179 aa14.76□□□□□ -0.05
LINC01946-201ENST00000416279 GCC2Q8IWJ2 1684 aa14.76□□□□□ -0.05
LINC01946-201ENST00000416279 LRRC7Q96NW7 1537 aa14.76□□□□□ -0.05
LINC01946-201ENST00000416279 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
LINC01946-201ENST00000416279 IQGAP3Q86VI3 1631 aa14.75□□□□□ -0.05
LINC01946-201ENST00000416279 UBAP1LF5GYI3 381 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms