RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
COL12A1-203ENST00000416123 GZF1Q9H116 711 aaPredicted RBP13.37□□□□□ -0.27
COL12A1-203ENST00000416123 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
COL12A1-203ENST00000416123 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
COL12A1-203ENST00000416123 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
COL12A1-203ENST00000416123 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
COL12A1-203ENST00000416123 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
COL12A1-203ENST00000416123 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
COL12A1-203ENST00000416123 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
COL12A1-203ENST00000416123 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
COL12A1-203ENST00000416123 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
COL12A1-203ENST00000416123 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
COL12A1-203ENST00000416123 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
COL12A1-203ENST00000416123 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
COL12A1-203ENST00000416123 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
COL12A1-203ENST00000416123 MSH5O43196 834 aa13.33□□□□□ -0.27
COL12A1-203ENST00000416123 ERICH6BQ5W0A0 696 aa13.33□□□□□ -0.27
COL12A1-203ENST00000416123 FAM69CQ0P6D2 419 aa13.33□□□□□ -0.28
COL12A1-203ENST00000416123 CENPJQ9HC77 1338 aaPredicted RBP13.33□□□□□ -0.28
COL12A1-203ENST00000416123 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
COL12A1-203ENST00000416123 COG3Q96JB2 828 aa13.32□□□□□ -0.28
COL12A1-203ENST00000416123 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
COL12A1-203ENST00000416123 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
COL12A1-203ENST00000416123 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
COL12A1-203ENST00000416123 PLIN1O60240 522 aa13.31□□□□□ -0.28
COL12A1-203ENST00000416123 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
COL12A1-203ENST00000416123 FOXD4L5Q5VV16 416 aaPredicted RBP13.3□□□□□ -0.28
COL12A1-203ENST00000416123 FOXD4L4Q8WXT5 416 aaPredicted RBP13.3□□□□□ -0.28
COL12A1-203ENST00000416123 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
COL12A1-203ENST00000416123 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
COL12A1-203ENST00000416123 NRDCO43847 1150 aa13.3□□□□□ -0.28
COL12A1-203ENST00000416123 PSME1Q06323 249 aa13.3□□□□□ -0.28
COL12A1-203ENST00000416123 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
COL12A1-203ENST00000416123 EVC2Q86UK5 1308 aa13.3□□□□□ -0.28
COL12A1-203ENST00000416123 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
COL12A1-203ENST00000416123 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
COL12A1-203ENST00000416123 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
COL12A1-203ENST00000416123 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
COL12A1-203ENST00000416123 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
COL12A1-203ENST00000416123 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
COL12A1-203ENST00000416123 MSNP26038 577 aaKnown RBP13.28□□□□□ -0.28
COL12A1-203ENST00000416123 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
COL12A1-203ENST00000416123 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
COL12A1-203ENST00000416123 HMMRO75330 724 aa13.28□□□□□ -0.28
COL12A1-203ENST00000416123 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
COL12A1-203ENST00000416123 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
COL12A1-203ENST00000416123 CGNL1Q0VF96 1302 aa13.27□□□□□ -0.28
COL12A1-203ENST00000416123 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.28
COL12A1-203ENST00000416123 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
COL12A1-203ENST00000416123 USP47Q96K76 1375 aa13.26□□□□□ -0.29
COL12A1-203ENST00000416123 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
COL12A1-203ENST00000416123 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
COL12A1-203ENST00000416123 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
COL12A1-203ENST00000416123 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
COL12A1-203ENST00000416123 CHAF1AQ13111 956 aaPredicted RBP13.25□□□□□ -0.29
COL12A1-203ENST00000416123 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
COL12A1-203ENST00000416123 PDE4CQ08493 712 aa13.24□□□□□ -0.29
COL12A1-203ENST00000416123 GBP4Q96PP9 640 aa13.24□□□□□ -0.29
COL12A1-203ENST00000416123 TEFQ10587 303 aa13.23□□□□□ -0.29
COL12A1-203ENST00000416123 RASSF8Q8NHQ8 419 aa13.23□□□□□ -0.29
COL12A1-203ENST00000416123 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
COL12A1-203ENST00000416123 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
COL12A1-203ENST00000416123 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
COL12A1-203ENST00000416123 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
COL12A1-203ENST00000416123 DEKP35659 375 aaKnown RBP13.22□□□□□ -0.29
COL12A1-203ENST00000416123 ARID3AQ99856 593 aa13.22□□□□□ -0.29
COL12A1-203ENST00000416123 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
COL12A1-203ENST00000416123 HMOX1P09601 288 aa13.21□□□□□ -0.29
COL12A1-203ENST00000416123 RAD21O60216 631 aa13.21□□□□□ -0.29
COL12A1-203ENST00000416123 L1TD1Q5T7N2 865 aaKnown RBP13.2□□□□□ -0.3
COL12A1-203ENST00000416123 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
COL12A1-203ENST00000416123 KIAA2012Q0VF49 1180 aa13.2□□□□□ -0.3
COL12A1-203ENST00000416123 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
COL12A1-203ENST00000416123 PHLDB1Q86UU1 1377 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 C9orf78Q9NZ63 289 aaPredicted RBP13.19□□□□□ -0.3
COL12A1-203ENST00000416123 APAF1O14727 1248 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 CUX1P39880 1505 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
COL12A1-203ENST00000416123 ATF3P18847 181 aa13.18□□□□□ -0.3
COL12A1-203ENST00000416123 RIPK4P57078 832 aa13.18□□□□□ -0.3
COL12A1-203ENST00000416123 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
COL12A1-203ENST00000416123 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
COL12A1-203ENST00000416123 NESP48681 1621 aa13.17□□□□□ -0.3
COL12A1-203ENST00000416123 DIAPH1O60610 1272 aaKnown RBP13.17□□□□□ -0.3
COL12A1-203ENST00000416123 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
COL12A1-203ENST00000416123 KIF16BQ96L93 1317 aa13.17□□□□□ -0.3
COL12A1-203ENST00000416123 MARCH6O60337 910 aa13.16□□□□□ -0.3
COL12A1-203ENST00000416123 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
COL12A1-203ENST00000416123 IGF1RP08069 1367 aa13.16□□□□□ -0.3
COL12A1-203ENST00000416123 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
COL12A1-203ENST00000416123 USP35Q9P2H5 1018 aa13.15□□□□□ -0.3
COL12A1-203ENST00000416123 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
COL12A1-203ENST00000416123 NEXNQ0ZGT2 675 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 NOC3LQ8WTT2 800 aaKnown RBP13.14□□□□□ -0.31
COL12A1-203ENST00000416123 H3BQV1 296 aa13.14□□□□□ -0.31
COL12A1-203ENST00000416123 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms