RNA–Protein interactions for RNA: ENST00000416104.5

LINC00222-202, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best) BASIC

Gene LINC00222, Length 1,785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-202ENST00000416104 STRCQ7RTU9 1775 aa17.88■□□□□ 0.45
LINC00222-202ENST00000416104 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
LINC00222-202ENST00000416104 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
LINC00222-202ENST00000416104 ABCC5O15440 1437 aa17.87■□□□□ 0.45
LINC00222-202ENST00000416104 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
LINC00222-202ENST00000416104 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
LINC00222-202ENST00000416104 TNRQ92752 1358 aa17.86■□□□□ 0.45
LINC00222-202ENST00000416104 CAMSAP1Q5T5Y3 1602 aa17.85■□□□□ 0.45
LINC00222-202ENST00000416104 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
LINC00222-202ENST00000416104 PZPP20742 1482 aa17.85■□□□□ 0.45
LINC00222-202ENST00000416104 TCOF1Q13428 1488 aaKnown RBP17.85■□□□□ 0.45
LINC00222-202ENST00000416104 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
LINC00222-202ENST00000416104 PKD2Q13563 968 aa17.85■□□□□ 0.45
LINC00222-202ENST00000416104 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
LINC00222-202ENST00000416104 DAPK1P53355 1430 aa17.84■□□□□ 0.45
LINC00222-202ENST00000416104 NCKAP5LQ9HCH0 1330 aa17.84■□□□□ 0.45
LINC00222-202ENST00000416104 MYO3AQ8NEV4 1616 aa17.84■□□□□ 0.45
LINC00222-202ENST00000416104 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.44
LINC00222-202ENST00000416104 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
LINC00222-202ENST00000416104 EIF2AK4Q9P2K8 1649 aaKnown RBP17.82■□□□□ 0.44
LINC00222-202ENST00000416104 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
LINC00222-202ENST00000416104 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
LINC00222-202ENST00000416104 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
LINC00222-202ENST00000416104 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
LINC00222-202ENST00000416104 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
LINC00222-202ENST00000416104 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
LINC00222-202ENST00000416104 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
LINC00222-202ENST00000416104 DNMT1P26358 1616 aaKnown RBP17.79■□□□□ 0.44
LINC00222-202ENST00000416104 THEMISQ8N1K5 641 aaPredicted RBP17.79■□□□□ 0.44
LINC00222-202ENST00000416104 ABCC3O15438 1527 aa17.78■□□□□ 0.44
LINC00222-202ENST00000416104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.44
LINC00222-202ENST00000416104 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
LINC00222-202ENST00000416104 CROCC2H7BZ55 1655 aa17.77■□□□□ 0.44
LINC00222-202ENST00000416104 ZC3H13Q5T200 1668 aaKnown RBP17.76■□□□□ 0.43
LINC00222-202ENST00000416104 KANK1Q14678 1352 aa17.76■□□□□ 0.43
LINC00222-202ENST00000416104 ANKLE2Q86XL3 938 aa17.75■□□□□ 0.43
LINC00222-202ENST00000416104 MROH1Q8NDA8 1641 aa17.73■□□□□ 0.43
LINC00222-202ENST00000416104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC00222-202ENST00000416104 ERVK-7P63135 1459 aa17.71■□□□□ 0.43
LINC00222-202ENST00000416104 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
LINC00222-202ENST00000416104 SPATA31D1Q6ZQQ2 1576 aa17.71■□□□□ 0.43
LINC00222-202ENST00000416104 UGGT1Q9NYU2 1555 aa17.71■□□□□ 0.43
LINC00222-202ENST00000416104 PRDM15P57071 1507 aaPredicted RBP17.7■□□□□ 0.42
LINC00222-202ENST00000416104 ZNF335Q9H4Z2 1342 aaPredicted RBP17.7■□□□□ 0.42
LINC00222-202ENST00000416104 LTBP4Q8N2S1 1624 aa17.7■□□□□ 0.42
LINC00222-202ENST00000416104 ADGRL2O95490 1459 aa17.7■□□□□ 0.42
LINC00222-202ENST00000416104 PPARGC1BQ86YN6 1023 aaKnown RBP17.67■□□□□ 0.42
LINC00222-202ENST00000416104 CEP152O94986 1710 aa17.67■□□□□ 0.42
LINC00222-202ENST00000416104 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
LINC00222-202ENST00000416104 IQSEC2Q5JU85 1478 aa17.66■□□□□ 0.42
LINC00222-202ENST00000416104 DEPDC5O75140 1603 aa17.65■□□□□ 0.42
LINC00222-202ENST00000416104 LMTK2Q8IWU2 1503 aa17.63■□□□□ 0.41
LINC00222-202ENST00000416104 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
LINC00222-202ENST00000416104 NPHP4O75161 1426 aaPredicted RBP17.62■□□□□ 0.41
LINC00222-202ENST00000416104 MED14O60244 1454 aa17.62■□□□□ 0.41
LINC00222-202ENST00000416104 ITGAEP38570 1179 aa17.61■□□□□ 0.41
LINC00222-202ENST00000416104 ROCK1Q13464 1354 aa17.61■□□□□ 0.41
LINC00222-202ENST00000416104 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
LINC00222-202ENST00000416104 VWDEQ8N2E2 1590 aa17.61■□□□□ 0.41
LINC00222-202ENST00000416104 NEURL4Q96JN8 1562 aa17.61■□□□□ 0.41
LINC00222-202ENST00000416104 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
LINC00222-202ENST00000416104 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
LINC00222-202ENST00000416104 CFAP65Q6ZU64 1925 aaKnown RBP17.59■□□□□ 0.41
LINC00222-202ENST00000416104 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
LINC00222-202ENST00000416104 IDI1Q13907 227 aa17.58■□□□□ 0.4
LINC00222-202ENST00000416104 SLC52A1Q9NWF4 448 aa17.57■□□□□ 0.4
LINC00222-202ENST00000416104 CPS1P31327 1500 aa17.55■□□□□ 0.4
LINC00222-202ENST00000416104 UBR1Q8IWV7 1749 aa17.55■□□□□ 0.4
LINC00222-202ENST00000416104 LTKP29376 864 aa17.55■□□□□ 0.4
LINC00222-202ENST00000416104 EFCAB6Q5THR3 1501 aa17.55■□□□□ 0.4
LINC00222-202ENST00000416104 NOS1P29475 1434 aa17.55■□□□□ 0.4
LINC00222-202ENST00000416104 SCAF11Q99590 1463 aaKnown RBP17.54■□□□□ 0.4
LINC00222-202ENST00000416104 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
LINC00222-202ENST00000416104 ARHGAP23Q9P227 1491 aa17.53■□□□□ 0.4
LINC00222-202ENST00000416104 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
LINC00222-202ENST00000416104 SLIT1O75093 1534 aa17.53■□□□□ 0.4
LINC00222-202ENST00000416104 IQGAP1P46940 1657 aa17.52■□□□□ 0.4
LINC00222-202ENST00000416104 TOM1O60784 492 aa17.51■□□□□ 0.39
LINC00222-202ENST00000416104 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
LINC00222-202ENST00000416104 NUP155O75694 1391 aa17.5■□□□□ 0.39
LINC00222-202ENST00000416104 SYNMO15061 1565 aa17.49■□□□□ 0.39
LINC00222-202ENST00000416104 UNC13BO14795 1591 aa17.49■□□□□ 0.39
LINC00222-202ENST00000416104 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
LINC00222-202ENST00000416104 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
LINC00222-202ENST00000416104 TET3O43151 1660 aa17.48■□□□□ 0.39
LINC00222-202ENST00000416104 KDM5AP29375 1690 aaKnown RBP17.47■□□□□ 0.39
LINC00222-202ENST00000416104 BCANQ96GW7 911 aa17.45■□□□□ 0.38
LINC00222-202ENST00000416104 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
LINC00222-202ENST00000416104 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
LINC00222-202ENST00000416104 ADGRB3O60242 1522 aa17.45■□□□□ 0.38
LINC00222-202ENST00000416104 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
LINC00222-202ENST00000416104 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
LINC00222-202ENST00000416104 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
LINC00222-202ENST00000416104 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
LINC00222-202ENST00000416104 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
LINC00222-202ENST00000416104 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
LINC00222-202ENST00000416104 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00222-202ENST00000416104 KCNA6P17658 529 aa17.4■□□□□ 0.38
LINC00222-202ENST00000416104 RIMS2Q9UQ26 1411 aa17.39■□□□□ 0.37
LINC00222-202ENST00000416104 E9PCH4 1651 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms