RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
CTHRC1-202ENST00000415886 TNRQ92752 1358 aa21.27■■□□□ 1
CTHRC1-202ENST00000415886 FBXO31Q5XUX0 539 aaPredicted RBP21.27■■□□□ 1
CTHRC1-202ENST00000415886 KDM5DQ9BY66 1539 aa21.26■□□□□ 0.99
CTHRC1-202ENST00000415886 KIF3BO15066 747 aa21.26■□□□□ 0.99
CTHRC1-202ENST00000415886 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
CTHRC1-202ENST00000415886 PZPP20742 1482 aa21.25■□□□□ 0.99
CTHRC1-202ENST00000415886 CAMSAP2Q08AD1 1489 aa21.24■□□□□ 0.99
CTHRC1-202ENST00000415886 CPS1P31327 1500 aa21.22■□□□□ 0.99
CTHRC1-202ENST00000415886 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
CTHRC1-202ENST00000415886 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
CTHRC1-202ENST00000415886 NCOA2Q15596 1464 aa21.21■□□□□ 0.99
CTHRC1-202ENST00000415886 SHANK2Q9UPX8 1470 aa21.2■□□□□ 0.98
CTHRC1-202ENST00000415886 PIP4K2BP78356 416 aa21.2■□□□□ 0.98
CTHRC1-202ENST00000415886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.2■□□□□ 0.98
CTHRC1-202ENST00000415886 HSPA1LP34931 641 aa21.19■□□□□ 0.98
CTHRC1-202ENST00000415886 WASHC2CQ9Y4E1 1318 aa21.19■□□□□ 0.98
CTHRC1-202ENST00000415886 MED1Q15648 1581 aaPredicted RBP21.17■□□□□ 0.98
CTHRC1-202ENST00000415886 VWDEQ8N2E2 1590 aa21.17■□□□□ 0.98
CTHRC1-202ENST00000415886 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
CTHRC1-202ENST00000415886 UGGT1Q9NYU2 1555 aa21.15■□□□□ 0.98
CTHRC1-202ENST00000415886 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
CTHRC1-202ENST00000415886 TOM1O60784 492 aa21.15■□□□□ 0.98
CTHRC1-202ENST00000415886 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
CTHRC1-202ENST00000415886 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.98
CTHRC1-202ENST00000415886 RSPH4AQ5TD94 716 aa21.14■□□□□ 0.97
CTHRC1-202ENST00000415886 THEMISQ8N1K5 641 aaPredicted RBP21.13■□□□□ 0.97
CTHRC1-202ENST00000415886 DEPDC5O75140 1603 aa21.13■□□□□ 0.97
CTHRC1-202ENST00000415886 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
CTHRC1-202ENST00000415886 MED14O60244 1454 aa21.12■□□□□ 0.97
CTHRC1-202ENST00000415886 ALKQ9UM73 1620 aa21.11■□□□□ 0.97
CTHRC1-202ENST00000415886 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
CTHRC1-202ENST00000415886 IQGAP1P46940 1657 aa21.09■□□□□ 0.97
CTHRC1-202ENST00000415886 ABCC3O15438 1527 aa21.09■□□□□ 0.97
CTHRC1-202ENST00000415886 TSPY4P0CV99 314 aa21.08■□□□□ 0.97
CTHRC1-202ENST00000415886 TSPY10P0CW01 314 aa21.08■□□□□ 0.97
CTHRC1-202ENST00000415886 ZC3H13Q5T200 1668 aaKnown RBP21.07■□□□□ 0.96
CTHRC1-202ENST00000415886 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
CTHRC1-202ENST00000415886 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
CTHRC1-202ENST00000415886 ERVK-7P63135 1459 aa21.04■□□□□ 0.96
CTHRC1-202ENST00000415886 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
CTHRC1-202ENST00000415886 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
CTHRC1-202ENST00000415886 EIF2AK4Q9P2K8 1649 aaKnown RBP21.03■□□□□ 0.96
CTHRC1-202ENST00000415886 LRRC7Q96NW7 1537 aa21.02■□□□□ 0.96
CTHRC1-202ENST00000415886 CEP152O94986 1710 aa21.01■□□□□ 0.95
CTHRC1-202ENST00000415886 SYNMO15061 1565 aa21.01■□□□□ 0.95
CTHRC1-202ENST00000415886 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
CTHRC1-202ENST00000415886 UBR1Q8IWV7 1749 aa20.98■□□□□ 0.95
CTHRC1-202ENST00000415886 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
CTHRC1-202ENST00000415886 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
CTHRC1-202ENST00000415886 SCAF11Q99590 1463 aaKnown RBP20.95■□□□□ 0.94
CTHRC1-202ENST00000415886 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
CTHRC1-202ENST00000415886 MYOM3Q5VTT5 1437 aa20.94■□□□□ 0.94
CTHRC1-202ENST00000415886 DUOX2Q9NRD8 1548 aa20.94■□□□□ 0.94
CTHRC1-202ENST00000415886 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
CTHRC1-202ENST00000415886 CFAP65Q6ZU64 1925 aaKnown RBP20.93■□□□□ 0.94
CTHRC1-202ENST00000415886 LTKP29376 864 aa20.91■□□□□ 0.94
CTHRC1-202ENST00000415886 PRDM15P57071 1507 aaPredicted RBP20.91■□□□□ 0.94
CTHRC1-202ENST00000415886 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
CTHRC1-202ENST00000415886 SLIT1O75093 1534 aa20.9■□□□□ 0.94
CTHRC1-202ENST00000415886 TXNDC2Q86VQ3 553 aa20.88■□□□□ 0.93
CTHRC1-202ENST00000415886 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
CTHRC1-202ENST00000415886 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
CTHRC1-202ENST00000415886 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
CTHRC1-202ENST00000415886 KIF15Q9NS87 1388 aa20.87■□□□□ 0.93
CTHRC1-202ENST00000415886 CROCC2H7BZ55 1655 aa20.86■□□□□ 0.93
CTHRC1-202ENST00000415886 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
CTHRC1-202ENST00000415886 ERBINQ96RT1 1412 aa20.85■□□□□ 0.93
CTHRC1-202ENST00000415886 ABCC5O15440 1437 aa20.84■□□□□ 0.93
CTHRC1-202ENST00000415886 RRP7BPQ9NSQ0 103 aa20.83■□□□□ 0.93
CTHRC1-202ENST00000415886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
CTHRC1-202ENST00000415886 EID1Q9Y6B2 187 aa20.82■□□□□ 0.92
CTHRC1-202ENST00000415886 PTPN23Q9H3S7 1636 aa20.81■□□□□ 0.92
CTHRC1-202ENST00000415886 TMEM2Q9UHN6 1383 aa20.81■□□□□ 0.92
CTHRC1-202ENST00000415886 RGS17Q9UGC6 210 aaPredicted RBP20.79■□□□□ 0.92
CTHRC1-202ENST00000415886 DAPK1P53355 1430 aa20.78■□□□□ 0.92
CTHRC1-202ENST00000415886 EFCAB6Q5THR3 1501 aa20.78■□□□□ 0.92
CTHRC1-202ENST00000415886 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
CTHRC1-202ENST00000415886 TMEM94Q12767 1356 aa20.76■□□□□ 0.91
CTHRC1-202ENST00000415886 KANK1Q14678 1352 aa20.76■□□□□ 0.91
CTHRC1-202ENST00000415886 KDM5AP29375 1690 aaKnown RBP20.75■□□□□ 0.91
CTHRC1-202ENST00000415886 FAM135BQ49AJ0 1406 aa20.75■□□□□ 0.91
CTHRC1-202ENST00000415886 LMTK2Q8IWU2 1503 aa20.74■□□□□ 0.91
CTHRC1-202ENST00000415886 IDI1Q13907 227 aa20.74■□□□□ 0.91
CTHRC1-202ENST00000415886 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
CTHRC1-202ENST00000415886 TET3O43151 1660 aa20.72■□□□□ 0.91
CTHRC1-202ENST00000415886 ROBO1Q9Y6N7 1651 aa20.72■□□□□ 0.91
CTHRC1-202ENST00000415886 FGD6Q6ZV73 1430 aa20.71■□□□□ 0.91
CTHRC1-202ENST00000415886 KCNA6P17658 529 aa20.71■□□□□ 0.91
CTHRC1-202ENST00000415886 SLC26A8Q96RN1 970 aa20.71■□□□□ 0.91
CTHRC1-202ENST00000415886 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
CTHRC1-202ENST00000415886 ADGRB3O60242 1522 aa20.71■□□□□ 0.91
CTHRC1-202ENST00000415886 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
CTHRC1-202ENST00000415886 NOS1P29475 1434 aa20.69■□□□□ 0.9
CTHRC1-202ENST00000415886 NWD1Q149M9 1564 aa20.68■□□□□ 0.9
CTHRC1-202ENST00000415886 PROSER2Q86WR7 435 aaPredicted RBP20.68■□□□□ 0.9
CTHRC1-202ENST00000415886 NKTRP30414 1462 aaKnown RBP20.67■□□□□ 0.9
CTHRC1-202ENST00000415886 POTEAQ6S8J7 498 aa20.66■□□□□ 0.9
CTHRC1-202ENST00000415886 APLP2Q06481 763 aa20.65■□□□□ 0.9
CTHRC1-202ENST00000415886 BCANQ96GW7 911 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 522.1 ms