RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
UBA3-203ENST00000415609 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
UBA3-203ENST00000415609 CCDC184Q52MB2 194 aa17.04■□□□□ 0.32
UBA3-203ENST00000415609 BCANQ96GW7 911 aa17.04■□□□□ 0.32
UBA3-203ENST00000415609 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
UBA3-203ENST00000415609 ERBINQ96RT1 1412 aa17.02■□□□□ 0.32
UBA3-203ENST00000415609 ARID4BQ4LE39 1312 aaPredicted RBP17.01■□□□□ 0.31
UBA3-203ENST00000415609 TRAPPC8Q9Y2L5 1435 aa17■□□□□ 0.31
UBA3-203ENST00000415609 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
UBA3-203ENST00000415609 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
UBA3-203ENST00000415609 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
UBA3-203ENST00000415609 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
UBA3-203ENST00000415609 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
UBA3-203ENST00000415609 TRPM1Q7Z4N2 1603 aa16.97■□□□□ 0.31
UBA3-203ENST00000415609 RGL3Q3MIN7 710 aa16.97■□□□□ 0.31
UBA3-203ENST00000415609 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
UBA3-203ENST00000415609 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
UBA3-203ENST00000415609 ST20-MTHFSA0A0A6YYL1 179 aa16.96■□□□□ 0.31
UBA3-203ENST00000415609 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
UBA3-203ENST00000415609 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.3
UBA3-203ENST00000415609 A2MP01023 1474 aa16.95■□□□□ 0.3
UBA3-203ENST00000415609 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
UBA3-203ENST00000415609 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
UBA3-203ENST00000415609 ATP10AO60312 1499 aa16.92■□□□□ 0.3
UBA3-203ENST00000415609 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
UBA3-203ENST00000415609 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
UBA3-203ENST00000415609 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
UBA3-203ENST00000415609 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
UBA3-203ENST00000415609 FANCAO15360 1455 aa16.9■□□□□ 0.3
UBA3-203ENST00000415609 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.29
UBA3-203ENST00000415609 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
UBA3-203ENST00000415609 LAMC1P11047 1609 aa16.88■□□□□ 0.29
UBA3-203ENST00000415609 E9PCH4 1651 aa16.88■□□□□ 0.29
UBA3-203ENST00000415609 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
UBA3-203ENST00000415609 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
UBA3-203ENST00000415609 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
UBA3-203ENST00000415609 INO80Q9ULG1 1556 aaPredicted RBP16.86■□□□□ 0.29
UBA3-203ENST00000415609 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
UBA3-203ENST00000415609 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
UBA3-203ENST00000415609 ADGRL1O94910 1474 aa16.85■□□□□ 0.29
UBA3-203ENST00000415609 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
UBA3-203ENST00000415609 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
UBA3-203ENST00000415609 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
UBA3-203ENST00000415609 TRPM2O94759 1503 aa16.83■□□□□ 0.28
UBA3-203ENST00000415609 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
UBA3-203ENST00000415609 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
UBA3-203ENST00000415609 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
UBA3-203ENST00000415609 TET3O43151 1660 aa16.81■□□□□ 0.28
UBA3-203ENST00000415609 KANK1Q14678 1352 aa16.81■□□□□ 0.28
UBA3-203ENST00000415609 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
UBA3-203ENST00000415609 RNF17Q9BXT8 1623 aaKnown RBP16.81■□□□□ 0.28
UBA3-203ENST00000415609 TMC1Q8TDI8 760 aa16.8■□□□□ 0.28
UBA3-203ENST00000415609 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
UBA3-203ENST00000415609 CEP152O94986 1710 aa16.8■□□□□ 0.28
UBA3-203ENST00000415609 CLTCL1P53675 1640 aa16.79■□□□□ 0.28
UBA3-203ENST00000415609 RALBP1Q15311 655 aa16.79■□□□□ 0.28
UBA3-203ENST00000415609 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
UBA3-203ENST00000415609 MADDQ8WXG6 1647 aa16.78■□□□□ 0.28
UBA3-203ENST00000415609 PTPRTO14522 1441 aa16.78■□□□□ 0.28
UBA3-203ENST00000415609 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
UBA3-203ENST00000415609 KIF3BO15066 747 aa16.77■□□□□ 0.28
UBA3-203ENST00000415609 VWDEQ8N2E2 1590 aa16.76■□□□□ 0.27
UBA3-203ENST00000415609 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
UBA3-203ENST00000415609 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
UBA3-203ENST00000415609 TESK2Q96S53 571 aa16.76■□□□□ 0.27
UBA3-203ENST00000415609 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBA3-203ENST00000415609 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
UBA3-203ENST00000415609 TMF1P82094 1093 aa16.74■□□□□ 0.27
UBA3-203ENST00000415609 MROH1Q8NDA8 1641 aa16.73■□□□□ 0.27
UBA3-203ENST00000415609 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
UBA3-203ENST00000415609 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
UBA3-203ENST00000415609 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
UBA3-203ENST00000415609 ZNF518AQ6AHZ1 1483 aa16.72■□□□□ 0.27
UBA3-203ENST00000415609 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
UBA3-203ENST00000415609 PARD3Q8TEW0 1356 aa16.72■□□□□ 0.27
UBA3-203ENST00000415609 LRPPRCP42704 1394 aaKnown RBP16.7■□□□□ 0.26
UBA3-203ENST00000415609 CFAP74Q9C0B2 1584 aa16.7■□□□□ 0.26
UBA3-203ENST00000415609 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
UBA3-203ENST00000415609 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
UBA3-203ENST00000415609 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
UBA3-203ENST00000415609 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
UBA3-203ENST00000415609 EFCAB6Q5THR3 1501 aa16.69■□□□□ 0.26
UBA3-203ENST00000415609 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
UBA3-203ENST00000415609 PANK3Q9H999 370 aa16.68■□□□□ 0.26
UBA3-203ENST00000415609 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
UBA3-203ENST00000415609 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
UBA3-203ENST00000415609 UGGT1Q9NYU2 1555 aa16.67■□□□□ 0.26
UBA3-203ENST00000415609 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
UBA3-203ENST00000415609 WASHC2CQ9Y4E1 1318 aa16.67■□□□□ 0.26
UBA3-203ENST00000415609 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
UBA3-203ENST00000415609 PPRC1Q5VV67 1664 aaKnown RBP16.66■□□□□ 0.26
UBA3-203ENST00000415609 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
UBA3-203ENST00000415609 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
UBA3-203ENST00000415609 KIF1BO60333 1816 aa16.65■□□□□ 0.26
UBA3-203ENST00000415609 KIAA1210Q9ULL0 1709 aa16.64■□□□□ 0.25
UBA3-203ENST00000415609 LMTK2Q8IWU2 1503 aa16.63■□□□□ 0.25
UBA3-203ENST00000415609 EIF3AQ14152 1382 aaKnown RBP16.63■□□□□ 0.25
UBA3-203ENST00000415609 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
UBA3-203ENST00000415609 MAP3K4Q9Y6R4 1608 aa16.62■□□□□ 0.25
UBA3-203ENST00000415609 MYOM2P54296 1465 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms