RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 FGD6Q6ZV73 1430 aa38.89■■■■□ 3.82
HLA-C-204ENST00000415537 CAMSAP1Q5T5Y3 1602 aa38.87■■■■□ 3.81
HLA-C-204ENST00000415537 ZNF142P52746 1687 aaPredicted RBP38.87■■■■□ 3.81
HLA-C-204ENST00000415537 CROCC2H7BZ55 1655 aa38.86■■■■□ 3.81
HLA-C-204ENST00000415537 EIF2AK4Q9P2K8 1649 aaKnown RBP38.85■■■■□ 3.81
HLA-C-204ENST00000415537 NCOA1Q15788 1441 aa38.85■■■■□ 3.81
HLA-C-204ENST00000415537 CEP170BQ9Y4F5 1589 aaPredicted RBP38.83■■■■□ 3.81
HLA-C-204ENST00000415537 PTPRTO14522 1441 aa38.83■■■■□ 3.81
HLA-C-204ENST00000415537 ABCC5O15440 1437 aa38.83■■■■□ 3.81
HLA-C-204ENST00000415537 RNF17Q9BXT8 1623 aaKnown RBP38.83■■■■□ 3.81
HLA-C-204ENST00000415537 SHANK2Q9UPX8 1470 aa38.82■■■■□ 3.81
HLA-C-204ENST00000415537 DUOX2Q9NRD8 1548 aa38.82■■■■□ 3.8
HLA-C-204ENST00000415537 TCOF1Q13428 1488 aaKnown RBP38.81■■■■□ 3.8
HLA-C-204ENST00000415537 CERKQ8TCT0 537 aa38.81■■■■□ 3.8
HLA-C-204ENST00000415537 PZPP20742 1482 aa38.8■■■■□ 3.8
HLA-C-204ENST00000415537 DAPK1P53355 1430 aa38.8■■■■□ 3.8
HLA-C-204ENST00000415537 DNMT1P26358 1616 aaKnown RBP38.79■■■■□ 3.8
HLA-C-204ENST00000415537 FBXO31Q5XUX0 539 aaPredicted RBP38.78■■■■□ 3.8
HLA-C-204ENST00000415537 TNRQ92752 1358 aa38.76■■■■□ 3.8
HLA-C-204ENST00000415537 KIF15Q9NS87 1388 aa38.76■■■■□ 3.8
HLA-C-204ENST00000415537 ZC3H13Q5T200 1668 aaKnown RBP38.75■■■■□ 3.79
HLA-C-204ENST00000415537 RRP7BPQ9NSQ0 103 aa38.75■■■■□ 3.79
HLA-C-204ENST00000415537 A2ML1A8K2U0 1454 aa38.73■■■■□ 3.79
HLA-C-204ENST00000415537 PLA2R1Q13018 1463 aa38.72■■■■□ 3.79
HLA-C-204ENST00000415537 NCKAP5LQ9HCH0 1330 aa38.71■■■■□ 3.79
HLA-C-204ENST00000415537 ABCC3O15438 1527 aa38.69■■■■□ 3.78
HLA-C-204ENST00000415537 PKD2Q13563 968 aa38.69■■■■□ 3.78
HLA-C-204ENST00000415537 CHIC2Q9UKJ5 165 aa38.68■■■■□ 3.78
HLA-C-204ENST00000415537 ERBINQ96RT1 1412 aa38.68■■■■□ 3.78
HLA-C-204ENST00000415537 FAM50AQ14320 339 aaKnown RBP38.66■■■■□ 3.78
HLA-C-204ENST00000415537 MROH1Q8NDA8 1641 aa38.66■■■■□ 3.78
HLA-C-204ENST00000415537 ANKRD30AQ9BXX3 1397 aa38.66■■■■□ 3.78
HLA-C-204ENST00000415537 CEP152O94986 1710 aa38.64■■■■□ 3.78
HLA-C-204ENST00000415537 NLRP1Q9C000 1473 aa38.6■■■■□ 3.77
HLA-C-204ENST00000415537 CFAP65Q6ZU64 1925 aaKnown RBP38.58■■■■□ 3.77
HLA-C-204ENST00000415537 PRDM15P57071 1507 aaPredicted RBP38.57■■■■□ 3.76
HLA-C-204ENST00000415537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.56■■■■□ 3.76
HLA-C-204ENST00000415537 THEMISQ8N1K5 641 aaPredicted RBP38.54■■■■□ 3.76
HLA-C-204ENST00000415537 SPATA31D1Q6ZQQ2 1576 aa38.53■■■■□ 3.76
HLA-C-204ENST00000415537 UGGT1Q9NYU2 1555 aa38.53■■■■□ 3.76
HLA-C-204ENST00000415537 KANK1Q14678 1352 aa38.52■■■■□ 3.76
HLA-C-204ENST00000415537 ERVK-7P63135 1459 aa38.51■■■■□ 3.76
HLA-C-204ENST00000415537 DEPDC5O75140 1603 aa38.51■■■■□ 3.76
HLA-C-204ENST00000415537 POLR1AO95602 1720 aaPredicted RBP38.51■■■■□ 3.76
HLA-C-204ENST00000415537 LTBP4Q8N2S1 1624 aa38.5■■■■□ 3.75
HLA-C-204ENST00000415537 ADGRL2O95490 1459 aa38.49■■■■□ 3.75
HLA-C-204ENST00000415537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.47■■■■□ 3.75
HLA-C-204ENST00000415537 ANKLE2Q86XL3 938 aa38.46■■■■□ 3.75
HLA-C-204ENST00000415537 ARHGAP31Q2M1Z3 1444 aa38.44■■■■□ 3.74
HLA-C-204ENST00000415537 ZNF335Q9H4Z2 1342 aaPredicted RBP38.43■■■■□ 3.74
HLA-C-204ENST00000415537 PPARGC1BQ86YN6 1023 aaKnown RBP38.39■■■■□ 3.74
HLA-C-204ENST00000415537 NEURL4Q96JN8 1562 aa38.37■■■■□ 3.73
HLA-C-204ENST00000415537 IQSEC2Q5JU85 1478 aa38.36■■■■□ 3.73
HLA-C-204ENST00000415537 ANKRD50Q9ULJ7 1429 aa38.36■■■■□ 3.73
HLA-C-204ENST00000415537 LMTK2Q8IWU2 1503 aa38.33■■■■□ 3.73
HLA-C-204ENST00000415537 VWDEQ8N2E2 1590 aa38.33■■■■□ 3.73
HLA-C-204ENST00000415537 UBR1Q8IWV7 1749 aa38.31■■■■□ 3.72
HLA-C-204ENST00000415537 NPHP4O75161 1426 aaPredicted RBP38.28■■■■□ 3.72
HLA-C-204ENST00000415537 MED14O60244 1454 aa38.27■■■■□ 3.72
HLA-C-204ENST00000415537 IQGAP1P46940 1657 aa38.23■■■■□ 3.71
HLA-C-204ENST00000415537 ITGAEP38570 1179 aa38.23■■■■□ 3.71
HLA-C-204ENST00000415537 ROCK1Q13464 1354 aa38.22■■■■□ 3.71
HLA-C-204ENST00000415537 STAG3Q9UJ98 1225 aa38.22■■■■□ 3.71
HLA-C-204ENST00000415537 EFCAB6Q5THR3 1501 aa38.22■■■■□ 3.71
HLA-C-204ENST00000415537 PIK3C2BO00750 1634 aa38.2■■■■□ 3.7
HLA-C-204ENST00000415537 CPS1P31327 1500 aa38.15■■■■□ 3.7
HLA-C-204ENST00000415537 SCAF11Q99590 1463 aaKnown RBP38.14■■■■□ 3.7
HLA-C-204ENST00000415537 SLIT1O75093 1534 aa38.13■■■■□ 3.69
HLA-C-204ENST00000415537 IDI1Q13907 227 aa38.13■■■■□ 3.69
HLA-C-204ENST00000415537 TXNDC2Q86VQ3 553 aa38.13■■■■□ 3.69
HLA-C-204ENST00000415537 EID1Q9Y6B2 187 aa38.13■■■■□ 3.69
HLA-C-204ENST00000415537 UNC13BO14795 1591 aa38.12■■■■□ 3.69
HLA-C-204ENST00000415537 NOS1P29475 1434 aa38.12■■■■□ 3.69
HLA-C-204ENST00000415537 TET3O43151 1660 aa38.11■■■■□ 3.69
HLA-C-204ENST00000415537 SYNMO15061 1565 aa38.11■■■■□ 3.69
HLA-C-204ENST00000415537 RPRD2Q5VT52 1461 aaKnown RBP38.11■■■■□ 3.69
HLA-C-204ENST00000415537 ARHGAP23Q9P227 1491 aa38.11■■■■□ 3.69
HLA-C-204ENST00000415537 UBAP1LF5GYI3 381 aa38.11■■■■□ 3.69
HLA-C-204ENST00000415537 KDM5AP29375 1690 aaKnown RBP38.11■■■■□ 3.69
HLA-C-204ENST00000415537 LTKP29376 864 aa38.08■■■■□ 3.69
HLA-C-204ENST00000415537 GCC2Q8IWJ2 1684 aa38.07■■■■□ 3.69
HLA-C-204ENST00000415537 SLC52A1Q9NWF4 448 aa38.07■■■■□ 3.68
HLA-C-204ENST00000415537 TMEM2Q9UHN6 1383 aa38.06■■■■□ 3.68
HLA-C-204ENST00000415537 RRBP1Q9P2E9 1410 aaKnown RBP38■■■■□ 3.67
HLA-C-204ENST00000415537 ADGRB3O60242 1522 aa37.99■■■■□ 3.67
HLA-C-204ENST00000415537 IQGAP3Q86VI3 1631 aa37.98■■■■□ 3.67
HLA-C-204ENST00000415537 NUP155O75694 1391 aa37.97■■■■□ 3.67
HLA-C-204ENST00000415537 E9PCH4 1651 aa37.95■■■■□ 3.67
HLA-C-204ENST00000415537 STRCP1A6NGW2 1772 aa37.95■■■■□ 3.67
HLA-C-204ENST00000415537 TOM1O60784 492 aa37.94■■■■□ 3.66
HLA-C-204ENST00000415537 SCAF1Q9H7N4 1312 aaKnown RBP37.88■■■■□ 3.66
HLA-C-204ENST00000415537 MYO5BQ9ULV0 1848 aa37.88■■■■□ 3.65
HLA-C-204ENST00000415537 PIP4K2BP78356 416 aa37.85■■■■□ 3.65
HLA-C-204ENST00000415537 LRRC7Q96NW7 1537 aa37.85■■■■□ 3.65
HLA-C-204ENST00000415537 CHGAP10645 457 aaKnown RBP37.84■■■■□ 3.65
HLA-C-204ENST00000415537 HDGFP51858 240 aaKnown RBP37.83■■■■□ 3.65
HLA-C-204ENST00000415537 BCANQ96GW7 911 aa37.83■■■■□ 3.65
HLA-C-204ENST00000415537 TMEM131LA2VDJ0 1609 aa37.82■■■■□ 3.64
HLA-C-204ENST00000415537 SLC26A8Q96RN1 970 aa37.79■■■■□ 3.64
HLA-C-204ENST00000415537 PPP1R15AO75807 674 aaPredicted RBP37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms