RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
RFFL-205ENST00000415395 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
RFFL-205ENST00000415395 DEPDC5O75140 1603 aa16.6■□□□□ 0.25
RFFL-205ENST00000415395 FAM69CQ0P6D2 419 aa16.59■□□□□ 0.25
RFFL-205ENST00000415395 TONSLQ96HA7 1378 aa16.57■□□□□ 0.24
RFFL-205ENST00000415395 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
RFFL-205ENST00000415395 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
RFFL-205ENST00000415395 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
RFFL-205ENST00000415395 TSPOAP1O95153 1857 aa16.55■□□□□ 0.24
RFFL-205ENST00000415395 ZMYM4Q5VZL5 1548 aa16.54■□□□□ 0.24
RFFL-205ENST00000415395 PKD2Q13563 968 aa16.53■□□□□ 0.24
RFFL-205ENST00000415395 A2MP01023 1474 aa16.53■□□□□ 0.24
RFFL-205ENST00000415395 PRDM15P57071 1507 aaPredicted RBP16.52■□□□□ 0.24
RFFL-205ENST00000415395 ABCA6Q8N139 1617 aa16.52■□□□□ 0.24
RFFL-205ENST00000415395 RNF17Q9BXT8 1623 aaKnown RBP16.52■□□□□ 0.24
RFFL-205ENST00000415395 FRMPD1Q5SYB0 1578 aa16.52■□□□□ 0.24
RFFL-205ENST00000415395 VWDEQ8N2E2 1590 aa16.52■□□□□ 0.24
RFFL-205ENST00000415395 MIER1Q8N108 512 aa16.52■□□□□ 0.24
RFFL-205ENST00000415395 PPP1R15AO75807 674 aaPredicted RBP16.5■□□□□ 0.23
RFFL-205ENST00000415395 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
RFFL-205ENST00000415395 FOXD1Q16676 465 aa16.5■□□□□ 0.23
RFFL-205ENST00000415395 DIP2CQ9Y2E4 1556 aa16.5■□□□□ 0.23
RFFL-205ENST00000415395 TET3O43151 1660 aa16.5■□□□□ 0.23
RFFL-205ENST00000415395 MROH1Q8NDA8 1641 aa16.49■□□□□ 0.23
RFFL-205ENST00000415395 KANK1Q14678 1352 aa16.48■□□□□ 0.23
RFFL-205ENST00000415395 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
RFFL-205ENST00000415395 ATP10AO60312 1499 aa16.48■□□□□ 0.23
RFFL-205ENST00000415395 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
RFFL-205ENST00000415395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
RFFL-205ENST00000415395 LMTK2Q8IWU2 1503 aa16.45■□□□□ 0.22
RFFL-205ENST00000415395 E9PCH4 1651 aa16.45■□□□□ 0.22
RFFL-205ENST00000415395 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
RFFL-205ENST00000415395 KIF3BO15066 747 aa16.43■□□□□ 0.22
RFFL-205ENST00000415395 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
RFFL-205ENST00000415395 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
RFFL-205ENST00000415395 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
RFFL-205ENST00000415395 ZC3H13Q5T200 1668 aaKnown RBP16.39■□□□□ 0.22
RFFL-205ENST00000415395 TRPM2O94759 1503 aa16.39■□□□□ 0.22
RFFL-205ENST00000415395 PLA2R1Q13018 1463 aa16.39■□□□□ 0.22
RFFL-205ENST00000415395 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
RFFL-205ENST00000415395 CEP152O94986 1710 aa16.39■□□□□ 0.21
RFFL-205ENST00000415395 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
RFFL-205ENST00000415395 PTPRTO14522 1441 aa16.38■□□□□ 0.21
RFFL-205ENST00000415395 AGLP35573 1532 aa16.37■□□□□ 0.21
RFFL-205ENST00000415395 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
RFFL-205ENST00000415395 ARHGEF40Q8TER5 1519 aa16.36■□□□□ 0.21
RFFL-205ENST00000415395 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
RFFL-205ENST00000415395 ABCC3O15438 1527 aa16.34■□□□□ 0.21
RFFL-205ENST00000415395 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
RFFL-205ENST00000415395 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
RFFL-205ENST00000415395 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
RFFL-205ENST00000415395 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
RFFL-205ENST00000415395 ARHGAP31Q2M1Z3 1444 aa16.3■□□□□ 0.2
RFFL-205ENST00000415395 GGT6Q6P531 493 aa16.28■□□□□ 0.2
RFFL-205ENST00000415395 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
RFFL-205ENST00000415395 KIF1BO60333 1816 aa16.28■□□□□ 0.2
RFFL-205ENST00000415395 NPATQ14207 1427 aa16.27■□□□□ 0.19
RFFL-205ENST00000415395 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.19
RFFL-205ENST00000415395 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.19
RFFL-205ENST00000415395 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.19
RFFL-205ENST00000415395 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
RFFL-205ENST00000415395 STAC3Q96MF2 364 aa16.25■□□□□ 0.19
RFFL-205ENST00000415395 NBPF8Q3BBV2 869 aa16.25■□□□□ 0.19
RFFL-205ENST00000415395 SIGLEC1Q9BZZ2 1709 aa16.23■□□□□ 0.19
RFFL-205ENST00000415395 NOS1P29475 1434 aa16.22■□□□□ 0.19
RFFL-205ENST00000415395 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
RFFL-205ENST00000415395 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
RFFL-205ENST00000415395 TRPM1Q7Z4N2 1603 aa16.21■□□□□ 0.19
RFFL-205ENST00000415395 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
RFFL-205ENST00000415395 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
RFFL-205ENST00000415395 LAMC1P11047 1609 aa16.2■□□□□ 0.18
RFFL-205ENST00000415395 PREX1Q8TCU6 1659 aa16.2■□□□□ 0.18
RFFL-205ENST00000415395 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
RFFL-205ENST00000415395 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
RFFL-205ENST00000415395 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
RFFL-205ENST00000415395 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
RFFL-205ENST00000415395 POLR1AO95602 1720 aaPredicted RBP16.18■□□□□ 0.18
RFFL-205ENST00000415395 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
RFFL-205ENST00000415395 SYNMO15061 1565 aa16.17■□□□□ 0.18
RFFL-205ENST00000415395 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
RFFL-205ENST00000415395 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
RFFL-205ENST00000415395 MADDQ8WXG6 1647 aa16.17■□□□□ 0.18
RFFL-205ENST00000415395 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
RFFL-205ENST00000415395 MYOM2P54296 1465 aa16.16■□□□□ 0.18
RFFL-205ENST00000415395 KIAA1210Q9ULL0 1709 aa16.15■□□□□ 0.18
RFFL-205ENST00000415395 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
RFFL-205ENST00000415395 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
RFFL-205ENST00000415395 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
RFFL-205ENST00000415395 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
RFFL-205ENST00000415395 PPLO60437 1756 aa16.12■□□□□ 0.17
RFFL-205ENST00000415395 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
RFFL-205ENST00000415395 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
RFFL-205ENST00000415395 SPATA31D1Q6ZQQ2 1576 aa16.12■□□□□ 0.17
RFFL-205ENST00000415395 ROCK2O75116 1388 aaKnown RBP16.11■□□□□ 0.17
RFFL-205ENST00000415395 USP47Q96K76 1375 aa16.11■□□□□ 0.17
RFFL-205ENST00000415395 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
RFFL-205ENST00000415395 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
RFFL-205ENST00000415395 NRXN1Q9ULB1 1477 aa16.09■□□□□ 0.17
RFFL-205ENST00000415395 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
RFFL-205ENST00000415395 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms