RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
LINC01090-201ENST00000415357 AGLP35573 1532 aa15.09■□□□□ 0.01
LINC01090-201ENST00000415357 SPDYE4A6NLX3 237 aa15.09■□□□□ 0.01
LINC01090-201ENST00000415357 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
LINC01090-201ENST00000415357 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
LINC01090-201ENST00000415357 SPDYE6P0CI01 402 aa15.08■□□□□ 0
LINC01090-201ENST00000415357 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
LINC01090-201ENST00000415357 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
LINC01090-201ENST00000415357 MYOM3Q5VTT5 1437 aa15.06■□□□□ 0
LINC01090-201ENST00000415357 A2MP01023 1474 aa15.06■□□□□ 0
LINC01090-201ENST00000415357 PLXNC1O60486 1568 aa15.06■□□□□ 0
LINC01090-201ENST00000415357 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
LINC01090-201ENST00000415357 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
LINC01090-201ENST00000415357 ADGBQ8N7X0 1667 aa15.03■□□□□ -0
LINC01090-201ENST00000415357 CEBPAP49715 358 aaPredicted RBP15.03■□□□□ -0
LINC01090-201ENST00000415357 RTEL1-TNFRSF6BF6WH68 1400 aa15.02■□□□□ -0
LINC01090-201ENST00000415357 MIA2Q96PC5 1412 aa15.02■□□□□ -0
LINC01090-201ENST00000415357 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
LINC01090-201ENST00000415357 C3P01024 1663 aa15□□□□□ -0.01
LINC01090-201ENST00000415357 PTPN23Q9H3S7 1636 aa14.99□□□□□ -0.01
LINC01090-201ENST00000415357 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
LINC01090-201ENST00000415357 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
LINC01090-201ENST00000415357 FGD6Q6ZV73 1430 aa14.97□□□□□ -0.01
LINC01090-201ENST00000415357 MAST1Q9Y2H9 1570 aa14.97□□□□□ -0.01
LINC01090-201ENST00000415357 DHX29Q7Z478 1369 aaKnown RBP14.97□□□□□ -0.01
LINC01090-201ENST00000415357 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
LINC01090-201ENST00000415357 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
LINC01090-201ENST00000415357 HSPA2P54652 639 aa14.96□□□□□ -0.01
LINC01090-201ENST00000415357 GGT6Q6P531 493 aa14.96□□□□□ -0.01
LINC01090-201ENST00000415357 CLTCQ00610 1675 aaKnown RBP14.96□□□□□ -0.01
LINC01090-201ENST00000415357 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
LINC01090-201ENST00000415357 SSUH2Q9Y2M2 353 aa14.95□□□□□ -0.02
LINC01090-201ENST00000415357 PREX1Q8TCU6 1659 aa14.94□□□□□ -0.02
LINC01090-201ENST00000415357 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
LINC01090-201ENST00000415357 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
LINC01090-201ENST00000415357 CROCC2H7BZ55 1655 aa14.93□□□□□ -0.02
LINC01090-201ENST00000415357 ABCC5O15440 1437 aa14.93□□□□□ -0.02
LINC01090-201ENST00000415357 KIF3BO15066 747 aa14.92□□□□□ -0.02
LINC01090-201ENST00000415357 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
LINC01090-201ENST00000415357 ZMYM3Q14202 1370 aa14.91□□□□□ -0.02
LINC01090-201ENST00000415357 DAPK1P53355 1430 aa14.91□□□□□ -0.02
LINC01090-201ENST00000415357 PPARGC1BQ86YN6 1023 aaKnown RBP14.9□□□□□ -0.02
LINC01090-201ENST00000415357 UHRF1BP1Q6BDS2 1440 aa14.9□□□□□ -0.02
LINC01090-201ENST00000415357 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
LINC01090-201ENST00000415357 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
LINC01090-201ENST00000415357 KDM5DQ9BY66 1539 aa14.87□□□□□ -0.03
LINC01090-201ENST00000415357 KIF15Q9NS87 1388 aa14.86□□□□□ -0.03
LINC01090-201ENST00000415357 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
LINC01090-201ENST00000415357 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
LINC01090-201ENST00000415357 CHIC2Q9UKJ5 165 aa14.86□□□□□ -0.03
LINC01090-201ENST00000415357 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
LINC01090-201ENST00000415357 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
LINC01090-201ENST00000415357 NPATQ14207 1427 aa14.85□□□□□ -0.03
LINC01090-201ENST00000415357 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
LINC01090-201ENST00000415357 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
LINC01090-201ENST00000415357 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
LINC01090-201ENST00000415357 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
LINC01090-201ENST00000415357 MYO3AQ8NEV4 1616 aa14.83□□□□□ -0.04
LINC01090-201ENST00000415357 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
LINC01090-201ENST00000415357 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
LINC01090-201ENST00000415357 ABCC3O15438 1527 aa14.82□□□□□ -0.04
LINC01090-201ENST00000415357 ERBINQ96RT1 1412 aa14.81□□□□□ -0.04
LINC01090-201ENST00000415357 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
LINC01090-201ENST00000415357 ANKRD30AQ9BXX3 1397 aa14.8□□□□□ -0.04
LINC01090-201ENST00000415357 PZPP20742 1482 aa14.8□□□□□ -0.04
LINC01090-201ENST00000415357 CEP152O94986 1710 aa14.8□□□□□ -0.04
LINC01090-201ENST00000415357 STRCQ7RTU9 1775 aa14.8□□□□□ -0.04
LINC01090-201ENST00000415357 ADGRL2O95490 1459 aa14.79□□□□□ -0.04
LINC01090-201ENST00000415357 ZNF142P52746 1687 aaPredicted RBP14.79□□□□□ -0.04
LINC01090-201ENST00000415357 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
LINC01090-201ENST00000415357 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
LINC01090-201ENST00000415357 CEP170BQ9Y4F5 1589 aaPredicted RBP14.78□□□□□ -0.04
LINC01090-201ENST00000415357 PRDM15P57071 1507 aaPredicted RBP14.78□□□□□ -0.04
LINC01090-201ENST00000415357 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
LINC01090-201ENST00000415357 TNRQ92752 1358 aa14.76□□□□□ -0.05
LINC01090-201ENST00000415357 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
LINC01090-201ENST00000415357 PROM2Q8N271 834 aa14.76□□□□□ -0.05
LINC01090-201ENST00000415357 DEPDC5O75140 1603 aa14.76□□□□□ -0.05
LINC01090-201ENST00000415357 ITGAEP38570 1179 aa14.74□□□□□ -0.05
LINC01090-201ENST00000415357 A2ML1A8K2U0 1454 aa14.74□□□□□ -0.05
LINC01090-201ENST00000415357 ERVK-7P63135 1459 aa14.72□□□□□ -0.05
LINC01090-201ENST00000415357 SPATA31D1Q6ZQQ2 1576 aa14.72□□□□□ -0.05
LINC01090-201ENST00000415357 ANKRD50Q9ULJ7 1429 aa14.71□□□□□ -0.05
LINC01090-201ENST00000415357 NCKAP5LQ9HCH0 1330 aa14.7□□□□□ -0.06
LINC01090-201ENST00000415357 VWDEQ8N2E2 1590 aa14.7□□□□□ -0.06
LINC01090-201ENST00000415357 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
LINC01090-201ENST00000415357 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
LINC01090-201ENST00000415357 KANK1Q14678 1352 aa14.69□□□□□ -0.06
LINC01090-201ENST00000415357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC01090-201ENST00000415357 PTPRTO14522 1441 aa14.68□□□□□ -0.06
LINC01090-201ENST00000415357 RRBP1Q9P2E9 1410 aaKnown RBP14.68□□□□□ -0.06
LINC01090-201ENST00000415357 NLRP1Q9C000 1473 aa14.68□□□□□ -0.06
LINC01090-201ENST00000415357 CFAP65Q6ZU64 1925 aaKnown RBP14.68□□□□□ -0.06
LINC01090-201ENST00000415357 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
LINC01090-201ENST00000415357 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
LINC01090-201ENST00000415357 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
LINC01090-201ENST00000415357 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
LINC01090-201ENST00000415357 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
LINC01090-201ENST00000415357 EFCAB6Q5THR3 1501 aa14.66□□□□□ -0.06
LINC01090-201ENST00000415357 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms