RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ARID3CA6NKF2 412 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 HAX1O00165 279 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 BRPF1P55201 1214 aaPredicted RBP7.96□□□□□ -1.14
VPS41-205ENST00000414632 MS4A4AQ96JQ5 239 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 PLSCR2Q9NRY7 297 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 ZRANB1Q9UGI0 708 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 MAPKBP1O60336 1514 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 RAPGEF6Q8TEU7 1601 aa7.96□□□□□ -1.14
VPS41-205ENST00000414632 UHRF1BP1LA0JNW5 1464 aa7.95□□□□□ -1.14
VPS41-205ENST00000414632 EFCAB5A4FU69 1503 aa7.94□□□□□ -1.14
VPS41-205ENST00000414632 MFSD10Q14728 455 aa7.93□□□□□ -1.14
VPS41-205ENST00000414632 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
VPS41-205ENST00000414632 KDM5BQ9UGL1 1544 aa7.93□□□□□ -1.14
VPS41-205ENST00000414632 LRRIQ1Q96JM4 1722 aa7.92□□□□□ -1.14
VPS41-205ENST00000414632 SMYD5Q6GMV2 418 aa7.92□□□□□ -1.14
VPS41-205ENST00000414632 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
VPS41-205ENST00000414632 ASXL2Q76L83 1435 aa7.92□□□□□ -1.14
VPS41-205ENST00000414632 ABCC10Q5T3U5 1492 aa7.92□□□□□ -1.14
VPS41-205ENST00000414632 ARHGAP35Q9NRY4 1499 aa7.92□□□□□ -1.14
VPS41-205ENST00000414632 GOLGA2Q08379 1002 aa7.91□□□□□ -1.14
VPS41-205ENST00000414632 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
VPS41-205ENST00000414632 DDX27Q96GQ7 796 aaKnown RBP7.91□□□□□ -1.14
VPS41-205ENST00000414632 TMEM106CQ9BVX2 250 aa7.91□□□□□ -1.14
VPS41-205ENST00000414632 SLC24A3Q9HC58 644 aa7.91□□□□□ -1.14
VPS41-205ENST00000414632 PPRC1Q5VV67 1664 aaKnown RBP7.9□□□□□ -1.14
VPS41-205ENST00000414632 NEUROD2Q15784 382 aa7.9□□□□□ -1.14
VPS41-205ENST00000414632 ARIH1Q9Y4X5 557 aaPredicted RBP7.9□□□□□ -1.14
VPS41-205ENST00000414632 NUP153P49790 1475 aaKnown RBP7.89□□□□□ -1.15
VPS41-205ENST00000414632 MAP3K4Q9Y6R4 1608 aa7.89□□□□□ -1.15
VPS41-205ENST00000414632 ATP10BO94823 1461 aa7.88□□□□□ -1.15
VPS41-205ENST00000414632 ZMYND10O75800 440 aa7.88□□□□□ -1.15
VPS41-205ENST00000414632 C14orf37Q86TY3 774 aa7.88□□□□□ -1.15
VPS41-205ENST00000414632 PCF11O94913 1555 aaKnown RBP7.88□□□□□ -1.15
VPS41-205ENST00000414632 EPRSP07814 1512 aaKnown RBP7.88□□□□□ -1.15
VPS41-205ENST00000414632 CDK13Q14004 1512 aaKnown RBP7.88□□□□□ -1.15
VPS41-205ENST00000414632 WDR7Q9Y4E6 1490 aa7.87□□□□□ -1.15
VPS41-205ENST00000414632 LOC105371045A0A1W2PR82 267 aa7.87□□□□□ -1.15
VPS41-205ENST00000414632 EVX2Q03828 476 aa7.87□□□□□ -1.15
VPS41-205ENST00000414632 MKRN3Q13064 507 aaKnown RBP7.87□□□□□ -1.15
VPS41-205ENST00000414632 CAMK2BQ13554 666 aa7.87□□□□□ -1.15
VPS41-205ENST00000414632 ATP1B4Q9UN42 357 aaPredicted RBP7.87□□□□□ -1.15
VPS41-205ENST00000414632 HECW1Q76N89 1606 aa7.87□□□□□ -1.15
VPS41-205ENST00000414632 GLI2P10070 1586 aa7.87□□□□□ -1.15
VPS41-205ENST00000414632 CLIP1P30622 1438 aa7.86□□□□□ -1.15
VPS41-205ENST00000414632 CFAP43Q8NDM7 1665 aa7.86□□□□□ -1.15
VPS41-205ENST00000414632 KCNH8Q96L42 1107 aa7.86□□□□□ -1.15
VPS41-205ENST00000414632 TRPC6Q9Y210 931 aa7.86□□□□□ -1.15
VPS41-205ENST00000414632 KDM6BO15054 1643 aa7.85□□□□□ -1.15
VPS41-205ENST00000414632 BARGINQ6ZT62 677 aa7.84□□□□□ -1.15
VPS41-205ENST00000414632 MS4A3Q96HJ5 214 aa7.84□□□□□ -1.15
VPS41-205ENST00000414632 FMN1Q68DA7 1419 aa7.84□□□□□ -1.15
VPS41-205ENST00000414632 CEP162Q5TB80 1403 aa7.83□□□□□ -1.16
VPS41-205ENST00000414632 ABCA9Q8IUA7 1624 aa7.82□□□□□ -1.16
VPS41-205ENST00000414632 CLCN6P51797 869 aa7.82□□□□□ -1.16
VPS41-205ENST00000414632 TTC37Q6PGP7 1564 aa7.82□□□□□ -1.16
VPS41-205ENST00000414632 KIF14Q15058 1648 aa7.81□□□□□ -1.16
VPS41-205ENST00000414632 MLLT3P42568 568 aaPredicted RBP7.81□□□□□ -1.16
VPS41-205ENST00000414632 PPP1R15BQ5SWA1 713 aa7.81□□□□□ -1.16
VPS41-205ENST00000414632 RBM26Q5T8P6 1007 aaKnown RBP7.81□□□□□ -1.16
VPS41-205ENST00000414632 GPHNQ9NQX3 736 aaPredicted RBP7.81□□□□□ -1.16
VPS41-205ENST00000414632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.81□□□□□ -1.163e-7■■■□□ 18.2
VPS41-205ENST00000414632 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
VPS41-205ENST00000414632 LHX8Q68G74 356 aa7.8□□□□□ -1.16
VPS41-205ENST00000414632 MYO5CQ9NQX4 1742 aa7.8□□□□□ -1.16
VPS41-205ENST00000414632 CASKIN1Q8WXD9 1431 aa7.79□□□□□ -1.16
VPS41-205ENST00000414632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS41-205ENST00000414632 TTLL13PA6NNM8 815 aa7.79□□□□□ -1.16
VPS41-205ENST00000414632 ILDR1Q86SU0 546 aaPredicted RBP7.79□□□□□ -1.16
VPS41-205ENST00000414632 AK7Q96M32 723 aa7.79□□□□□ -1.16
VPS41-205ENST00000414632 FYCO1Q9BQS8 1478 aa7.79□□□□□ -1.16
VPS41-205ENST00000414632 MAGI3Q5TCQ9 1506 aa7.78□□□□□ -1.16
VPS41-205ENST00000414632 TIE1P35590 1138 aa7.78□□□□□ -1.16
VPS41-205ENST00000414632 GPIHBP1Q8IV16 184 aa7.78□□□□□ -1.16
VPS41-205ENST00000414632 KRI1Q8N9T8 703 aaKnown RBP7.78□□□□□ -1.16
VPS41-205ENST00000414632 ARXQ96QS3 562 aa7.78□□□□□ -1.16
VPS41-205ENST00000414632 TEX14Q8IWB6 1497 aa7.78□□□□□ -1.16
VPS41-205ENST00000414632 CCDC18Q5T9S5 1454 aa7.77□□□□□ -1.17
VPS41-205ENST00000414632 COL17A1Q9UMD9 1497 aaPredicted RBP7.77□□□□□ -1.17
VPS41-205ENST00000414632 PLEKHD1A6NEE1 506 aa7.77□□□□□ -1.17
VPS41-205ENST00000414632 CDC42BPAQ5VT25 1732 aa7.76□□□□□ -1.17
VPS41-205ENST00000414632 CDC42BPBQ9Y5S2 1711 aa7.76□□□□□ -1.17
VPS41-205ENST00000414632 DPYSL4O14531 572 aa7.76□□□□□ -1.17
VPS41-205ENST00000414632 EMILIN3Q9NT22 766 aa7.76□□□□□ -1.17
VPS41-205ENST00000414632 SPDYE16A6NNV3 312 aaPredicted RBP7.75□□□□□ -1.17
VPS41-205ENST00000414632 DSG2Q14126 1118 aa7.75□□□□□ -1.17
VPS41-205ENST00000414632 DPY19L2Q6NUT2 758 aa7.75□□□□□ -1.17
VPS41-205ENST00000414632 BMP2KQ9NSY1 1161 aaPredicted RBP7.75□□□□□ -1.17
VPS41-205ENST00000414632 TROQ12816 1431 aaPredicted RBP7.75□□□□□ -1.17
VPS41-205ENST00000414632 CFAP74Q9C0B2 1584 aa7.75□□□□□ -1.17
VPS41-205ENST00000414632 GABBR2O75899 941 aa7.74□□□□□ -1.17
VPS41-205ENST00000414632 PREX2Q70Z35 1606 aa7.74□□□□□ -1.17
VPS41-205ENST00000414632 RICTORQ6R327 1708 aa7.73□□□□□ -1.17
VPS41-205ENST00000414632 FRMPD1Q5SYB0 1578 aa7.73□□□□□ -1.17
VPS41-205ENST00000414632 GALR2O43603 387 aaPredicted RBP7.73□□□□□ -1.17
VPS41-205ENST00000414632 GPBP1L1Q9HC44 474 aaPredicted RBP7.73□□□□□ -1.17
VPS41-205ENST00000414632 TRIM35Q9UPQ4 493 aa7.73□□□□□ -1.17
VPS41-205ENST00000414632 VPS8Q8N3P4 1428 aa7.72□□□□□ -1.17
VPS41-205ENST00000414632 PDIA6Q15084 440 aa7.72□□□□□ -1.17
VPS41-205ENST00000414632 MICALL2Q8IY33 904 aa7.72□□□□□ -1.17
VPS41-205ENST00000414632 TMC2Q8TDI7 906 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms