RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 WASHC2CQ9Y4E1 1318 aa32.28■■■□□ 2.76
LMBR1-203ENST00000414218 KDM5DQ9BY66 1539 aa32.28■■■□□ 2.76
LMBR1-203ENST00000414218 ZNF142P52746 1687 aaPredicted RBP32.26■■■□□ 2.75
LMBR1-203ENST00000414218 CEP170BQ9Y4F5 1589 aaPredicted RBP32.24■■■□□ 2.75
LMBR1-203ENST00000414218 FBXO31Q5XUX0 539 aaPredicted RBP32.24■■■□□ 2.75
LMBR1-203ENST00000414218 FAM135AQ9P2D6 1515 aa32.24■■■□□ 2.75
LMBR1-203ENST00000414218 PTPN23Q9H3S7 1636 aa32.23■■■□□ 2.75
LMBR1-203ENST00000414218 NCKAP5LQ9HCH0 1330 aa32.23■■■□□ 2.75
LMBR1-203ENST00000414218 PZPP20742 1482 aa32.2■■■□□ 2.75
LMBR1-203ENST00000414218 RNF17Q9BXT8 1623 aaKnown RBP32.18■■■□□ 2.74
LMBR1-203ENST00000414218 TNRQ92752 1358 aa32.18■■■□□ 2.74
LMBR1-203ENST00000414218 ABCC5O15440 1437 aa32.17■■■□□ 2.74
LMBR1-203ENST00000414218 FGD6Q6ZV73 1430 aa32.17■■■□□ 2.74
LMBR1-203ENST00000414218 A2ML1A8K2U0 1454 aa32.16■■■□□ 2.74
LMBR1-203ENST00000414218 EIF2AK4Q9P2K8 1649 aaKnown RBP32.15■■■□□ 2.74
LMBR1-203ENST00000414218 PLA2R1Q13018 1463 aa32.15■■■□□ 2.74
LMBR1-203ENST00000414218 CROCC2H7BZ55 1655 aa32.15■■■□□ 2.74
LMBR1-203ENST00000414218 DUOX2Q9NRD8 1548 aa32.14■■■□□ 2.74
LMBR1-203ENST00000414218 PKD2Q13563 968 aa32.13■■■□□ 2.73
LMBR1-203ENST00000414218 DNMT1P26358 1616 aaKnown RBP32.12■■■□□ 2.73
LMBR1-203ENST00000414218 TCOF1Q13428 1488 aaKnown RBP32.12■■■□□ 2.73
LMBR1-203ENST00000414218 SHANK2Q9UPX8 1470 aa32.12■■■□□ 2.73
LMBR1-203ENST00000414218 RRP7BPQ9NSQ0 103 aa32.12■■■□□ 2.73
LMBR1-203ENST00000414218 DAPK1P53355 1430 aa32.11■■■□□ 2.73
LMBR1-203ENST00000414218 KIF15Q9NS87 1388 aa32.11■■■□□ 2.73
LMBR1-203ENST00000414218 ABCC3O15438 1527 aa32.1■■■□□ 2.73
LMBR1-203ENST00000414218 MROH1Q8NDA8 1641 aa32.08■■■□□ 2.73
LMBR1-203ENST00000414218 LTBP4Q8N2S1 1624 aa32.08■■■□□ 2.73
LMBR1-203ENST00000414218 ZC3H13Q5T200 1668 aaKnown RBP32.07■■■□□ 2.72
LMBR1-203ENST00000414218 CHIC2Q9UKJ5 165 aa32.04■■■□□ 2.72
LMBR1-203ENST00000414218 CEP152O94986 1710 aa32.03■■■□□ 2.72
LMBR1-203ENST00000414218 ERBINQ96RT1 1412 aa32.01■■■□□ 2.72
LMBR1-203ENST00000414218 NLRP1Q9C000 1473 aa32.01■■■□□ 2.71
LMBR1-203ENST00000414218 ZNF335Q9H4Z2 1342 aaPredicted RBP32■■■□□ 2.71
LMBR1-203ENST00000414218 THEMISQ8N1K5 641 aaPredicted RBP31.98■■■□□ 2.71
LMBR1-203ENST00000414218 CFAP65Q6ZU64 1925 aaKnown RBP31.98■■■□□ 2.71
LMBR1-203ENST00000414218 ANKRD30AQ9BXX3 1397 aa31.97■■■□□ 2.71
LMBR1-203ENST00000414218 FAM50AQ14320 339 aaKnown RBP31.97■■■□□ 2.71
LMBR1-203ENST00000414218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.97■■■□□ 2.711e-8■■■□□ 15.2
LMBR1-203ENST00000414218 SPATA31D1Q6ZQQ2 1576 aa31.97■■■□□ 2.71
LMBR1-203ENST00000414218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.96■■■□□ 2.714e-7■■■■□ 21.6
LMBR1-203ENST00000414218 ERVK-7P63135 1459 aa31.96■■■□□ 2.71
LMBR1-203ENST00000414218 POLR1AO95602 1720 aaPredicted RBP31.95■■■□□ 2.71
LMBR1-203ENST00000414218 UGGT1Q9NYU2 1555 aa31.95■■■□□ 2.71
LMBR1-203ENST00000414218 PRDM15P57071 1507 aaPredicted RBP31.95■■■□□ 2.7
LMBR1-203ENST00000414218 ANKLE2Q86XL3 938 aa31.92■■■□□ 2.7
LMBR1-203ENST00000414218 NEURL4Q96JN8 1562 aa31.91■■■□□ 2.7
LMBR1-203ENST00000414218 IQSEC2Q5JU85 1478 aa31.9■■■□□ 2.7
LMBR1-203ENST00000414218 DEPDC5O75140 1603 aa31.89■■■□□ 2.7
LMBR1-203ENST00000414218 KANK1Q14678 1352 aa31.87■■■□□ 2.69
LMBR1-203ENST00000414218 ARHGAP31Q2M1Z3 1444 aa31.86■■■□□ 2.69
LMBR1-203ENST00000414218 ADGRL2O95490 1459 aa31.85■■■□□ 2.69
LMBR1-203ENST00000414218 NPHP4O75161 1426 aaPredicted RBP31.79■■■□□ 2.68
LMBR1-203ENST00000414218 MED14O60244 1454 aa31.78■■■□□ 2.68
LMBR1-203ENST00000414218 UBR1Q8IWV7 1749 aa31.78■■■□□ 2.68
LMBR1-203ENST00000414218 VWDEQ8N2E2 1590 aa31.77■■■□□ 2.68
LMBR1-203ENST00000414218 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
LMBR1-203ENST00000414218 LMTK2Q8IWU2 1503 aa31.76■■■□□ 2.68
LMBR1-203ENST00000414218 ANKRD50Q9ULJ7 1429 aa31.74■■■□□ 2.67
LMBR1-203ENST00000414218 UBAP1LF5GYI3 381 aa31.73■■■□□ 2.67
LMBR1-203ENST00000414218 IQGAP1P46940 1657 aa31.73■■■□□ 2.67
LMBR1-203ENST00000414218 CPS1P31327 1500 aa31.69■■■□□ 2.66
LMBR1-203ENST00000414218 PIK3C2BO00750 1634 aa31.67■■■□□ 2.66
LMBR1-203ENST00000414218 EFCAB6Q5THR3 1501 aa31.66■■■□□ 2.66
LMBR1-203ENST00000414218 LTKP29376 864 aa31.66■■■□□ 2.66
LMBR1-203ENST00000414218 TXNDC2Q86VQ3 553 aa31.66■■■□□ 2.66
LMBR1-203ENST00000414218 SCAF11Q99590 1463 aaKnown RBP31.65■■■□□ 2.66
LMBR1-203ENST00000414218 IDI1Q13907 227 aa31.65■■■□□ 2.66
LMBR1-203ENST00000414218 STAG3Q9UJ98 1225 aa31.65■■■□□ 2.66
LMBR1-203ENST00000414218 ARHGAP23Q9P227 1491 aa31.65■■■□□ 2.66
LMBR1-203ENST00000414218 SLIT1O75093 1534 aa31.65■■■□□ 2.66
LMBR1-203ENST00000414218 SYNMO15061 1565 aa31.63■■■□□ 2.65
LMBR1-203ENST00000414218 ITGAEP38570 1179 aa31.62■■■□□ 2.65
LMBR1-203ENST00000414218 NOS1P29475 1434 aa31.61■■■□□ 2.65
LMBR1-203ENST00000414218 ROCK1Q13464 1354 aa31.61■■■□□ 2.65
LMBR1-203ENST00000414218 EID1Q9Y6B2 187 aa31.61■■■□□ 2.65
LMBR1-203ENST00000414218 TMEM2Q9UHN6 1383 aa31.58■■■□□ 2.65
LMBR1-203ENST00000414218 STRCP1A6NGW2 1772 aa31.57■■■□□ 2.64
LMBR1-203ENST00000414218 KDM5AP29375 1690 aaKnown RBP31.56■■■□□ 2.64
LMBR1-203ENST00000414218 UNC13BO14795 1591 aa31.56■■■□□ 2.64
LMBR1-203ENST00000414218 TET3O43151 1660 aa31.55■■■□□ 2.64
LMBR1-203ENST00000414218 RPRD2Q5VT52 1461 aaKnown RBP31.54■■■□□ 2.64
LMBR1-203ENST00000414218 TOM1O60784 492 aa31.53■■■□□ 2.64
LMBR1-203ENST00000414218 SLC52A1Q9NWF4 448 aa31.53■■■□□ 2.64
LMBR1-203ENST00000414218 PIP4K2BP78356 416 aa31.51■■■□□ 2.63
LMBR1-203ENST00000414218 SCAF1Q9H7N4 1312 aaKnown RBP31.5■■■□□ 2.63
LMBR1-203ENST00000414218 GCC2Q8IWJ2 1684 aa31.5■■■□□ 2.63
LMBR1-203ENST00000414218 ADGRB3O60242 1522 aa31.49■■■□□ 2.63
LMBR1-203ENST00000414218 LRRC7Q96NW7 1537 aa31.48■■■□□ 2.63
LMBR1-203ENST00000414218 DISP3Q9P2K9 1392 aa31.47■■■□□ 2.63
LMBR1-203ENST00000414218 IQGAP3Q86VI3 1631 aa31.43■■■□□ 2.62
LMBR1-203ENST00000414218 E9PCH4 1651 aa31.43■■■□□ 2.62
LMBR1-203ENST00000414218 NUP155O75694 1391 aa31.43■■■□□ 2.62
LMBR1-203ENST00000414218 MYO5BQ9ULV0 1848 aa31.4■■■□□ 2.62
LMBR1-203ENST00000414218 ALKQ9UM73 1620 aa31.39■■■□□ 2.62
LMBR1-203ENST00000414218 SLC26A8Q96RN1 970 aa31.39■■■□□ 2.62
LMBR1-203ENST00000414218 HSPA1LP34931 641 aa31.38■■■□□ 2.61
LMBR1-203ENST00000414218 RRBP1Q9P2E9 1410 aaKnown RBP31.38■■■□□ 2.61
LMBR1-203ENST00000414218 TMEM131LA2VDJ0 1609 aa31.36■■■□□ 2.61
LMBR1-203ENST00000414218 CHGAP10645 457 aaKnown RBP31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms