RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
HERPUD2-203ENST00000413517 DNMT1P26358 1616 aaKnown RBP13.4□□□□□ -0.26
HERPUD2-203ENST00000413517 APLP2Q06481 763 aa13.39□□□□□ -0.27
HERPUD2-203ENST00000413517 TCOF1Q13428 1488 aaKnown RBP13.39□□□□□ -0.27
HERPUD2-203ENST00000413517 DHX29Q7Z478 1369 aaKnown RBP13.38□□□□□ -0.27
HERPUD2-203ENST00000413517 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
HERPUD2-203ENST00000413517 ABCC5O15440 1437 aa13.37□□□□□ -0.27
HERPUD2-203ENST00000413517 RSPH4AQ5TD94 716 aa13.36□□□□□ -0.27
HERPUD2-203ENST00000413517 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
HERPUD2-203ENST00000413517 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
HERPUD2-203ENST00000413517 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
HERPUD2-203ENST00000413517 HSPA2P54652 639 aa13.35□□□□□ -0.27
HERPUD2-203ENST00000413517 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
HERPUD2-203ENST00000413517 SHANK2Q9UPX8 1470 aa13.35□□□□□ -0.27
HERPUD2-203ENST00000413517 DAPK1P53355 1430 aa13.34□□□□□ -0.27
HERPUD2-203ENST00000413517 EIF2AK4Q9P2K8 1649 aaKnown RBP13.34□□□□□ -0.27
HERPUD2-203ENST00000413517 STRCQ7RTU9 1775 aa13.33□□□□□ -0.28
HERPUD2-203ENST00000413517 GGT6Q6P531 493 aa13.33□□□□□ -0.28
HERPUD2-203ENST00000413517 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
HERPUD2-203ENST00000413517 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
HERPUD2-203ENST00000413517 CEP152O94986 1710 aa13.32□□□□□ -0.28
HERPUD2-203ENST00000413517 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
HERPUD2-203ENST00000413517 KIF3BO15066 747 aa13.31□□□□□ -0.28
HERPUD2-203ENST00000413517 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
HERPUD2-203ENST00000413517 KDM5DQ9BY66 1539 aa13.3□□□□□ -0.28
HERPUD2-203ENST00000413517 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
HERPUD2-203ENST00000413517 CFAP65Q6ZU64 1925 aaKnown RBP13.3□□□□□ -0.28
HERPUD2-203ENST00000413517 ZNF142P52746 1687 aaPredicted RBP13.3□□□□□ -0.28
HERPUD2-203ENST00000413517 PTPRKQ15262 1439 aa13.3□□□□□ -0.28
HERPUD2-203ENST00000413517 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
HERPUD2-203ENST00000413517 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
HERPUD2-203ENST00000413517 ESF1Q9H501 851 aaKnown RBP13.29□□□□□ -0.28
HERPUD2-203ENST00000413517 NPATQ14207 1427 aa13.29□□□□□ -0.28
HERPUD2-203ENST00000413517 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
HERPUD2-203ENST00000413517 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
HERPUD2-203ENST00000413517 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
HERPUD2-203ENST00000413517 ABCC3O15438 1527 aa13.28□□□□□ -0.28
HERPUD2-203ENST00000413517 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
HERPUD2-203ENST00000413517 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
HERPUD2-203ENST00000413517 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
HERPUD2-203ENST00000413517 PRDM15P57071 1507 aaPredicted RBP13.26□□□□□ -0.29
HERPUD2-203ENST00000413517 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
HERPUD2-203ENST00000413517 PZPP20742 1482 aa13.25□□□□□ -0.29
HERPUD2-203ENST00000413517 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
HERPUD2-203ENST00000413517 CHIC2Q9UKJ5 165 aa13.25□□□□□ -0.29
HERPUD2-203ENST00000413517 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
HERPUD2-203ENST00000413517 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
HERPUD2-203ENST00000413517 ERBINQ96RT1 1412 aa13.24□□□□□ -0.29
HERPUD2-203ENST00000413517 FAM50AQ14320 339 aaKnown RBP13.24□□□□□ -0.29
HERPUD2-203ENST00000413517 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
HERPUD2-203ENST00000413517 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
HERPUD2-203ENST00000413517 ANKRD30AQ9BXX3 1397 aa13.21□□□□□ -0.29
HERPUD2-203ENST00000413517 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
HERPUD2-203ENST00000413517 VWDEQ8N2E2 1590 aa13.21□□□□□ -0.29
HERPUD2-203ENST00000413517 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
HERPUD2-203ENST00000413517 TNRQ92752 1358 aa13.19□□□□□ -0.3
HERPUD2-203ENST00000413517 A2ML1A8K2U0 1454 aa13.18□□□□□ -0.3
HERPUD2-203ENST00000413517 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
HERPUD2-203ENST00000413517 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
HERPUD2-203ENST00000413517 RRBP1Q9P2E9 1410 aaKnown RBP13.16□□□□□ -0.3
HERPUD2-203ENST00000413517 UNC13BO14795 1591 aa13.15□□□□□ -0.3
HERPUD2-203ENST00000413517 ANKRD50Q9ULJ7 1429 aa13.15□□□□□ -0.3
HERPUD2-203ENST00000413517 LMTK2Q8IWU2 1503 aa13.15□□□□□ -0.3
HERPUD2-203ENST00000413517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.3
HERPUD2-203ENST00000413517 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
HERPUD2-203ENST00000413517 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
HERPUD2-203ENST00000413517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
HERPUD2-203ENST00000413517 NEURL4Q96JN8 1562 aa13.14□□□□□ -0.31
HERPUD2-203ENST00000413517 PTPRTO14522 1441 aa13.13□□□□□ -0.31
HERPUD2-203ENST00000413517 ARHGAP31Q2M1Z3 1444 aa13.13□□□□□ -0.31
HERPUD2-203ENST00000413517 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
HERPUD2-203ENST00000413517 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
HERPUD2-203ENST00000413517 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
HERPUD2-203ENST00000413517 TET3O43151 1660 aa13.12□□□□□ -0.31
HERPUD2-203ENST00000413517 SYNMO15061 1565 aa13.12□□□□□ -0.31
HERPUD2-203ENST00000413517 NLRP1Q9C000 1473 aa13.12□□□□□ -0.31
HERPUD2-203ENST00000413517 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
HERPUD2-203ENST00000413517 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
HERPUD2-203ENST00000413517 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
HERPUD2-203ENST00000413517 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
HERPUD2-203ENST00000413517 ITGAEP38570 1179 aa13.11□□□□□ -0.31
HERPUD2-203ENST00000413517 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
HERPUD2-203ENST00000413517 E9PCH4 1651 aa13.1□□□□□ -0.31
HERPUD2-203ENST00000413517 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
HERPUD2-203ENST00000413517 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
HERPUD2-203ENST00000413517 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
HERPUD2-203ENST00000413517 KANK1Q14678 1352 aa13.09□□□□□ -0.31
HERPUD2-203ENST00000413517 NOS1P29475 1434 aa13.07□□□□□ -0.32
HERPUD2-203ENST00000413517 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
HERPUD2-203ENST00000413517 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
HERPUD2-203ENST00000413517 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
HERPUD2-203ENST00000413517 PKD2Q13563 968 aa13.04□□□□□ -0.32
HERPUD2-203ENST00000413517 NAIPQ13075 1403 aa13.04□□□□□ -0.32
HERPUD2-203ENST00000413517 RPRD2Q5VT52 1461 aaKnown RBP13.04□□□□□ -0.32
HERPUD2-203ENST00000413517 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
HERPUD2-203ENST00000413517 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
HERPUD2-203ENST00000413517 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
HERPUD2-203ENST00000413517 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
HERPUD2-203ENST00000413517 MED14O60244 1454 aa13.03□□□□□ -0.32
HERPUD2-203ENST00000413517 SLIT1O75093 1534 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms