RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 UHRF1BP1LA0JNW5 1464 aa7.89□□□□□ -1.15
PRDM2-206ENST00000413440 CLSPNQ9HAW4 1339 aa7.89□□□□□ -1.15
PRDM2-206ENST00000413440 NGDNQ8NEJ9 315 aaKnown RBP7.89□□□□□ -1.15
PRDM2-206ENST00000413440 EVA1CP58658 441 aa7.88□□□□□ -1.15
PRDM2-206ENST00000413440 ATP10AO60312 1499 aa7.88□□□□□ -1.15
PRDM2-206ENST00000413440 CAMSAP2Q08AD1 1489 aa7.87□□□□□ -1.15
PRDM2-206ENST00000413440 SYCP2Q9BX26 1530 aa7.87□□□□□ -1.15
PRDM2-206ENST00000413440 PPM1GO15355 546 aaPredicted RBP7.87□□□□□ -1.15
PRDM2-206ENST00000413440 TNRQ92752 1358 aa7.87□□□□□ -1.15
PRDM2-206ENST00000413440 LRRC9Q6ZRR7 1453 aa7.87□□□□□ -1.15
PRDM2-206ENST00000413440 ESCO1Q5FWF5 840 aa7.86□□□□□ -1.15
PRDM2-206ENST00000413440 PSME1Q06323 249 aa7.86□□□□□ -1.15
PRDM2-206ENST00000413440 SF3B2Q13435 895 aaKnown RBP7.86□□□□□ -1.15
PRDM2-206ENST00000413440 CCDC141Q6ZP82 1450 aa7.85□□□□□ -1.15
PRDM2-206ENST00000413440 FAM135AQ9P2D6 1515 aa7.85□□□□□ -1.15
PRDM2-206ENST00000413440 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
PRDM2-206ENST00000413440 TRAPPC8Q9Y2L5 1435 aa7.85□□□□□ -1.15
PRDM2-206ENST00000413440 NCBP3Q53F19 620 aaKnown RBP7.85□□□□□ -1.15
PRDM2-206ENST00000413440 YEATS2Q9ULM3 1422 aa7.85□□□□□ -1.15
PRDM2-206ENST00000413440 MYO5CQ9NQX4 1742 aa7.85□□□□□ -1.15
PRDM2-206ENST00000413440 ZMYM3Q14202 1370 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 KDM4FA0A1W2PPD8 638 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 ABCA8O94911 1581 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 NEO1Q92859 1461 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 ARXQ96QS3 562 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 KDM5BQ9UGL1 1544 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 VGFO15240 615 aaPredicted RBP7.84□□□□□ -1.15
PRDM2-206ENST00000413440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.84□□□□□ -1.15
PRDM2-206ENST00000413440 TMX4Q9H1E5 349 aaPredicted RBP7.84□□□□□ -1.15
PRDM2-206ENST00000413440 TRAK1Q9UPV9 953 aa7.84□□□□□ -1.15
PRDM2-206ENST00000413440 DIP2BQ9P265 1576 aa7.84□□□□□ -1.16
PRDM2-206ENST00000413440 ADAMTS2O95450 1211 aa7.84□□□□□ -1.16
PRDM2-206ENST00000413440 MAPKBP1O60336 1514 aa7.83□□□□□ -1.16
PRDM2-206ENST00000413440 MPHOSPH9Q99550 1183 aa7.83□□□□□ -1.16
PRDM2-206ENST00000413440 HIRIP3Q9BW71 556 aaPredicted RBP7.83□□□□□ -1.16
PRDM2-206ENST00000413440 DISP3Q9P2K9 1392 aa7.83□□□□□ -1.16
PRDM2-206ENST00000413440 A2MP01023 1474 aa7.83□□□□□ -1.16
PRDM2-206ENST00000413440 ANP32CO43423 234 aa7.83□□□□□ -1.16
PRDM2-206ENST00000413440 GOLGA2Q08379 1002 aa7.83□□□□□ -1.16
PRDM2-206ENST00000413440 XPCQ01831 940 aaPredicted RBP7.83□□□□□ -1.16
PRDM2-206ENST00000413440 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
PRDM2-206ENST00000413440 FGD6Q6ZV73 1430 aa7.82□□□□□ -1.16
PRDM2-206ENST00000413440 KLHL34Q8N239 644 aa7.82□□□□□ -1.16
PRDM2-206ENST00000413440 ITSN2Q9NZM3 1697 aa7.82□□□□□ -1.16
PRDM2-206ENST00000413440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.82□□□□□ -1.16
PRDM2-206ENST00000413440 MAP3K9P80192 1104 aa7.81□□□□□ -1.16
PRDM2-206ENST00000413440 CARD11Q9BXL7 1154 aa7.81□□□□□ -1.16
PRDM2-206ENST00000413440 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
PRDM2-206ENST00000413440 ANKRD50Q9ULJ7 1429 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 CFAP43Q8NDM7 1665 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 NUTM2GQ5VZR2 741 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 TIAM1Q13009 1591 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 TTC37Q6PGP7 1564 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 RIMS1Q86UR5 1692 aaKnown RBP7.8□□□□□ -1.16
PRDM2-206ENST00000413440 CCDC144AA2RUR9 1427 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 CNTLNQ9NXG0 1405 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
PRDM2-206ENST00000413440 MSH5O43196 834 aa7.79□□□□□ -1.16
PRDM2-206ENST00000413440 DAPK1P53355 1430 aa7.79□□□□□ -1.16
PRDM2-206ENST00000413440 MSH6P52701 1360 aa7.79□□□□□ -1.16
PRDM2-206ENST00000413440 ACIN1Q9UKV3 1341 aaKnown RBP7.79□□□□□ -1.16
PRDM2-206ENST00000413440 TNNT2P45379 298 aaPredicted RBP7.79□□□□□ -1.16
PRDM2-206ENST00000413440 GPATCH8Q9UKJ3 1502 aaKnown RBP7.79□□□□□ -1.16
PRDM2-206ENST00000413440 DHX29Q7Z478 1369 aaKnown RBP7.79□□□□□ -1.16
PRDM2-206ENST00000413440 SAMD9Q5K651 1589 aa7.78□□□□□ -1.16
PRDM2-206ENST00000413440 USP35Q9P2H5 1018 aa7.78□□□□□ -1.16
PRDM2-206ENST00000413440 TMEM132EQ6IEE7 984 aa7.78□□□□□ -1.16
PRDM2-206ENST00000413440 NGLY1Q96IV0 654 aa7.78□□□□□ -1.16
PRDM2-206ENST00000413440 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
PRDM2-206ENST00000413440 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
PRDM2-206ENST00000413440 PTPN23Q9H3S7 1636 aa7.77□□□□□ -1.16
PRDM2-206ENST00000413440 MAGI3Q5TCQ9 1506 aa7.77□□□□□ -1.17
PRDM2-206ENST00000413440 LTV1Q96GA3 475 aaPredicted RBP7.77□□□□□ -1.17
PRDM2-206ENST00000413440 C8orf37Q96NL8 207 aa7.77□□□□□ -1.17
PRDM2-206ENST00000413440 SIN3AQ96ST3 1273 aa7.77□□□□□ -1.17
PRDM2-206ENST00000413440 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.17
PRDM2-206ENST00000413440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.77□□□□□ -1.17
PRDM2-206ENST00000413440 PMFBP1Q8TBY8 1022 aa7.77□□□□□ -1.17
PRDM2-206ENST00000413440 SLC52A1Q9NWF4 448 aa7.76□□□□□ -1.17
PRDM2-206ENST00000413440 ATP7AQ04656 1500 aa7.76□□□□□ -1.17
PRDM2-206ENST00000413440 HDGFL2Q7Z4V5 671 aaPredicted RBP7.76□□□□□ -1.17
PRDM2-206ENST00000413440 GTF3C3Q9Y5Q9 886 aa7.75□□□□□ -1.17
PRDM2-206ENST00000413440 AMOTL2Q9Y2J4 779 aa7.75□□□□□ -1.17
PRDM2-206ENST00000413440 HECW2Q9P2P5 1572 aa7.75□□□□□ -1.17
PRDM2-206ENST00000413440 ZNF335Q9H4Z2 1342 aaPredicted RBP7.75□□□□□ -1.17
PRDM2-206ENST00000413440 ERBINQ96RT1 1412 aa7.75□□□□□ -1.17
PRDM2-206ENST00000413440 ROCK2O75116 1388 aaKnown RBP7.74□□□□□ -1.17
PRDM2-206ENST00000413440 TULP1O00294 542 aaPredicted RBP7.74□□□□□ -1.17
PRDM2-206ENST00000413440 ILDR1Q86SU0 546 aaPredicted RBP7.74□□□□□ -1.17
PRDM2-206ENST00000413440 DDX10Q13206 875 aaKnown RBP7.74□□□□□ -1.17
PRDM2-206ENST00000413440 BCL11AQ9H165 835 aa7.74□□□□□ -1.17
PRDM2-206ENST00000413440 MIA2Q96PC5 1412 aa7.74□□□□□ -1.17
PRDM2-206ENST00000413440 IDI1Q13907 227 aa7.74□□□□□ -1.17
PRDM2-206ENST00000413440 SYTL4Q96C24 671 aaPredicted RBP7.73□□□□□ -1.17
PRDM2-206ENST00000413440 PTPRMP28827 1452 aa7.73□□□□□ -1.17
PRDM2-206ENST00000413440 DHX57Q6P158 1386 aaKnown RBP7.72□□□□□ -1.17
PRDM2-206ENST00000413440 CFAP65Q6ZU64 1925 aaKnown RBP7.72□□□□□ -1.17
PRDM2-206ENST00000413440 GPRASP1Q5JY77 1395 aa7.72□□□□□ -1.17
PRDM2-206ENST00000413440 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
PRDM2-206ENST00000413440 GLI2P10070 1586 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms