RNA–Protein interactions for RNA: ENST00000413402.5

LINC00378-201, long intergenic non-protein coding RNA 378, humanhuman

TSL 5 BASIC

Gene LINC00378, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-201ENST00000413402 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
LINC00378-201ENST00000413402 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
LINC00378-201ENST00000413402 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
LINC00378-201ENST00000413402 TNRQ92752 1358 aa16.57■□□□□ 0.24
LINC00378-201ENST00000413402 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
LINC00378-201ENST00000413402 ARHGEF5Q12774 1597 aa16.56■□□□□ 0.24
LINC00378-201ENST00000413402 ZNF335Q9H4Z2 1342 aaPredicted RBP16.56■□□□□ 0.24
LINC00378-201ENST00000413402 KDM5DQ9BY66 1539 aa16.55■□□□□ 0.24
LINC00378-201ENST00000413402 A2ML1A8K2U0 1454 aa16.55■□□□□ 0.24
LINC00378-201ENST00000413402 PLA2R1Q13018 1463 aa16.55■□□□□ 0.24
LINC00378-201ENST00000413402 LTBP4Q8N2S1 1624 aa16.53■□□□□ 0.24
LINC00378-201ENST00000413402 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
LINC00378-201ENST00000413402 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
LINC00378-201ENST00000413402 ANKLE2Q86XL3 938 aa16.52■□□□□ 0.24
LINC00378-201ENST00000413402 PZPP20742 1482 aa16.52■□□□□ 0.23
LINC00378-201ENST00000413402 MYOM3Q5VTT5 1437 aa16.52■□□□□ 0.23
LINC00378-201ENST00000413402 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
LINC00378-201ENST00000413402 FAM135AQ9P2D6 1515 aa16.51■□□□□ 0.23
LINC00378-201ENST00000413402 IQSEC2Q5JU85 1478 aa16.51■□□□□ 0.23
LINC00378-201ENST00000413402 DNMT1P26358 1616 aaKnown RBP16.51■□□□□ 0.23
LINC00378-201ENST00000413402 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
LINC00378-201ENST00000413402 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
LINC00378-201ENST00000413402 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
LINC00378-201ENST00000413402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00378-201ENST00000413402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00378-201ENST00000413402 RRP7BPQ9NSQ0 103 aa16.47■□□□□ 0.23
LINC00378-201ENST00000413402 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
LINC00378-201ENST00000413402 NLRP1Q9C000 1473 aa16.46■□□□□ 0.23
LINC00378-201ENST00000413402 SPATA31D1Q6ZQQ2 1576 aa16.46■□□□□ 0.23
LINC00378-201ENST00000413402 UGGT1Q9NYU2 1555 aa16.45■□□□□ 0.22
LINC00378-201ENST00000413402 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
LINC00378-201ENST00000413402 DUOX2Q9NRD8 1548 aa16.44■□□□□ 0.22
LINC00378-201ENST00000413402 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
LINC00378-201ENST00000413402 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
LINC00378-201ENST00000413402 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
LINC00378-201ENST00000413402 KIF15Q9NS87 1388 aa16.42■□□□□ 0.22
LINC00378-201ENST00000413402 ABCC3O15438 1527 aa16.42■□□□□ 0.22
LINC00378-201ENST00000413402 PIP4K2BP78356 416 aa16.42■□□□□ 0.22
LINC00378-201ENST00000413402 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
LINC00378-201ENST00000413402 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
LINC00378-201ENST00000413402 KANK1Q14678 1352 aa16.41■□□□□ 0.22
LINC00378-201ENST00000413402 TOM1O60784 492 aa16.41■□□□□ 0.22
LINC00378-201ENST00000413402 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
LINC00378-201ENST00000413402 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
LINC00378-201ENST00000413402 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
LINC00378-201ENST00000413402 CEP152O94986 1710 aa16.39■□□□□ 0.21
LINC00378-201ENST00000413402 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
LINC00378-201ENST00000413402 ABCC5O15440 1437 aa16.38■□□□□ 0.21
LINC00378-201ENST00000413402 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
LINC00378-201ENST00000413402 CPS1P31327 1500 aa16.38■□□□□ 0.21
LINC00378-201ENST00000413402 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
LINC00378-201ENST00000413402 DAPK1P53355 1430 aa16.37■□□□□ 0.21
LINC00378-201ENST00000413402 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
LINC00378-201ENST00000413402 NEURL4Q96JN8 1562 aa16.37■□□□□ 0.21
LINC00378-201ENST00000413402 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
LINC00378-201ENST00000413402 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
LINC00378-201ENST00000413402 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
LINC00378-201ENST00000413402 CROCC2H7BZ55 1655 aa16.35■□□□□ 0.21
LINC00378-201ENST00000413402 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
LINC00378-201ENST00000413402 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
LINC00378-201ENST00000413402 MED14O60244 1454 aa16.33■□□□□ 0.2
LINC00378-201ENST00000413402 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.2
LINC00378-201ENST00000413402 IQGAP1P46940 1657 aa16.33■□□□□ 0.2
LINC00378-201ENST00000413402 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
LINC00378-201ENST00000413402 HSPA1LP34931 641 aa16.3■□□□□ 0.2
LINC00378-201ENST00000413402 BCANQ96GW7 911 aa16.3■□□□□ 0.2
LINC00378-201ENST00000413402 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
LINC00378-201ENST00000413402 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
LINC00378-201ENST00000413402 VWDEQ8N2E2 1590 aa16.29■□□□□ 0.2
LINC00378-201ENST00000413402 UBR1Q8IWV7 1749 aa16.28■□□□□ 0.2
LINC00378-201ENST00000413402 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
LINC00378-201ENST00000413402 LTKP29376 864 aa16.27■□□□□ 0.2
LINC00378-201ENST00000413402 IDI1Q13907 227 aa16.24■□□□□ 0.19
LINC00378-201ENST00000413402 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
LINC00378-201ENST00000413402 TMEM2Q9UHN6 1383 aa16.23■□□□□ 0.19
LINC00378-201ENST00000413402 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
LINC00378-201ENST00000413402 SLIT1O75093 1534 aa16.22■□□□□ 0.19
LINC00378-201ENST00000413402 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
LINC00378-201ENST00000413402 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
LINC00378-201ENST00000413402 ITGAEP38570 1179 aa16.21■□□□□ 0.19
LINC00378-201ENST00000413402 SLC52A1Q9NWF4 448 aa16.21■□□□□ 0.19
LINC00378-201ENST00000413402 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.19
LINC00378-201ENST00000413402 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
LINC00378-201ENST00000413402 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
LINC00378-201ENST00000413402 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
LINC00378-201ENST00000413402 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
LINC00378-201ENST00000413402 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
LINC00378-201ENST00000413402 STRCP1A6NGW2 1772 aa16.19■□□□□ 0.18
LINC00378-201ENST00000413402 SYNMO15061 1565 aa16.19■□□□□ 0.18
LINC00378-201ENST00000413402 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
LINC00378-201ENST00000413402 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
LINC00378-201ENST00000413402 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
LINC00378-201ENST00000413402 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
LINC00378-201ENST00000413402 KCNA6P17658 529 aa16.15■□□□□ 0.18
LINC00378-201ENST00000413402 NOS1P29475 1434 aa16.14■□□□□ 0.17
LINC00378-201ENST00000413402 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.17
LINC00378-201ENST00000413402 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
LINC00378-201ENST00000413402 ADGRB3O60242 1522 aa16.13■□□□□ 0.17
LINC00378-201ENST00000413402 RPRD2Q5VT52 1461 aaKnown RBP16.12■□□□□ 0.17
LINC00378-201ENST00000413402 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms