RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
HMGN1P34-201ENST00000413023 POGZQ7Z3K3 1410 aa12.35□□□□□ -0.43
HMGN1P34-201ENST00000413023 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
HMGN1P34-201ENST00000413023 NEO1Q92859 1461 aa12.34□□□□□ -0.43
HMGN1P34-201ENST00000413023 MAP3K4Q9Y6R4 1608 aa12.33□□□□□ -0.43
HMGN1P34-201ENST00000413023 KIDINS220Q9ULH0 1771 aa12.33□□□□□ -0.44
HMGN1P34-201ENST00000413023 MLH3Q9UHC1 1453 aa12.33□□□□□ -0.44
HMGN1P34-201ENST00000413023 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
HMGN1P34-201ENST00000413023 ZNF518AQ6AHZ1 1483 aa12.32□□□□□ -0.44
HMGN1P34-201ENST00000413023 KDM5CP41229 1560 aa12.3□□□□□ -0.44
HMGN1P34-201ENST00000413023 IQGAP3Q86VI3 1631 aa12.3□□□□□ -0.44
HMGN1P34-201ENST00000413023 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
HMGN1P34-201ENST00000413023 A2MP01023 1474 aa12.29□□□□□ -0.44
HMGN1P34-201ENST00000413023 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
HMGN1P34-201ENST00000413023 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
HMGN1P34-201ENST00000413023 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
HMGN1P34-201ENST00000413023 VWDEQ8N2E2 1590 aa12.28□□□□□ -0.44
HMGN1P34-201ENST00000413023 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
HMGN1P34-201ENST00000413023 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
HMGN1P34-201ENST00000413023 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
HMGN1P34-201ENST00000413023 MROH1Q8NDA8 1641 aa12.27□□□□□ -0.44
HMGN1P34-201ENST00000413023 RGL3Q3MIN7 710 aa12.27□□□□□ -0.45
HMGN1P34-201ENST00000413023 ATP10AO60312 1499 aa12.27□□□□□ -0.45
HMGN1P34-201ENST00000413023 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P34-201ENST00000413023 PTPRTO14522 1441 aa12.26□□□□□ -0.45
HMGN1P34-201ENST00000413023 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
HMGN1P34-201ENST00000413023 PPRC1Q5VV67 1664 aaKnown RBP12.26□□□□□ -0.45
HMGN1P34-201ENST00000413023 GGT6Q6P531 493 aa12.25□□□□□ -0.45
HMGN1P34-201ENST00000413023 UHRF1BP1Q6BDS2 1440 aa12.25□□□□□ -0.45
HMGN1P34-201ENST00000413023 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
HMGN1P34-201ENST00000413023 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGN1P34-201ENST00000413023 ZNF326Q5BKZ1 582 aaKnown RBP12.24□□□□□ -0.45
HMGN1P34-201ENST00000413023 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
HMGN1P34-201ENST00000413023 ABCA6Q8N139 1617 aa12.23□□□□□ -0.45
HMGN1P34-201ENST00000413023 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
HMGN1P34-201ENST00000413023 KANK1Q14678 1352 aa12.23□□□□□ -0.45
HMGN1P34-201ENST00000413023 E9PCH4 1651 aa12.22□□□□□ -0.45
HMGN1P34-201ENST00000413023 RICTORQ6R327 1708 aa12.22□□□□□ -0.45
HMGN1P34-201ENST00000413023 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
HMGN1P34-201ENST00000413023 WASHC2AQ641Q2 1341 aa12.21□□□□□ -0.45
HMGN1P34-201ENST00000413023 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.45
HMGN1P34-201ENST00000413023 EIF2AK4Q9P2K8 1649 aaKnown RBP12.21□□□□□ -0.46
HMGN1P34-201ENST00000413023 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
HMGN1P34-201ENST00000413023 PRDM15P57071 1507 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P34-201ENST00000413023 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
HMGN1P34-201ENST00000413023 TET3O43151 1660 aa12.18□□□□□ -0.46
HMGN1P34-201ENST00000413023 TSPOAP1O95153 1857 aa12.18□□□□□ -0.46
HMGN1P34-201ENST00000413023 WASHC2CQ9Y4E1 1318 aa12.17□□□□□ -0.46
HMGN1P34-201ENST00000413023 KIF13AQ9H1H9 1805 aa12.17□□□□□ -0.46
HMGN1P34-201ENST00000413023 RNF17Q9BXT8 1623 aaKnown RBP12.17□□□□□ -0.46
HMGN1P34-201ENST00000413023 NPATQ14207 1427 aa12.16□□□□□ -0.46
HMGN1P34-201ENST00000413023 PRAG1Q86YV5 1406 aa12.16□□□□□ -0.46
HMGN1P34-201ENST00000413023 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
HMGN1P34-201ENST00000413023 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
HMGN1P34-201ENST00000413023 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
HMGN1P34-201ENST00000413023 ABCC3O15438 1527 aa12.15□□□□□ -0.46
HMGN1P34-201ENST00000413023 TRPM2O94759 1503 aa12.15□□□□□ -0.46
HMGN1P34-201ENST00000413023 CLTCL1P53675 1640 aa12.15□□□□□ -0.47
HMGN1P34-201ENST00000413023 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
HMGN1P34-201ENST00000413023 BCORL1Q5H9F3 1711 aa12.14□□□□□ -0.47
HMGN1P34-201ENST00000413023 CCDC7Q96M83 1385 aa12.14□□□□□ -0.47
HMGN1P34-201ENST00000413023 KIF7Q2M1P5 1343 aa12.13□□□□□ -0.47
HMGN1P34-201ENST00000413023 EFCAB6Q5THR3 1501 aa12.13□□□□□ -0.47
HMGN1P34-201ENST00000413023 USP47Q96K76 1375 aa12.13□□□□□ -0.47
HMGN1P34-201ENST00000413023 ST20-MTHFSA0A0A6YYL1 179 aa12.12□□□□□ -0.47
HMGN1P34-201ENST00000413023 FBXO31Q5XUX0 539 aaPredicted RBP12.12□□□□□ -0.47
HMGN1P34-201ENST00000413023 NOS1P29475 1434 aa12.11□□□□□ -0.47
HMGN1P34-201ENST00000413023 CEP152O94986 1710 aa12.11□□□□□ -0.47
HMGN1P34-201ENST00000413023 GPRASP1Q5JY77 1395 aa12.11□□□□□ -0.47
HMGN1P34-201ENST00000413023 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
HMGN1P34-201ENST00000413023 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
HMGN1P34-201ENST00000413023 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
HMGN1P34-201ENST00000413023 SPHKAPQ2M3C7 1700 aa12.1□□□□□ -0.47
HMGN1P34-201ENST00000413023 SIGLEC1Q9BZZ2 1709 aa12.09□□□□□ -0.47
HMGN1P34-201ENST00000413023 ROCK2O75116 1388 aaKnown RBP12.09□□□□□ -0.47
HMGN1P34-201ENST00000413023 IDI1Q13907 227 aa12.09□□□□□ -0.47
HMGN1P34-201ENST00000413023 ARHGAP31Q2M1Z3 1444 aa12.09□□□□□ -0.47
HMGN1P34-201ENST00000413023 MLECQ14165 292 aa12.08□□□□□ -0.48
HMGN1P34-201ENST00000413023 TRPM1Q7Z4N2 1603 aa12.08□□□□□ -0.48
HMGN1P34-201ENST00000413023 AGLP35573 1532 aa12.07□□□□□ -0.48
HMGN1P34-201ENST00000413023 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
HMGN1P34-201ENST00000413023 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
HMGN1P34-201ENST00000413023 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
HMGN1P34-201ENST00000413023 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
HMGN1P34-201ENST00000413023 TESK2Q96S53 571 aa12.07□□□□□ -0.48
HMGN1P34-201ENST00000413023 CNTLNQ9NXG0 1405 aa12.06□□□□□ -0.48
HMGN1P34-201ENST00000413023 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
HMGN1P34-201ENST00000413023 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
HMGN1P34-201ENST00000413023 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
HMGN1P34-201ENST00000413023 SYNMO15061 1565 aa12.05□□□□□ -0.48
HMGN1P34-201ENST00000413023 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
HMGN1P34-201ENST00000413023 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
HMGN1P34-201ENST00000413023 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
HMGN1P34-201ENST00000413023 CCDC184Q52MB2 194 aa12.03□□□□□ -0.48
HMGN1P34-201ENST00000413023 MADDQ8WXG6 1647 aa12.03□□□□□ -0.48
HMGN1P34-201ENST00000413023 ANP32CO43423 234 aa12.02□□□□□ -0.49
HMGN1P34-201ENST00000413023 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
HMGN1P34-201ENST00000413023 MROH2AA6NES4 1674 aa12.02□□□□□ -0.49
HMGN1P34-201ENST00000413023 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.49
HMGN1P34-201ENST00000413023 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms