RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
COPS7B-209ENST00000412922 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
COPS7B-209ENST00000412922 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
COPS7B-209ENST00000412922 ZC3H13Q5T200 1668 aaKnown RBP19.36■□□□□ 0.69
COPS7B-209ENST00000412922 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
COPS7B-209ENST00000412922 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
COPS7B-209ENST00000412922 SPATA31D1Q6ZQQ2 1576 aa19.35■□□□□ 0.69
COPS7B-209ENST00000412922 KIF3BO15066 747 aa19.34■□□□□ 0.69
COPS7B-209ENST00000412922 TNRQ92752 1358 aa19.34■□□□□ 0.69
COPS7B-209ENST00000412922 RNF17Q9BXT8 1623 aaKnown RBP19.34■□□□□ 0.69
COPS7B-209ENST00000412922 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
COPS7B-209ENST00000412922 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.69
COPS7B-209ENST00000412922 NLRP1Q9C000 1473 aa19.32■□□□□ 0.68
COPS7B-209ENST00000412922 DISP3Q9P2K9 1392 aa19.32■□□□□ 0.68
COPS7B-209ENST00000412922 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
COPS7B-209ENST00000412922 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
COPS7B-209ENST00000412922 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
COPS7B-209ENST00000412922 WASHC2CQ9Y4E1 1318 aa19.29■□□□□ 0.68
COPS7B-209ENST00000412922 NEURL4Q96JN8 1562 aa19.29■□□□□ 0.68
COPS7B-209ENST00000412922 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
COPS7B-209ENST00000412922 CPS1P31327 1500 aa19.28■□□□□ 0.68
COPS7B-209ENST00000412922 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
COPS7B-209ENST00000412922 UGGT1Q9NYU2 1555 aa19.26■□□□□ 0.67
COPS7B-209ENST00000412922 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
COPS7B-209ENST00000412922 ABCC3O15438 1527 aa19.25■□□□□ 0.67
COPS7B-209ENST00000412922 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
COPS7B-209ENST00000412922 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
COPS7B-209ENST00000412922 CROCC2H7BZ55 1655 aa19.22■□□□□ 0.67
COPS7B-209ENST00000412922 DUOX2Q9NRD8 1548 aa19.22■□□□□ 0.67
COPS7B-209ENST00000412922 MED14O60244 1454 aa19.21■□□□□ 0.67
COPS7B-209ENST00000412922 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
COPS7B-209ENST00000412922 MROH1Q8NDA8 1641 aa19.21■□□□□ 0.67
COPS7B-209ENST00000412922 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
COPS7B-209ENST00000412922 IQGAP1P46940 1657 aa19.2■□□□□ 0.66
COPS7B-209ENST00000412922 ANKLE2Q86XL3 938 aa19.19■□□□□ 0.66
COPS7B-209ENST00000412922 CEP152O94986 1710 aa19.19■□□□□ 0.66
COPS7B-209ENST00000412922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
COPS7B-209ENST00000412922 ERVK-7P63135 1459 aa19.19■□□□□ 0.66
COPS7B-209ENST00000412922 PRDM15P57071 1507 aaPredicted RBP19.18■□□□□ 0.66
COPS7B-209ENST00000412922 VWDEQ8N2E2 1590 aa19.17■□□□□ 0.66
COPS7B-209ENST00000412922 NPHP4O75161 1426 aaPredicted RBP19.17■□□□□ 0.66
COPS7B-209ENST00000412922 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
COPS7B-209ENST00000412922 SYNMO15061 1565 aa19.15■□□□□ 0.66
COPS7B-209ENST00000412922 PTPN23Q9H3S7 1636 aa19.15■□□□□ 0.66
COPS7B-209ENST00000412922 KANK4Q5T7N3 995 aaPredicted RBP19.13■□□□□ 0.65
COPS7B-209ENST00000412922 UBR1Q8IWV7 1749 aa19.13■□□□□ 0.65
COPS7B-209ENST00000412922 SOCS7O14512 581 aa19.13■□□□□ 0.65
COPS7B-209ENST00000412922 ILDR2Q71H61 639 aa19.13■□□□□ 0.65
COPS7B-209ENST00000412922 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
COPS7B-209ENST00000412922 TOM1O60784 492 aa19.12■□□□□ 0.65
COPS7B-209ENST00000412922 ARHGAP31Q2M1Z3 1444 aa19.11■□□□□ 0.65
COPS7B-209ENST00000412922 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
COPS7B-209ENST00000412922 APLP2Q06481 763 aa19.1■□□□□ 0.65
COPS7B-209ENST00000412922 ABCC5O15440 1437 aa19.08■□□□□ 0.64
COPS7B-209ENST00000412922 SCAF11Q99590 1463 aaKnown RBP19.07■□□□□ 0.64
COPS7B-209ENST00000412922 DAPK1P53355 1430 aa19.07■□□□□ 0.64
COPS7B-209ENST00000412922 SLIT1O75093 1534 aa19.07■□□□□ 0.64
COPS7B-209ENST00000412922 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
COPS7B-209ENST00000412922 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
COPS7B-209ENST00000412922 KDM5AP29375 1690 aaKnown RBP19.06■□□□□ 0.64
COPS7B-209ENST00000412922 CFAP65Q6ZU64 1925 aaKnown RBP19.06■□□□□ 0.64
COPS7B-209ENST00000412922 ARHGAP23Q9P227 1491 aa19.05■□□□□ 0.64
COPS7B-209ENST00000412922 KANK1Q14678 1352 aa19.05■□□□□ 0.64
COPS7B-209ENST00000412922 STRCP1A6NGW2 1772 aa19.04■□□□□ 0.64
COPS7B-209ENST00000412922 MED1Q15648 1581 aaPredicted RBP19.03■□□□□ 0.64
COPS7B-209ENST00000412922 LMTK2Q8IWU2 1503 aa19.03■□□□□ 0.64
COPS7B-209ENST00000412922 PIP4K2BP78356 416 aa19.02■□□□□ 0.64
COPS7B-209ENST00000412922 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.64
COPS7B-209ENST00000412922 PIK3C2BO00750 1634 aa19.02■□□□□ 0.63
COPS7B-209ENST00000412922 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
COPS7B-209ENST00000412922 ALKQ9UM73 1620 aa19.01■□□□□ 0.63
COPS7B-209ENST00000412922 HSPA1LP34931 641 aa19■□□□□ 0.63
COPS7B-209ENST00000412922 RRP7BPQ9NSQ0 103 aa19■□□□□ 0.63
COPS7B-209ENST00000412922 EFCAB6Q5THR3 1501 aa18.98■□□□□ 0.63
COPS7B-209ENST00000412922 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
COPS7B-209ENST00000412922 EID1Q9Y6B2 187 aa18.97■□□□□ 0.63
COPS7B-209ENST00000412922 TMEM2Q9UHN6 1383 aa18.94■□□□□ 0.62
COPS7B-209ENST00000412922 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
COPS7B-209ENST00000412922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.626e-8■■□□□ 11.8
COPS7B-209ENST00000412922 ADGRB3O60242 1522 aa18.93■□□□□ 0.62
COPS7B-209ENST00000412922 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
COPS7B-209ENST00000412922 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
COPS7B-209ENST00000412922 XIRP1Q702N8 1843 aaKnown RBP18.91■□□□□ 0.62
COPS7B-209ENST00000412922 LTKP29376 864 aa18.91■□□□□ 0.62
COPS7B-209ENST00000412922 NOS1P29475 1434 aa18.9■□□□□ 0.62
COPS7B-209ENST00000412922 CHIC2Q9UKJ5 165 aa18.88■□□□□ 0.61
COPS7B-209ENST00000412922 TET3O43151 1660 aa18.88■□□□□ 0.61
COPS7B-209ENST00000412922 ANKRD50Q9ULJ7 1429 aa18.86■□□□□ 0.61
COPS7B-209ENST00000412922 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
COPS7B-209ENST00000412922 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
COPS7B-209ENST00000412922 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
COPS7B-209ENST00000412922 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
COPS7B-209ENST00000412922 SLC52A1Q9NWF4 448 aa18.85■□□□□ 0.61
COPS7B-209ENST00000412922 IDI1Q13907 227 aa18.84■□□□□ 0.61
COPS7B-209ENST00000412922 UNC13BO14795 1591 aa18.84■□□□□ 0.61
COPS7B-209ENST00000412922 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
COPS7B-209ENST00000412922 FAM135BQ49AJ0 1406 aa18.8■□□□□ 0.6
COPS7B-209ENST00000412922 TMEM94Q12767 1356 aa18.8■□□□□ 0.6
COPS7B-209ENST00000412922 KCNA6P17658 529 aa18.8■□□□□ 0.6
COPS7B-209ENST00000412922 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 304.2 ms