RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 VWDEQ8N2E2 1590 aa15.85■□□□□ 0.13
SMARCAL1-204ENST00000412913 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-204ENST00000412913 ATP10AO60312 1499 aa15.84■□□□□ 0.13
SMARCAL1-204ENST00000412913 AGLP35573 1532 aa15.84■□□□□ 0.13
SMARCAL1-204ENST00000412913 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
SMARCAL1-204ENST00000412913 CEP152O94986 1710 aa15.82■□□□□ 0.12
SMARCAL1-204ENST00000412913 PZPP20742 1482 aa15.81■□□□□ 0.12
SMARCAL1-204ENST00000412913 HRCP23327 699 aa15.8■□□□□ 0.12
SMARCAL1-204ENST00000412913 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
SMARCAL1-204ENST00000412913 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
SMARCAL1-204ENST00000412913 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
SMARCAL1-204ENST00000412913 TET3O43151 1660 aa15.77■□□□□ 0.12
SMARCAL1-204ENST00000412913 MYT1LQ9UL68 1186 aa15.77■□□□□ 0.12
SMARCAL1-204ENST00000412913 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
SMARCAL1-204ENST00000412913 LMTK2Q8IWU2 1503 aa15.75■□□□□ 0.11
SMARCAL1-204ENST00000412913 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
SMARCAL1-204ENST00000412913 E9PCH4 1651 aa15.74■□□□□ 0.11
SMARCAL1-204ENST00000412913 ABCC3O15438 1527 aa15.73■□□□□ 0.11
SMARCAL1-204ENST00000412913 EFCAB6Q5THR3 1501 aa15.73■□□□□ 0.11
SMARCAL1-204ENST00000412913 CLTCQ00610 1675 aaKnown RBP15.71■□□□□ 0.11
SMARCAL1-204ENST00000412913 KIF3BO15066 747 aa15.7■□□□□ 0.1
SMARCAL1-204ENST00000412913 NUP155O75694 1391 aa15.7■□□□□ 0.1
SMARCAL1-204ENST00000412913 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
SMARCAL1-204ENST00000412913 FER1L4A9Z1Z3 1794 aa15.69■□□□□ 0.1
SMARCAL1-204ENST00000412913 SPHKAPQ2M3C7 1700 aa15.68■□□□□ 0.1
SMARCAL1-204ENST00000412913 MROH2AA6NES4 1674 aa15.68■□□□□ 0.1
SMARCAL1-204ENST00000412913 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
SMARCAL1-204ENST00000412913 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
SMARCAL1-204ENST00000412913 MADDQ8WXG6 1647 aa15.65■□□□□ 0.1
SMARCAL1-204ENST00000412913 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
SMARCAL1-204ENST00000412913 KANK1Q14678 1352 aa15.63■□□□□ 0.09
SMARCAL1-204ENST00000412913 MPHOSPH9Q99550 1183 aa15.63■□□□□ 0.09
SMARCAL1-204ENST00000412913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMARCAL1-204ENST00000412913 RPRD2Q5VT52 1461 aaKnown RBP15.62■□□□□ 0.09
SMARCAL1-204ENST00000412913 TRPM2O94759 1503 aa15.62■□□□□ 0.09
SMARCAL1-204ENST00000412913 NPATQ14207 1427 aa15.61■□□□□ 0.09
SMARCAL1-204ENST00000412913 C3P01024 1663 aa15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 GGT6Q6P531 493 aa15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 SYNMO15061 1565 aa15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
SMARCAL1-204ENST00000412913 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
SMARCAL1-204ENST00000412913 PIK3C2BO00750 1634 aa15.59■□□□□ 0.09
SMARCAL1-204ENST00000412913 ANKRD30BQ9BXX2 1392 aa15.59■□□□□ 0.09
SMARCAL1-204ENST00000412913 SPATA31D1Q6ZQQ2 1576 aa15.58■□□□□ 0.09
SMARCAL1-204ENST00000412913 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
SMARCAL1-204ENST00000412913 PTPRTO14522 1441 aa15.58■□□□□ 0.08
SMARCAL1-204ENST00000412913 PKD2Q13563 968 aa15.57■□□□□ 0.08
SMARCAL1-204ENST00000412913 FOXD1Q16676 465 aa15.57■□□□□ 0.08
SMARCAL1-204ENST00000412913 CCER1Q8TC90 406 aaPredicted RBP15.57■□□□□ 0.08
SMARCAL1-204ENST00000412913 CNTLNQ9NXG0 1405 aa15.56■□□□□ 0.08
SMARCAL1-204ENST00000412913 CFAP65Q6ZU64 1925 aaKnown RBP15.55■□□□□ 0.08
SMARCAL1-204ENST00000412913 UGGT1Q9NYU2 1555 aa15.55■□□□□ 0.08
SMARCAL1-204ENST00000412913 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
SMARCAL1-204ENST00000412913 NOS1P29475 1434 aa15.55■□□□□ 0.08
SMARCAL1-204ENST00000412913 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
SMARCAL1-204ENST00000412913 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
SMARCAL1-204ENST00000412913 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
SMARCAL1-204ENST00000412913 MLECQ14165 292 aa15.54■□□□□ 0.08
SMARCAL1-204ENST00000412913 KIF1BO60333 1816 aa15.51■□□□□ 0.07
SMARCAL1-204ENST00000412913 NEURL4Q96JN8 1562 aa15.5■□□□□ 0.07
SMARCAL1-204ENST00000412913 MYO5BQ9ULV0 1848 aa15.5■□□□□ 0.07
SMARCAL1-204ENST00000412913 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
SMARCAL1-204ENST00000412913 IFT172Q9UG01 1749 aa15.49■□□□□ 0.07
SMARCAL1-204ENST00000412913 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
SMARCAL1-204ENST00000412913 ZMYM3Q14202 1370 aa15.48■□□□□ 0.07
SMARCAL1-204ENST00000412913 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
SMARCAL1-204ENST00000412913 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
SMARCAL1-204ENST00000412913 KDM5AP29375 1690 aaKnown RBP15.45■□□□□ 0.06
SMARCAL1-204ENST00000412913 ZNF142P52746 1687 aaPredicted RBP15.45■□□□□ 0.06
SMARCAL1-204ENST00000412913 TMEM131LA2VDJ0 1609 aa15.45■□□□□ 0.06
SMARCAL1-204ENST00000412913 SPATA31E1Q6ZUB1 1445 aa15.44■□□□□ 0.06
SMARCAL1-204ENST00000412913 UBR1Q8IWV7 1749 aa15.43■□□□□ 0.06
SMARCAL1-204ENST00000412913 PTPRMP28827 1452 aa15.43■□□□□ 0.06
SMARCAL1-204ENST00000412913 PPLO60437 1756 aa15.43■□□□□ 0.06
SMARCAL1-204ENST00000412913 FBXO31Q5XUX0 539 aaPredicted RBP15.42■□□□□ 0.06
SMARCAL1-204ENST00000412913 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-204ENST00000412913 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
SMARCAL1-204ENST00000412913 TNRQ92752 1358 aa15.38■□□□□ 0.05
SMARCAL1-204ENST00000412913 CEP170BQ9Y4F5 1589 aaPredicted RBP15.37■□□□□ 0.05
SMARCAL1-204ENST00000412913 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
SMARCAL1-204ENST00000412913 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
SMARCAL1-204ENST00000412913 NLRP1Q9C000 1473 aa15.37■□□□□ 0.05
SMARCAL1-204ENST00000412913 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
SMARCAL1-204ENST00000412913 A2ML1A8K2U0 1454 aa15.35■□□□□ 0.05
SMARCAL1-204ENST00000412913 KDM4FA0A1W2PPD8 638 aa15.34■□□□□ 0.05
SMARCAL1-204ENST00000412913 MYOM2P54296 1465 aa15.33■□□□□ 0.05
SMARCAL1-204ENST00000412913 IDI1Q13907 227 aa15.33■□□□□ 0.04
SMARCAL1-204ENST00000412913 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
SMARCAL1-204ENST00000412913 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
SMARCAL1-204ENST00000412913 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
SMARCAL1-204ENST00000412913 TIMELESSQ9UNS1 1208 aa15.31■□□□□ 0.04
SMARCAL1-204ENST00000412913 NRXN1Q9ULB1 1477 aa15.31■□□□□ 0.04
SMARCAL1-204ENST00000412913 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-204ENST00000412913 UHRF1BP1Q6BDS2 1440 aa15.3■□□□□ 0.04
SMARCAL1-204ENST00000412913 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
SMARCAL1-204ENST00000412913 KIAA1210Q9ULL0 1709 aa15.29■□□□□ 0.04
SMARCAL1-204ENST00000412913 SLIT1O75093 1534 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms