RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 VPS8Q8N3P4 1428 aa29.58■■■□□ 2.33
ITGA6-204ENST00000412899 A2ML1A8K2U0 1454 aa29.57■■■□□ 2.32
ITGA6-204ENST00000412899 WASHC2CQ9Y4E1 1318 aa29.57■■■□□ 2.32
ITGA6-204ENST00000412899 FBXO31Q5XUX0 539 aaPredicted RBP29.56■■■□□ 2.32
ITGA6-204ENST00000412899 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
ITGA6-204ENST00000412899 LRRC9Q6ZRR7 1453 aa29.55■■■□□ 2.32
ITGA6-204ENST00000412899 ARHGEF5Q12774 1597 aa29.55■■■□□ 2.32
ITGA6-204ENST00000412899 TNRQ92752 1358 aa29.54■■■□□ 2.32
ITGA6-204ENST00000412899 DISP3Q9P2K9 1392 aa29.53■■■□□ 2.32
ITGA6-204ENST00000412899 FAM135AQ9P2D6 1515 aa29.53■■■□□ 2.32
ITGA6-204ENST00000412899 DNMT1P26358 1616 aaKnown RBP29.53■■■□□ 2.32
ITGA6-204ENST00000412899 PZPP20742 1482 aa29.51■■■□□ 2.31
ITGA6-204ENST00000412899 KANK4Q5T7N3 995 aaPredicted RBP29.47■■■□□ 2.31
ITGA6-204ENST00000412899 UBAP1LF5GYI3 381 aa29.46■■■□□ 2.31
ITGA6-204ENST00000412899 MAP3K1Q13233 1512 aa29.42■■■□□ 2.3
ITGA6-204ENST00000412899 MIA2Q96PC5 1412 aa29.42■■■□□ 2.3
ITGA6-204ENST00000412899 THEMISQ8N1K5 641 aaPredicted RBP29.41■■■□□ 2.3
ITGA6-204ENST00000412899 MAST1Q9Y2H9 1570 aa29.4■■■□□ 2.3
ITGA6-204ENST00000412899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.39■■■□□ 2.3
ITGA6-204ENST00000412899 MYOM3Q5VTT5 1437 aa29.39■■■□□ 2.3
ITGA6-204ENST00000412899 ANKLE2Q86XL3 938 aa29.39■■■□□ 2.3
ITGA6-204ENST00000412899 NLRP1Q9C000 1473 aa29.39■■■□□ 2.3
ITGA6-204ENST00000412899 POLR1AO95602 1720 aaPredicted RBP29.39■■■□□ 2.3
ITGA6-204ENST00000412899 ILDR2Q71H61 639 aa29.36■■■□□ 2.29
ITGA6-204ENST00000412899 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
ITGA6-204ENST00000412899 UGGT1Q9NYU2 1555 aa29.35■■■□□ 2.29
ITGA6-204ENST00000412899 RNF17Q9BXT8 1623 aaKnown RBP29.35■■■□□ 2.29
ITGA6-204ENST00000412899 SPATA31D1Q6ZQQ2 1576 aa29.35■■■□□ 2.29
ITGA6-204ENST00000412899 ABCC3O15438 1527 aa29.33■■■□□ 2.29
ITGA6-204ENST00000412899 EIF2AK4Q9P2K8 1649 aaKnown RBP29.32■■■□□ 2.28
ITGA6-204ENST00000412899 ZC3H13Q5T200 1668 aaKnown RBP29.31■■■□□ 2.28
ITGA6-204ENST00000412899 APLP2Q06481 763 aa29.31■■■□□ 2.28
ITGA6-204ENST00000412899 SHANK2Q9UPX8 1470 aa29.29■■■□□ 2.28
ITGA6-204ENST00000412899 CPS1P31327 1500 aa29.29■■■□□ 2.28
ITGA6-204ENST00000412899 NPHP4O75161 1426 aaPredicted RBP29.28■■■□□ 2.28
ITGA6-204ENST00000412899 DUOX2Q9NRD8 1548 aa29.27■■■□□ 2.28
ITGA6-204ENST00000412899 SCAF1Q9H7N4 1312 aaKnown RBP29.25■■■□□ 2.27
ITGA6-204ENST00000412899 MED14O60244 1454 aa29.24■■■□□ 2.27
ITGA6-204ENST00000412899 ERVK-7P63135 1459 aa29.24■■■□□ 2.27
ITGA6-204ENST00000412899 DEPDC5O75140 1603 aa29.24■■■□□ 2.27
ITGA6-204ENST00000412899 MROH1Q8NDA8 1641 aa29.24■■■□□ 2.27
ITGA6-204ENST00000412899 TOM1O60784 492 aa29.23■■■□□ 2.27
ITGA6-204ENST00000412899 PIP4K2BP78356 416 aa29.22■■■□□ 2.27
ITGA6-204ENST00000412899 KIF15Q9NS87 1388 aa29.22■■■□□ 2.27
ITGA6-204ENST00000412899 CEP152O94986 1710 aa29.21■■■□□ 2.27
ITGA6-204ENST00000412899 SOCS7O14512 581 aa29.21■■■□□ 2.27
ITGA6-204ENST00000412899 RRP7BPQ9NSQ0 103 aa29.21■■■□□ 2.27
ITGA6-204ENST00000412899 ABCC5O15440 1437 aa29.2■■■□□ 2.26
ITGA6-204ENST00000412899 VWDEQ8N2E2 1590 aa29.19■■■□□ 2.26
ITGA6-204ENST00000412899 PTPN23Q9H3S7 1636 aa29.18■■■□□ 2.26
ITGA6-204ENST00000412899 IQGAP1P46940 1657 aa29.17■■■□□ 2.26
ITGA6-204ENST00000412899 ERBINQ96RT1 1412 aa29.16■■■□□ 2.26
ITGA6-204ENST00000412899 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
ITGA6-204ENST00000412899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.263e-8■■□□□ 11.5
ITGA6-204ENST00000412899 CFAP65Q6ZU64 1925 aaKnown RBP29.15■■■□□ 2.26
ITGA6-204ENST00000412899 DAPK1P53355 1430 aa29.14■■■□□ 2.26
ITGA6-204ENST00000412899 HSPA1LP34931 641 aa29.13■■■□□ 2.25
ITGA6-204ENST00000412899 PRDM15P57071 1507 aaPredicted RBP29.13■■■□□ 2.25
ITGA6-204ENST00000412899 ARHGAP31Q2M1Z3 1444 aa29.11■■■□□ 2.25
ITGA6-204ENST00000412899 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
ITGA6-204ENST00000412899 UBR1Q8IWV7 1749 aa29.1■■■□□ 2.25
ITGA6-204ENST00000412899 KANK1Q14678 1352 aa29.1■■■□□ 2.25
ITGA6-204ENST00000412899 CHIC2Q9UKJ5 165 aa29.09■■■□□ 2.25
ITGA6-204ENST00000412899 TXNDC2Q86VQ3 553 aa29.07■■■□□ 2.24
ITGA6-204ENST00000412899 SCAF11Q99590 1463 aaKnown RBP29.07■■■□□ 2.24
ITGA6-204ENST00000412899 ANKRD30AQ9BXX3 1397 aa29.06■■■□□ 2.24
ITGA6-204ENST00000412899 LTKP29376 864 aa29.03■■■□□ 2.24
ITGA6-204ENST00000412899 STAG3Q9UJ98 1225 aa29.03■■■□□ 2.24
ITGA6-204ENST00000412899 EID1Q9Y6B2 187 aa29.03■■■□□ 2.24
ITGA6-204ENST00000412899 LRRC7Q96NW7 1537 aa29.03■■■□□ 2.24
ITGA6-204ENST00000412899 STRCP1A6NGW2 1772 aa29.02■■■□□ 2.24
ITGA6-204ENST00000412899 ARHGAP23Q9P227 1491 aa29.02■■■□□ 2.24
ITGA6-204ENST00000412899 SLIT1O75093 1534 aa29.01■■■□□ 2.23
ITGA6-204ENST00000412899 SYNMO15061 1565 aa28.99■■■□□ 2.23
ITGA6-204ENST00000412899 ALKQ9UM73 1620 aa28.98■■■□□ 2.23
ITGA6-204ENST00000412899 PIK3C2BO00750 1634 aa28.97■■■□□ 2.23
ITGA6-204ENST00000412899 FAM50AQ14320 339 aaKnown RBP28.95■■■□□ 2.22
ITGA6-204ENST00000412899 TMEM2Q9UHN6 1383 aa28.95■■■□□ 2.22
ITGA6-204ENST00000412899 LMTK2Q8IWU2 1503 aa28.94■■■□□ 2.22
ITGA6-204ENST00000412899 MED1Q15648 1581 aaPredicted RBP28.94■■■□□ 2.22
ITGA6-204ENST00000412899 SENP3Q9H4L4 574 aaPredicted RBP28.94■■■□□ 2.22
ITGA6-204ENST00000412899 IDI1Q13907 227 aa28.93■■■□□ 2.22
ITGA6-204ENST00000412899 EFCAB6Q5THR3 1501 aa28.9■■■□□ 2.22
ITGA6-204ENST00000412899 ADGRL2O95490 1459 aa28.89■■■□□ 2.22
ITGA6-204ENST00000412899 KDM5AP29375 1690 aaKnown RBP28.86■■■□□ 2.21
ITGA6-204ENST00000412899 NOS1P29475 1434 aa28.85■■■□□ 2.21
ITGA6-204ENST00000412899 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
ITGA6-204ENST00000412899 SLC52A1Q9NWF4 448 aa28.83■■■□□ 2.21
ITGA6-204ENST00000412899 ANKRD50Q9ULJ7 1429 aa28.83■■■□□ 2.21
ITGA6-204ENST00000412899 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
ITGA6-204ENST00000412899 ADGRB3O60242 1522 aa28.79■■■□□ 2.2
ITGA6-204ENST00000412899 KCNA6P17658 529 aa28.78■■■□□ 2.2
ITGA6-204ENST00000412899 BCANQ96GW7 911 aa28.78■■■□□ 2.2
ITGA6-204ENST00000412899 XIRP1Q702N8 1843 aaKnown RBP28.77■■■□□ 2.2
ITGA6-204ENST00000412899 RPRD2Q5VT52 1461 aaKnown RBP28.77■■■□□ 2.2
ITGA6-204ENST00000412899 TMEM94Q12767 1356 aa28.75■■■□□ 2.19
ITGA6-204ENST00000412899 TET3O43151 1660 aa28.75■■■□□ 2.19
ITGA6-204ENST00000412899 PROSER2Q86WR7 435 aaPredicted RBP28.74■■■□□ 2.19
ITGA6-204ENST00000412899 RBM33Q96EV2 1170 aaKnown RBP28.7■■■□□ 2.18
ITGA6-204ENST00000412899 HDGFP51858 240 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms