RNA–Protein interactions for RNA: ENST00000412759.2

SRGAP2C-203, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-203ENST00000412759 APLP2Q06481 763 aa25■■□□□ 1.59
SRGAP2C-203ENST00000412759 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
SRGAP2C-203ENST00000412759 FBXO31Q5XUX0 539 aaPredicted RBP24.99■■□□□ 1.59
SRGAP2C-203ENST00000412759 CAMSAP2Q08AD1 1489 aa24.98■■□□□ 1.59
SRGAP2C-203ENST00000412759 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
SRGAP2C-203ENST00000412759 THEMISQ8N1K5 641 aaPredicted RBP24.97■■□□□ 1.59
SRGAP2C-203ENST00000412759 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
SRGAP2C-203ENST00000412759 A2ML1A8K2U0 1454 aa24.96■■□□□ 1.59
SRGAP2C-203ENST00000412759 TNRQ92752 1358 aa24.96■■□□□ 1.59
SRGAP2C-203ENST00000412759 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
SRGAP2C-203ENST00000412759 MIA2Q96PC5 1412 aa24.95■■□□□ 1.58
SRGAP2C-203ENST00000412759 ANKLE2Q86XL3 938 aa24.94■■□□□ 1.58
SRGAP2C-203ENST00000412759 MYO3AQ8NEV4 1616 aa24.93■■□□□ 1.58
SRGAP2C-203ENST00000412759 ARHGEF5Q12774 1597 aa24.93■■□□□ 1.58
SRGAP2C-203ENST00000412759 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
SRGAP2C-203ENST00000412759 ZNF142P52746 1687 aaPredicted RBP24.91■■□□□ 1.58
SRGAP2C-203ENST00000412759 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
SRGAP2C-203ENST00000412759 PZPP20742 1482 aa24.89■■□□□ 1.58
SRGAP2C-203ENST00000412759 KDM5DQ9BY66 1539 aa24.89■■□□□ 1.57
SRGAP2C-203ENST00000412759 DNMT1P26358 1616 aaKnown RBP24.85■■□□□ 1.57
SRGAP2C-203ENST00000412759 TOM1O60784 492 aa24.84■■□□□ 1.57
SRGAP2C-203ENST00000412759 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
SRGAP2C-203ENST00000412759 ILDR2Q71H61 639 aa24.83■■□□□ 1.57
SRGAP2C-203ENST00000412759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.56
SRGAP2C-203ENST00000412759 SOCS7O14512 581 aa24.82■■□□□ 1.56
SRGAP2C-203ENST00000412759 MAST1Q9Y2H9 1570 aa24.79■■□□□ 1.56
SRGAP2C-203ENST00000412759 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
SRGAP2C-203ENST00000412759 SHANK2Q9UPX8 1470 aa24.76■■□□□ 1.55
SRGAP2C-203ENST00000412759 PIP4K2BP78356 416 aa24.75■■□□□ 1.55
SRGAP2C-203ENST00000412759 UGGT1Q9NYU2 1555 aa24.75■■□□□ 1.55
SRGAP2C-203ENST00000412759 CPS1P31327 1500 aa24.74■■□□□ 1.55
SRGAP2C-203ENST00000412759 NPHP4O75161 1426 aaPredicted RBP24.72■■□□□ 1.55
SRGAP2C-203ENST00000412759 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
SRGAP2C-203ENST00000412759 MED14O60244 1454 aa24.7■■□□□ 1.54
SRGAP2C-203ENST00000412759 ABCC5O15440 1437 aa24.69■■□□□ 1.54
SRGAP2C-203ENST00000412759 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
SRGAP2C-203ENST00000412759 SPATA31D1Q6ZQQ2 1576 aa24.69■■□□□ 1.54
SRGAP2C-203ENST00000412759 ABCC3O15438 1527 aa24.68■■□□□ 1.54
SRGAP2C-203ENST00000412759 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
SRGAP2C-203ENST00000412759 DUOX2Q9NRD8 1548 aa24.66■■□□□ 1.54
SRGAP2C-203ENST00000412759 RNF17Q9BXT8 1623 aaKnown RBP24.66■■□□□ 1.54
SRGAP2C-203ENST00000412759 HSPA1LP34931 641 aa24.66■■□□□ 1.54
SRGAP2C-203ENST00000412759 NEURL4Q96JN8 1562 aa24.66■■□□□ 1.54
SRGAP2C-203ENST00000412759 KIF15Q9NS87 1388 aa24.66■■□□□ 1.54
SRGAP2C-203ENST00000412759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.54
SRGAP2C-203ENST00000412759 EID1Q9Y6B2 187 aa24.65■■□□□ 1.54
SRGAP2C-203ENST00000412759 POLR1AO95602 1720 aaPredicted RBP24.64■■□□□ 1.54
SRGAP2C-203ENST00000412759 EIF2AK4Q9P2K8 1649 aaKnown RBP24.64■■□□□ 1.53
SRGAP2C-203ENST00000412759 ERVK-7P63135 1459 aa24.64■■□□□ 1.53
SRGAP2C-203ENST00000412759 DAPK1P53355 1430 aa24.63■■□□□ 1.53
SRGAP2C-203ENST00000412759 TXNDC2Q86VQ3 553 aa24.63■■□□□ 1.53
SRGAP2C-203ENST00000412759 DEPDC5O75140 1603 aa24.63■■□□□ 1.53
SRGAP2C-203ENST00000412759 KANK1Q14678 1352 aa24.63■■□□□ 1.53
SRGAP2C-203ENST00000412759 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
SRGAP2C-203ENST00000412759 STAG3Q9UJ98 1225 aa24.61■■□□□ 1.53
SRGAP2C-203ENST00000412759 ARHGAP31Q2M1Z3 1444 aa24.6■■□□□ 1.53
SRGAP2C-203ENST00000412759 ERBINQ96RT1 1412 aa24.6■■□□□ 1.53
SRGAP2C-203ENST00000412759 ANKRD30AQ9BXX3 1397 aa24.58■■□□□ 1.53
SRGAP2C-203ENST00000412759 VWDEQ8N2E2 1590 aa24.58■■□□□ 1.52
SRGAP2C-203ENST00000412759 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
SRGAP2C-203ENST00000412759 LTKP29376 864 aa24.55■■□□□ 1.52
SRGAP2C-203ENST00000412759 CROCC2H7BZ55 1655 aa24.55■■□□□ 1.52
SRGAP2C-203ENST00000412759 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
SRGAP2C-203ENST00000412759 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
SRGAP2C-203ENST00000412759 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
SRGAP2C-203ENST00000412759 MROH1Q8NDA8 1641 aa24.52■■□□□ 1.52
SRGAP2C-203ENST00000412759 IDI1Q13907 227 aa24.49■■□□□ 1.51
SRGAP2C-203ENST00000412759 LRRC7Q96NW7 1537 aa24.49■■□□□ 1.51
SRGAP2C-203ENST00000412759 ADGRL2O95490 1459 aa24.48■■□□□ 1.51
SRGAP2C-203ENST00000412759 PRDM15P57071 1507 aaPredicted RBP24.48■■□□□ 1.51
SRGAP2C-203ENST00000412759 TMEM2Q9UHN6 1383 aa24.47■■□□□ 1.51
SRGAP2C-203ENST00000412759 SLIT1O75093 1534 aa24.46■■□□□ 1.51
SRGAP2C-203ENST00000412759 ARHGAP23Q9P227 1491 aa24.46■■□□□ 1.51
SRGAP2C-203ENST00000412759 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
SRGAP2C-203ENST00000412759 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
SRGAP2C-203ENST00000412759 CEP152O94986 1710 aa24.44■■□□□ 1.5
SRGAP2C-203ENST00000412759 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
SRGAP2C-203ENST00000412759 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
SRGAP2C-203ENST00000412759 HDGFP51858 240 aaKnown RBP24.42■■□□□ 1.5
SRGAP2C-203ENST00000412759 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
SRGAP2C-203ENST00000412759 BCANQ96GW7 911 aa24.4■■□□□ 1.5
SRGAP2C-203ENST00000412759 KCNA6P17658 529 aa24.39■■□□□ 1.49
SRGAP2C-203ENST00000412759 LMTK2Q8IWU2 1503 aa24.39■■□□□ 1.49
SRGAP2C-203ENST00000412759 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
SRGAP2C-203ENST00000412759 SYNMO15061 1565 aa24.37■■□□□ 1.49
SRGAP2C-203ENST00000412759 SLC26A8Q96RN1 970 aa24.37■■□□□ 1.49
SRGAP2C-203ENST00000412759 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
SRGAP2C-203ENST00000412759 ROCK1Q13464 1354 aa24.36■■□□□ 1.49
SRGAP2C-203ENST00000412759 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
SRGAP2C-203ENST00000412759 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
SRGAP2C-203ENST00000412759 ALKQ9UM73 1620 aa24.33■■□□□ 1.49
SRGAP2C-203ENST00000412759 NOS1P29475 1434 aa24.33■■□□□ 1.49
SRGAP2C-203ENST00000412759 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
SRGAP2C-203ENST00000412759 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
SRGAP2C-203ENST00000412759 TMEM94Q12767 1356 aa24.3■■□□□ 1.48
SRGAP2C-203ENST00000412759 FAM135BQ49AJ0 1406 aa24.29■■□□□ 1.48
SRGAP2C-203ENST00000412759 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
SRGAP2C-203ENST00000412759 PPARGC1BQ86YN6 1023 aaKnown RBP24.29■■□□□ 1.48
SRGAP2C-203ENST00000412759 RPRD2Q5VT52 1461 aaKnown RBP24.29■■□□□ 1.48
SRGAP2C-203ENST00000412759 KDM5AP29375 1690 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms