RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 KANK1Q14678 1352 aa13.73□□□□□ -0.21
SMPD4-203ENST00000412570 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
SMPD4-203ENST00000412570 COL17A1Q9UMD9 1497 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-203ENST00000412570 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
SMPD4-203ENST00000412570 ABCA9Q8IUA7 1624 aa13.71□□□□□ -0.21
SMPD4-203ENST00000412570 CCDC144AA2RUR9 1427 aa13.71□□□□□ -0.21
SMPD4-203ENST00000412570 ATP7AQ04656 1500 aa13.7□□□□□ -0.22
SMPD4-203ENST00000412570 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
SMPD4-203ENST00000412570 POGZQ7Z3K3 1410 aa13.69□□□□□ -0.22
SMPD4-203ENST00000412570 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
SMPD4-203ENST00000412570 STK26Q9P289 416 aa13.68□□□□□ -0.22
SMPD4-203ENST00000412570 GCC2Q8IWJ2 1684 aa13.68□□□□□ -0.22
SMPD4-203ENST00000412570 ADGRL2O95490 1459 aa13.68□□□□□ -0.22
SMPD4-203ENST00000412570 FAM135AQ9P2D6 1515 aa13.67□□□□□ -0.22
SMPD4-203ENST00000412570 A2MP01023 1474 aa13.67□□□□□ -0.22
SMPD4-203ENST00000412570 EIF4G2P78344 907 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMPD4-203ENST00000412570 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
SMPD4-203ENST00000412570 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
SMPD4-203ENST00000412570 SHANK2Q9UPX8 1470 aa13.65□□□□□ -0.22
SMPD4-203ENST00000412570 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
SMPD4-203ENST00000412570 ADGBQ8N7X0 1667 aa13.65□□□□□ -0.22
SMPD4-203ENST00000412570 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
SMPD4-203ENST00000412570 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
SMPD4-203ENST00000412570 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
SMPD4-203ENST00000412570 C11orf95C9JLR9 678 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-203ENST00000412570 DUOX2Q9NRD8 1548 aa13.63□□□□□ -0.23
SMPD4-203ENST00000412570 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
SMPD4-203ENST00000412570 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
SMPD4-203ENST00000412570 IDI1Q13907 227 aa13.62□□□□□ -0.23
SMPD4-203ENST00000412570 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
SMPD4-203ENST00000412570 TRAK1Q9UPV9 953 aa13.6□□□□□ -0.23
SMPD4-203ENST00000412570 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
SMPD4-203ENST00000412570 RPRD2Q5VT52 1461 aaKnown RBP13.58□□□□□ -0.24
SMPD4-203ENST00000412570 ERBINQ96RT1 1412 aa13.58□□□□□ -0.24
SMPD4-203ENST00000412570 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
SMPD4-203ENST00000412570 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
SMPD4-203ENST00000412570 NEO1Q92859 1461 aa13.58□□□□□ -0.24
SMPD4-203ENST00000412570 PLA2R1Q13018 1463 aa13.57□□□□□ -0.24
SMPD4-203ENST00000412570 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
SMPD4-203ENST00000412570 TEX14Q8IWB6 1497 aa13.56□□□□□ -0.24
SMPD4-203ENST00000412570 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
SMPD4-203ENST00000412570 RBM33Q96EV2 1170 aaKnown RBP13.55□□□□□ -0.24
SMPD4-203ENST00000412570 ABCA6Q8N139 1617 aa13.54□□□□□ -0.24
SMPD4-203ENST00000412570 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
SMPD4-203ENST00000412570 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
SMPD4-203ENST00000412570 USP47Q96K76 1375 aa13.53□□□□□ -0.24
SMPD4-203ENST00000412570 WASHC2AQ641Q2 1341 aa13.52□□□□□ -0.24
SMPD4-203ENST00000412570 MAP3K4Q9Y6R4 1608 aa13.52□□□□□ -0.24
SMPD4-203ENST00000412570 NPATQ14207 1427 aa13.52□□□□□ -0.25
SMPD4-203ENST00000412570 MLH3Q9UHC1 1453 aa13.51□□□□□ -0.25
SMPD4-203ENST00000412570 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
SMPD4-203ENST00000412570 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
SMPD4-203ENST00000412570 INO80Q9ULG1 1556 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-203ENST00000412570 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
SMPD4-203ENST00000412570 ATP10AO60312 1499 aa13.5□□□□□ -0.25
SMPD4-203ENST00000412570 ARAP3Q8WWN8 1544 aa13.49□□□□□ -0.25
SMPD4-203ENST00000412570 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
SMPD4-203ENST00000412570 ANP32CO43423 234 aa13.49□□□□□ -0.25
SMPD4-203ENST00000412570 FRMPD1Q5SYB0 1578 aa13.48□□□□□ -0.25
SMPD4-203ENST00000412570 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-203ENST00000412570 DIP2CQ9Y2E4 1556 aa13.48□□□□□ -0.25
SMPD4-203ENST00000412570 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
SMPD4-203ENST00000412570 CEP152O94986 1710 aa13.48□□□□□ -0.25
SMPD4-203ENST00000412570 NOS1P29475 1434 aa13.48□□□□□ -0.25
SMPD4-203ENST00000412570 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-203ENST00000412570 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
SMPD4-203ENST00000412570 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
SMPD4-203ENST00000412570 ZMYM3Q14202 1370 aa13.46□□□□□ -0.26
SMPD4-203ENST00000412570 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-203ENST00000412570 CFAP74Q9C0B2 1584 aa13.45□□□□□ -0.26
SMPD4-203ENST00000412570 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-203ENST00000412570 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
SMPD4-203ENST00000412570 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
SMPD4-203ENST00000412570 E9PCH4 1651 aa13.44□□□□□ -0.26
SMPD4-203ENST00000412570 KDM5CP41229 1560 aa13.44□□□□□ -0.26
SMPD4-203ENST00000412570 POGKQ9P215 609 aa13.44□□□□□ -0.26
SMPD4-203ENST00000412570 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
SMPD4-203ENST00000412570 GLI2P10070 1586 aa13.43□□□□□ -0.26
SMPD4-203ENST00000412570 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
SMPD4-203ENST00000412570 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
SMPD4-203ENST00000412570 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
SMPD4-203ENST00000412570 UNC13BO14795 1591 aa13.41□□□□□ -0.26
SMPD4-203ENST00000412570 TXNDC2Q86VQ3 553 aa13.41□□□□□ -0.26
SMPD4-203ENST00000412570 HSPA2P54652 639 aa13.4□□□□□ -0.26
SMPD4-203ENST00000412570 ABCC3O15438 1527 aa13.4□□□□□ -0.26
SMPD4-203ENST00000412570 IQGAP3Q86VI3 1631 aa13.4□□□□□ -0.26
SMPD4-203ENST00000412570 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-203ENST00000412570 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
SMPD4-203ENST00000412570 CLTCL1P53675 1640 aa13.39□□□□□ -0.27
SMPD4-203ENST00000412570 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
SMPD4-203ENST00000412570 MROH1Q8NDA8 1641 aa13.38□□□□□ -0.27
SMPD4-203ENST00000412570 PRAG1Q86YV5 1406 aa13.38□□□□□ -0.27
SMPD4-203ENST00000412570 SIGLEC1Q9BZZ2 1709 aa13.38□□□□□ -0.27
SMPD4-203ENST00000412570 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
SMPD4-203ENST00000412570 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
SMPD4-203ENST00000412570 SOX12O15370 315 aa13.37□□□□□ -0.27
SMPD4-203ENST00000412570 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
SMPD4-203ENST00000412570 KDM5DQ9BY66 1539 aa13.37□□□□□ -0.27
SMPD4-203ENST00000412570 PANK3Q9H999 370 aa13.36□□□□□ -0.27
SMPD4-203ENST00000412570 SPATA31E1Q6ZUB1 1445 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms