RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
LINC00476-202ENST00000412446 AGLP35573 1532 aa13.42□□□□□ -0.26
LINC00476-202ENST00000412446 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
LINC00476-202ENST00000412446 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
LINC00476-202ENST00000412446 POLR1AO95602 1720 aaPredicted RBP13.41□□□□□ -0.26
LINC00476-202ENST00000412446 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
LINC00476-202ENST00000412446 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
LINC00476-202ENST00000412446 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
LINC00476-202ENST00000412446 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
LINC00476-202ENST00000412446 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
LINC00476-202ENST00000412446 MROH2AA6NES4 1674 aa13.39□□□□□ -0.27
LINC00476-202ENST00000412446 EFCAB2Q5VUJ9 269 aa13.38□□□□□ -0.27
LINC00476-202ENST00000412446 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
LINC00476-202ENST00000412446 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
LINC00476-202ENST00000412446 KDM5CP41229 1560 aa13.36□□□□□ -0.27
LINC00476-202ENST00000412446 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
LINC00476-202ENST00000412446 PREX2Q70Z35 1606 aa13.35□□□□□ -0.27
LINC00476-202ENST00000412446 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
LINC00476-202ENST00000412446 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
LINC00476-202ENST00000412446 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
LINC00476-202ENST00000412446 DNMT1P26358 1616 aaKnown RBP13.33□□□□□ -0.28
LINC00476-202ENST00000412446 ESF1Q9H501 851 aaKnown RBP13.32□□□□□ -0.28
LINC00476-202ENST00000412446 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
LINC00476-202ENST00000412446 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
LINC00476-202ENST00000412446 SYNMO15061 1565 aa13.31□□□□□ -0.28
LINC00476-202ENST00000412446 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
LINC00476-202ENST00000412446 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
LINC00476-202ENST00000412446 XIRP1Q702N8 1843 aaKnown RBP13.3□□□□□ -0.28
LINC00476-202ENST00000412446 ABCC1P33527 1531 aa13.3□□□□□ -0.28
LINC00476-202ENST00000412446 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
LINC00476-202ENST00000412446 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
LINC00476-202ENST00000412446 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
LINC00476-202ENST00000412446 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
LINC00476-202ENST00000412446 EP400Q96L91 3159 aa13.29□□□□□ -0.28
LINC00476-202ENST00000412446 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
LINC00476-202ENST00000412446 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
LINC00476-202ENST00000412446 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
LINC00476-202ENST00000412446 LRP6O75581 1613 aa13.27□□□□□ -0.29
LINC00476-202ENST00000412446 ITSN2Q9NZM3 1697 aa13.27□□□□□ -0.29
LINC00476-202ENST00000412446 A2ML1A8K2U0 1454 aa13.26□□□□□ -0.29
LINC00476-202ENST00000412446 LRP5O75197 1615 aa13.26□□□□□ -0.29
LINC00476-202ENST00000412446 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
LINC00476-202ENST00000412446 POLA2Q14181 598 aa13.25□□□□□ -0.29
LINC00476-202ENST00000412446 AFAP1Q8N556 730 aa13.25□□□□□ -0.29
LINC00476-202ENST00000412446 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
LINC00476-202ENST00000412446 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
LINC00476-202ENST00000412446 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
LINC00476-202ENST00000412446 RXRBP28702 533 aa13.23□□□□□ -0.29
LINC00476-202ENST00000412446 ZNF772Q68DY9 489 aaPredicted RBP13.23□□□□□ -0.29
LINC00476-202ENST00000412446 MED14O60244 1454 aa13.23□□□□□ -0.29
LINC00476-202ENST00000412446 EHBP1L1Q8N3D4 1523 aa13.22□□□□□ -0.29
LINC00476-202ENST00000412446 RGS12O14924 1447 aa13.21□□□□□ -0.3
LINC00476-202ENST00000412446 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
LINC00476-202ENST00000412446 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
LINC00476-202ENST00000412446 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
LINC00476-202ENST00000412446 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
LINC00476-202ENST00000412446 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
LINC00476-202ENST00000412446 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
LINC00476-202ENST00000412446 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
LINC00476-202ENST00000412446 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
LINC00476-202ENST00000412446 JCADQ9P266 1359 aa13.18□□□□□ -0.3
LINC00476-202ENST00000412446 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
LINC00476-202ENST00000412446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00476-202ENST00000412446 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
LINC00476-202ENST00000412446 CAPN15O75808 1086 aa13.16□□□□□ -0.3
LINC00476-202ENST00000412446 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
LINC00476-202ENST00000412446 INO80Q9ULG1 1556 aaPredicted RBP13.15□□□□□ -0.3
LINC00476-202ENST00000412446 CEP350Q5VT06 3117 aa13.15□□□□□ -0.3
LINC00476-202ENST00000412446 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
LINC00476-202ENST00000412446 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
LINC00476-202ENST00000412446 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
LINC00476-202ENST00000412446 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
LINC00476-202ENST00000412446 PLXNC1O60486 1568 aa13.14□□□□□ -0.31
LINC00476-202ENST00000412446 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
LINC00476-202ENST00000412446 TIAM1Q13009 1591 aa13.13□□□□□ -0.31
LINC00476-202ENST00000412446 YY1P25490 414 aa13.13□□□□□ -0.31
LINC00476-202ENST00000412446 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
LINC00476-202ENST00000412446 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
LINC00476-202ENST00000412446 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
LINC00476-202ENST00000412446 COL16A1Q07092 1604 aaPredicted RBP13.12□□□□□ -0.31
LINC00476-202ENST00000412446 RTEL1-TNFRSF6BF6WH68 1400 aa13.12□□□□□ -0.31
LINC00476-202ENST00000412446 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
LINC00476-202ENST00000412446 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
LINC00476-202ENST00000412446 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
LINC00476-202ENST00000412446 A2MP01023 1474 aa13.1□□□□□ -0.31
LINC00476-202ENST00000412446 MAP3K1Q13233 1512 aa13.09□□□□□ -0.31
LINC00476-202ENST00000412446 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
LINC00476-202ENST00000412446 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
LINC00476-202ENST00000412446 NUTM2DQ5VT03 806 aaPredicted RBP13.09□□□□□ -0.31
LINC00476-202ENST00000412446 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
LINC00476-202ENST00000412446 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
LINC00476-202ENST00000412446 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
LINC00476-202ENST00000412446 ATAD2Q6PL18 1390 aa13.07□□□□□ -0.32
LINC00476-202ENST00000412446 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
LINC00476-202ENST00000412446 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
LINC00476-202ENST00000412446 SPATA31A6Q5VVP1 1343 aa13.07□□□□□ -0.32
LINC00476-202ENST00000412446 CCDC141Q6ZP82 1450 aa13.06□□□□□ -0.32
LINC00476-202ENST00000412446 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
LINC00476-202ENST00000412446 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
LINC00476-202ENST00000412446 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms