RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
DDR1-230ENST00000412274 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
DDR1-230ENST00000412274 KDM5DQ9BY66 1539 aa24.92■■□□□ 1.58
DDR1-230ENST00000412274 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
DDR1-230ENST00000412274 FAM50AQ14320 339 aaKnown RBP24.92■■□□□ 1.58
DDR1-230ENST00000412274 ERBINQ96RT1 1412 aa24.92■■□□□ 1.58
DDR1-230ENST00000412274 RNF17Q9BXT8 1623 aaKnown RBP24.91■■□□□ 1.58
DDR1-230ENST00000412274 RRP7BPQ9NSQ0 103 aa24.88■■□□□ 1.57
DDR1-230ENST00000412274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.88■■□□□ 1.57
DDR1-230ENST00000412274 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
DDR1-230ENST00000412274 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
DDR1-230ENST00000412274 ADGRL2O95490 1459 aa24.86■■□□□ 1.57
DDR1-230ENST00000412274 HSPA2P54652 639 aa24.86■■□□□ 1.57
DDR1-230ENST00000412274 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
DDR1-230ENST00000412274 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
DDR1-230ENST00000412274 DMRT2Q9Y5R5 561 aa24.83■■□□□ 1.57
DDR1-230ENST00000412274 PZPP20742 1482 aa24.83■■□□□ 1.56
DDR1-230ENST00000412274 ABCC3O15438 1527 aa24.78■■□□□ 1.56
DDR1-230ENST00000412274 KANK1Q14678 1352 aa24.78■■□□□ 1.56
DDR1-230ENST00000412274 PRDM15P57071 1507 aaPredicted RBP24.77■■□□□ 1.56
DDR1-230ENST00000412274 ROCK1Q13464 1354 aa24.77■■□□□ 1.56
DDR1-230ENST00000412274 MROH1Q8NDA8 1641 aa24.76■■□□□ 1.55
DDR1-230ENST00000412274 DEPDC5O75140 1603 aa24.75■■□□□ 1.55
DDR1-230ENST00000412274 TNRQ92752 1358 aa24.75■■□□□ 1.55
DDR1-230ENST00000412274 MYO3AQ8NEV4 1616 aa24.75■■□□□ 1.55
DDR1-230ENST00000412274 ZNF142P52746 1687 aaPredicted RBP24.75■■□□□ 1.55
DDR1-230ENST00000412274 PPARGC1BQ86YN6 1023 aaKnown RBP24.74■■□□□ 1.55
DDR1-230ENST00000412274 ANKRD50Q9ULJ7 1429 aa24.72■■□□□ 1.55
DDR1-230ENST00000412274 CEP170BQ9Y4F5 1589 aaPredicted RBP24.71■■□□□ 1.55
DDR1-230ENST00000412274 A2ML1A8K2U0 1454 aa24.71■■□□□ 1.55
DDR1-230ENST00000412274 ARHGAP31Q2M1Z3 1444 aa24.71■■□□□ 1.55
DDR1-230ENST00000412274 NLRP1Q9C000 1473 aa24.7■■□□□ 1.55
DDR1-230ENST00000412274 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.55
DDR1-230ENST00000412274 FBXO31Q5XUX0 539 aaPredicted RBP24.7■■□□□ 1.54
DDR1-230ENST00000412274 PLA2R1Q13018 1463 aa24.69■■□□□ 1.54
DDR1-230ENST00000412274 CAMSAP1Q5T5Y3 1602 aa24.68■■□□□ 1.54
DDR1-230ENST00000412274 STRCQ7RTU9 1775 aa24.68■■□□□ 1.54
DDR1-230ENST00000412274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.68■■□□□ 1.54
DDR1-230ENST00000412274 PTPRTO14522 1441 aa24.68■■□□□ 1.54
DDR1-230ENST00000412274 LMTK2Q8IWU2 1503 aa24.67■■□□□ 1.54
DDR1-230ENST00000412274 SPATA31D1Q6ZQQ2 1576 aa24.67■■□□□ 1.54
DDR1-230ENST00000412274 CEP152O94986 1710 aa24.66■■□□□ 1.54
DDR1-230ENST00000412274 PKD2Q13563 968 aa24.66■■□□□ 1.54
DDR1-230ENST00000412274 VWDEQ8N2E2 1590 aa24.65■■□□□ 1.54
DDR1-230ENST00000412274 ERVK-7P63135 1459 aa24.64■■□□□ 1.53
DDR1-230ENST00000412274 THEMISQ8N1K5 641 aaPredicted RBP24.63■■□□□ 1.53
DDR1-230ENST00000412274 ITGAEP38570 1179 aa24.6■■□□□ 1.53
DDR1-230ENST00000412274 UGGT1Q9NYU2 1555 aa24.58■■□□□ 1.52
DDR1-230ENST00000412274 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
DDR1-230ENST00000412274 UNC13BO14795 1591 aa24.55■■□□□ 1.52
DDR1-230ENST00000412274 EFCAB6Q5THR3 1501 aa24.55■■□□□ 1.52
DDR1-230ENST00000412274 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
DDR1-230ENST00000412274 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
DDR1-230ENST00000412274 TET3O43151 1660 aa24.5■■□□□ 1.51
DDR1-230ENST00000412274 CFAP65Q6ZU64 1925 aaKnown RBP24.5■■□□□ 1.51
DDR1-230ENST00000412274 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
DDR1-230ENST00000412274 NOS1P29475 1434 aa24.48■■□□□ 1.51
DDR1-230ENST00000412274 GCC2Q8IWJ2 1684 aa24.47■■□□□ 1.51
DDR1-230ENST00000412274 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
DDR1-230ENST00000412274 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
DDR1-230ENST00000412274 NUP155O75694 1391 aa24.46■■□□□ 1.51
DDR1-230ENST00000412274 CERKQ8TCT0 537 aa24.46■■□□□ 1.51
DDR1-230ENST00000412274 FBXO41Q8TF61 875 aa24.46■■□□□ 1.51
DDR1-230ENST00000412274 KDM5AP29375 1690 aaKnown RBP24.46■■□□□ 1.51
DDR1-230ENST00000412274 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
DDR1-230ENST00000412274 MED14O60244 1454 aa24.44■■□□□ 1.5
DDR1-230ENST00000412274 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
DDR1-230ENST00000412274 NAIPQ13075 1403 aa24.43■■□□□ 1.5
DDR1-230ENST00000412274 ILDR1Q86SU0 546 aaPredicted RBP24.42■■□□□ 1.5
DDR1-230ENST00000412274 HFM1A2PYH4 1435 aa24.42■■□□□ 1.5
DDR1-230ENST00000412274 IDI1Q13907 227 aa24.41■■□□□ 1.5
DDR1-230ENST00000412274 EID1Q9Y6B2 187 aa24.4■■□□□ 1.5
DDR1-230ENST00000412274 SLIT1O75093 1534 aa24.4■■□□□ 1.5
DDR1-230ENST00000412274 SYNMO15061 1565 aa24.39■■□□□ 1.5
DDR1-230ENST00000412274 NEURL4Q96JN8 1562 aa24.38■■□□□ 1.49
DDR1-230ENST00000412274 PIK3C2BO00750 1634 aa24.38■■□□□ 1.49
DDR1-230ENST00000412274 ARHGAP23Q9P227 1491 aa24.38■■□□□ 1.49
DDR1-230ENST00000412274 ACIN1Q9UKV3 1341 aaKnown RBP24.37■■□□□ 1.49
DDR1-230ENST00000412274 NPHP4O75161 1426 aaPredicted RBP24.37■■□□□ 1.49
DDR1-230ENST00000412274 IQSEC2Q5JU85 1478 aa24.37■■□□□ 1.49
DDR1-230ENST00000412274 LTBP4Q8N2S1 1624 aa24.36■■□□□ 1.49
DDR1-230ENST00000412274 E9PCH4 1651 aa24.35■■□□□ 1.49
DDR1-230ENST00000412274 SCAF11Q99590 1463 aaKnown RBP24.35■■□□□ 1.49
DDR1-230ENST00000412274 TMEM2Q9UHN6 1383 aa24.35■■□□□ 1.49
DDR1-230ENST00000412274 TXNDC2Q86VQ3 553 aa24.34■■□□□ 1.49
DDR1-230ENST00000412274 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.49
DDR1-230ENST00000412274 ADGRB3O60242 1522 aa24.33■■□□□ 1.49
DDR1-230ENST00000412274 IQGAP1P46940 1657 aa24.33■■□□□ 1.49
DDR1-230ENST00000412274 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
DDR1-230ENST00000412274 CPS1P31327 1500 aa24.27■■□□□ 1.48
DDR1-230ENST00000412274 LTKP29376 864 aa24.27■■□□□ 1.48
DDR1-230ENST00000412274 TRIM52Q96A61 297 aa24.26■■□□□ 1.47
DDR1-230ENST00000412274 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.23■■□□□ 1.47
DDR1-230ENST00000412274 TMEM131LA2VDJ0 1609 aa24.23■■□□□ 1.47
DDR1-230ENST00000412274 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
DDR1-230ENST00000412274 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
DDR1-230ENST00000412274 SLC4A1APQ9BWU0 796 aaKnown RBP24.19■■□□□ 1.46
DDR1-230ENST00000412274 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
DDR1-230ENST00000412274 RIMS2Q9UQ26 1411 aa24.17■■□□□ 1.46
DDR1-230ENST00000412274 PPP1R15AO75807 674 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms