RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 MAGI2Q86UL8 1455 aa16.89■□□□□ 0.29
SNRNP35-202ENST00000412157 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
SNRNP35-202ENST00000412157 FAM135AQ9P2D6 1515 aa16.88■□□□□ 0.29
SNRNP35-202ENST00000412157 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
SNRNP35-202ENST00000412157 A2MP01023 1474 aa16.86■□□□□ 0.29
SNRNP35-202ENST00000412157 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
SNRNP35-202ENST00000412157 BCORL1Q5H9F3 1711 aa16.85■□□□□ 0.29
SNRNP35-202ENST00000412157 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
SNRNP35-202ENST00000412157 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
SNRNP35-202ENST00000412157 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
SNRNP35-202ENST00000412157 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
SNRNP35-202ENST00000412157 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
SNRNP35-202ENST00000412157 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.28
SNRNP35-202ENST00000412157 TET3O43151 1660 aa16.81■□□□□ 0.28
SNRNP35-202ENST00000412157 PRDM15P57071 1507 aaPredicted RBP16.81■□□□□ 0.28
SNRNP35-202ENST00000412157 PTPRMP28827 1452 aa16.81■□□□□ 0.28
SNRNP35-202ENST00000412157 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
SNRNP35-202ENST00000412157 KANK1Q14678 1352 aa16.8■□□□□ 0.28
SNRNP35-202ENST00000412157 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
SNRNP35-202ENST00000412157 ARID4BQ4LE39 1312 aaPredicted RBP16.8■□□□□ 0.28
SNRNP35-202ENST00000412157 PKD2Q13563 968 aa16.8■□□□□ 0.28
SNRNP35-202ENST00000412157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNRNP35-202ENST00000412157 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
SNRNP35-202ENST00000412157 MROH1Q8NDA8 1641 aa16.79■□□□□ 0.28
SNRNP35-202ENST00000412157 FOXD1Q16676 465 aa16.79■□□□□ 0.28
SNRNP35-202ENST00000412157 CEP152O94986 1710 aa16.79■□□□□ 0.28
SNRNP35-202ENST00000412157 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
SNRNP35-202ENST00000412157 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.28
SNRNP35-202ENST00000412157 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
SNRNP35-202ENST00000412157 E9PCH4 1651 aa16.77■□□□□ 0.28
SNRNP35-202ENST00000412157 KIF3BO15066 747 aa16.76■□□□□ 0.27
SNRNP35-202ENST00000412157 MADDQ8WXG6 1647 aa16.76■□□□□ 0.27
SNRNP35-202ENST00000412157 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
SNRNP35-202ENST00000412157 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
SNRNP35-202ENST00000412157 ARHGEF40Q8TER5 1519 aa16.74■□□□□ 0.27
SNRNP35-202ENST00000412157 YEATS2Q9ULM3 1422 aa16.73■□□□□ 0.27
SNRNP35-202ENST00000412157 ZC3H13Q5T200 1668 aaKnown RBP16.73■□□□□ 0.27
SNRNP35-202ENST00000412157 PLPPR3Q6T4P5 718 aa16.72■□□□□ 0.27
SNRNP35-202ENST00000412157 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
SNRNP35-202ENST00000412157 ATP10AO60312 1499 aa16.71■□□□□ 0.27
SNRNP35-202ENST00000412157 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
SNRNP35-202ENST00000412157 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
SNRNP35-202ENST00000412157 CAMSAP1Q5T5Y3 1602 aa16.68■□□□□ 0.26
SNRNP35-202ENST00000412157 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
SNRNP35-202ENST00000412157 LMTK3Q96Q04 1460 aa16.67■□□□□ 0.26
SNRNP35-202ENST00000412157 PPP1R15AO75807 674 aaPredicted RBP16.67■□□□□ 0.26
SNRNP35-202ENST00000412157 TRPM2O94759 1503 aa16.66■□□□□ 0.26
SNRNP35-202ENST00000412157 AGLP35573 1532 aa16.66■□□□□ 0.26
SNRNP35-202ENST00000412157 ABCC3O15438 1527 aa16.65■□□□□ 0.26
SNRNP35-202ENST00000412157 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.25
SNRNP35-202ENST00000412157 KIF1BO60333 1816 aa16.63■□□□□ 0.25
SNRNP35-202ENST00000412157 GGT6Q6P531 493 aa16.63■□□□□ 0.25
SNRNP35-202ENST00000412157 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
SNRNP35-202ENST00000412157 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
SNRNP35-202ENST00000412157 CLTCL1P53675 1640 aa16.61■□□□□ 0.25
SNRNP35-202ENST00000412157 HSPA2P54652 639 aa16.61■□□□□ 0.25
SNRNP35-202ENST00000412157 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
SNRNP35-202ENST00000412157 SIGLEC1Q9BZZ2 1709 aa16.61■□□□□ 0.25
SNRNP35-202ENST00000412157 PTPRTO14522 1441 aa16.6■□□□□ 0.25
SNRNP35-202ENST00000412157 MLECQ14165 292 aa16.59■□□□□ 0.25
SNRNP35-202ENST00000412157 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
SNRNP35-202ENST00000412157 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.24
SNRNP35-202ENST00000412157 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
SNRNP35-202ENST00000412157 NPATQ14207 1427 aa16.55■□□□□ 0.24
SNRNP35-202ENST00000412157 PREX1Q8TCU6 1659 aa16.55■□□□□ 0.24
SNRNP35-202ENST00000412157 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
SNRNP35-202ENST00000412157 ARHGAP31Q2M1Z3 1444 aa16.54■□□□□ 0.24
SNRNP35-202ENST00000412157 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
SNRNP35-202ENST00000412157 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
SNRNP35-202ENST00000412157 MROH2AA6NES4 1674 aa16.52■□□□□ 0.23
SNRNP35-202ENST00000412157 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
SNRNP35-202ENST00000412157 PIK3C2BO00750 1634 aa16.5■□□□□ 0.23
SNRNP35-202ENST00000412157 SPATA31E1Q6ZUB1 1445 aa16.5■□□□□ 0.23
SNRNP35-202ENST00000412157 UGGT1Q9NYU2 1555 aa16.5■□□□□ 0.23
SNRNP35-202ENST00000412157 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
SNRNP35-202ENST00000412157 SYNMO15061 1565 aa16.49■□□□□ 0.23
SNRNP35-202ENST00000412157 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
SNRNP35-202ENST00000412157 NOS1P29475 1434 aa16.48■□□□□ 0.23
SNRNP35-202ENST00000412157 CERKQ8TCT0 537 aa16.48■□□□□ 0.23
SNRNP35-202ENST00000412157 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
SNRNP35-202ENST00000412157 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
SNRNP35-202ENST00000412157 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
SNRNP35-202ENST00000412157 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
SNRNP35-202ENST00000412157 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
SNRNP35-202ENST00000412157 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
SNRNP35-202ENST00000412157 ESF1Q9H501 851 aaKnown RBP16.46■□□□□ 0.23
SNRNP35-202ENST00000412157 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
SNRNP35-202ENST00000412157 PPLO60437 1756 aa16.45■□□□□ 0.22
SNRNP35-202ENST00000412157 ERVK-7P63135 1459 aa16.44■□□□□ 0.22
SNRNP35-202ENST00000412157 MYO5BQ9ULV0 1848 aa16.44■□□□□ 0.22
SNRNP35-202ENST00000412157 POLR1AO95602 1720 aaPredicted RBP16.44■□□□□ 0.22
SNRNP35-202ENST00000412157 LAMC1P11047 1609 aa16.44■□□□□ 0.22
SNRNP35-202ENST00000412157 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
SNRNP35-202ENST00000412157 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
SNRNP35-202ENST00000412157 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
SNRNP35-202ENST00000412157 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
SNRNP35-202ENST00000412157 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
SNRNP35-202ENST00000412157 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNRNP35-202ENST00000412157 DIEXFQ68CQ4 756 aaKnown RBP16.41■□□□□ 0.22
SNRNP35-202ENST00000412157 MYOM2P54296 1465 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms