RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SOGA1O94964 1423 aa14.01□□□□□ -0.17
PRPF40A-202ENST00000410080 AMOTL1Q8IY63 956 aa14□□□□□ -0.17
PRPF40A-202ENST00000410080 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
PRPF40A-202ENST00000410080 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
PRPF40A-202ENST00000410080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14□□□□□ -0.178e-7■■■■■ 72.3
PRPF40A-202ENST00000410080 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-202ENST00000410080 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
PRPF40A-202ENST00000410080 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-202ENST00000410080 TPM3P06753 285 aa13.99□□□□□ -0.17
PRPF40A-202ENST00000410080 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
PRPF40A-202ENST00000410080 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
PRPF40A-202ENST00000410080 TSR1Q2NL82 804 aaKnown RBP13.98□□□□□ -0.17
PRPF40A-202ENST00000410080 TNNT3P45378 269 aaPredicted RBP13.98□□□□□ -0.17
PRPF40A-202ENST00000410080 SYAP1Q96A49 352 aaPredicted RBP13.98□□□□□ -0.17
PRPF40A-202ENST00000410080 DHX16O60231 1041 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-202ENST00000410080 H3BQV1 296 aa13.97□□□□□ -0.17
PRPF40A-202ENST00000410080 IFFO2Q5TF58 517 aa13.97□□□□□ -0.17
PRPF40A-202ENST00000410080 CCDC43Q96MW1 224 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-202ENST00000410080 C1orf141Q5JVX7 400 aa13.96□□□□□ -0.17
PRPF40A-202ENST00000410080 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
PRPF40A-202ENST00000410080 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.182e-7■■■■■ 36.2
PRPF40A-202ENST00000410080 TPM2P07951 284 aa13.95□□□□□ -0.18
PRPF40A-202ENST00000410080 PCMTD1Q96MG8 357 aaPredicted RBP13.95□□□□□ -0.18
PRPF40A-202ENST00000410080 CARMIL2Q6F5E8 1435 aa13.95□□□□□ -0.18
PRPF40A-202ENST00000410080 MFAP1P55081 439 aaKnown RBP13.94□□□□□ -0.18
PRPF40A-202ENST00000410080 KIF16BQ96L93 1317 aa13.94□□□□□ -0.18
PRPF40A-202ENST00000410080 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
PRPF40A-202ENST00000410080 CCAR2Q8N163 923 aaKnown RBP13.94□□□□□ -0.18
PRPF40A-202ENST00000410080 SMC4Q9NTJ3 1288 aa13.94□□□□□ -0.18
PRPF40A-202ENST00000410080 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
PRPF40A-202ENST00000410080 CSPP1Q1MSJ5 1256 aa13.93□□□□□ -0.18
PRPF40A-202ENST00000410080 SLKQ9H2G2 1235 aaPredicted RBP13.93□□□□□ -0.18
PRPF40A-202ENST00000410080 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
PRPF40A-202ENST00000410080 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
PRPF40A-202ENST00000410080 APPP05067 770 aa13.92□□□□□ -0.18
PRPF40A-202ENST00000410080 SETD5Q9C0A6 1442 aa13.92□□□□□ -0.18
PRPF40A-202ENST00000410080 KIF3BO15066 747 aa13.92□□□□□ -0.18
PRPF40A-202ENST00000410080 CCAR1Q8IX12 1150 aaKnown RBP13.92□□□□□ -0.18
PRPF40A-202ENST00000410080 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
PRPF40A-202ENST00000410080 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
PRPF40A-202ENST00000410080 NUP155O75694 1391 aa13.91□□□□□ -0.18
PRPF40A-202ENST00000410080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
PRPF40A-202ENST00000410080 MCTP1Q6DN14 999 aa13.9□□□□□ -0.18
PRPF40A-202ENST00000410080 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
PRPF40A-202ENST00000410080 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.18
PRPF40A-202ENST00000410080 HMMRO75330 724 aa13.89□□□□□ -0.19
PRPF40A-202ENST00000410080 FYB1O15117 783 aa13.89□□□□□ -0.19
PRPF40A-202ENST00000410080 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
PRPF40A-202ENST00000410080 WIZO95785 1651 aa13.89□□□□□ -0.19
PRPF40A-202ENST00000410080 PAF1Q8N7H5 531 aa13.89□□□□□ -0.19
PRPF40A-202ENST00000410080 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 PTMSP20962 102 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 ODF2Q5BJF6 829 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
PRPF40A-202ENST00000410080 EIF3AQ14152 1382 aaKnown RBP13.87□□□□□ -0.19
PRPF40A-202ENST00000410080 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
PRPF40A-202ENST00000410080 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
PRPF40A-202ENST00000410080 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
PRPF40A-202ENST00000410080 SLC4A3P48751 1232 aa13.86□□□□□ -0.19
PRPF40A-202ENST00000410080 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-202ENST00000410080 TERF2IPQ9NYB0 399 aa13.86□□□□□ -0.19
PRPF40A-202ENST00000410080 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-202ENST00000410080 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
PRPF40A-202ENST00000410080 R3HCC1Q9Y3T6 440 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-202ENST00000410080 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
PRPF40A-202ENST00000410080 TPM1P09493 284 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 PHF14O94880 888 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 ZFYVE27Q5T4F4 411 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 IKQ13123 557 aaPredicted RBP13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 CT47A1Q5JQC4 288 aaPredicted RBP13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 PSME1Q06323 249 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 KIF3AQ9Y496 699 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 TRIM29Q14134 588 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
PRPF40A-202ENST00000410080 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
PRPF40A-202ENST00000410080 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
PRPF40A-202ENST00000410080 CCDC70Q6NSX1 233 aa13.83□□□□□ -0.2
PRPF40A-202ENST00000410080 TRAK1Q9UPV9 953 aa13.83□□□□□ -0.2
PRPF40A-202ENST00000410080 FOSBP53539 338 aa13.82□□□□□ -0.2
PRPF40A-202ENST00000410080 VSIG10Q8N0Z9 540 aa13.82□□□□□ -0.2
PRPF40A-202ENST00000410080 ANKRD30AQ9BXX3 1397 aa13.82□□□□□ -0.2
PRPF40A-202ENST00000410080 CCDC27Q2M243 656 aa13.82□□□□□ -0.2
PRPF40A-202ENST00000410080 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
PRPF40A-202ENST00000410080 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
PRPF40A-202ENST00000410080 NFXL1Q6ZNB6 911 aa13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 EPS15P42566 896 aa13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 NAP1L1P55209 391 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-202ENST00000410080 ST18O60284 1047 aa13.8□□□□□ -0.2
PRPF40A-202ENST00000410080 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms