RNA–Protein interactions for RNA: ENST00000410070.6

RIMKLA-201, Transcript of ribosomal modification protein rimK like family member A, humanhuman

TSL 3

Gene RIMKLA, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-201ENST00000410070 DNMT1P26358 1616 aaKnown RBP36.3■■■■□ 3.4
RIMKLA-201ENST00000410070 VPS8Q8N3P4 1428 aa36.28■■■■□ 3.4
RIMKLA-201ENST00000410070 LRRC9Q6ZRR7 1453 aa36.28■■■■□ 3.4
RIMKLA-201ENST00000410070 KDM5DQ9BY66 1539 aa36.28■■■■□ 3.4
RIMKLA-201ENST00000410070 PZPP20742 1482 aa36.27■■■■□ 3.4
RIMKLA-201ENST00000410070 FBXO31Q5XUX0 539 aaPredicted RBP36.26■■■■□ 3.4
RIMKLA-201ENST00000410070 TNRQ92752 1358 aa36.23■■■■□ 3.39
RIMKLA-201ENST00000410070 LOC105371045A0A1W2PR82 267 aa36.21■■■■□ 3.39
RIMKLA-201ENST00000410070 MAP3K1Q13233 1512 aa36.19■■■■□ 3.38
RIMKLA-201ENST00000410070 WASHC2CQ9Y4E1 1318 aa36.19■■■■□ 3.38
RIMKLA-201ENST00000410070 TSPY4P0CV99 314 aa36.18■■■■□ 3.38
RIMKLA-201ENST00000410070 TSPY10P0CW01 314 aa36.18■■■■□ 3.38
RIMKLA-201ENST00000410070 MAST1Q9Y2H9 1570 aa36.17■■■■□ 3.38
RIMKLA-201ENST00000410070 NEURL4Q96JN8 1562 aa36.15■■■■□ 3.38
RIMKLA-201ENST00000410070 DISP3Q9P2K9 1392 aa36.15■■■■□ 3.38
RIMKLA-201ENST00000410070 KANK4Q5T7N3 995 aaPredicted RBP36.14■■■■□ 3.38
RIMKLA-201ENST00000410070 MIA2Q96PC5 1412 aa36.14■■■■□ 3.38
RIMKLA-201ENST00000410070 RNF17Q9BXT8 1623 aaKnown RBP36.12■■■■□ 3.37
RIMKLA-201ENST00000410070 ILDR2Q71H61 639 aa36.11■■■■□ 3.37
RIMKLA-201ENST00000410070 NLRP1Q9C000 1473 aa36.09■■■■□ 3.37
RIMKLA-201ENST00000410070 POLR1AO95602 1720 aaPredicted RBP36.08■■■■□ 3.37
RIMKLA-201ENST00000410070 MYOM3Q5VTT5 1437 aa36.06■■■■□ 3.36
RIMKLA-201ENST00000410070 ABCC3O15438 1527 aa36.05■■■■□ 3.36
RIMKLA-201ENST00000410070 UBAP1LF5GYI3 381 aa36.05■■■■□ 3.36
RIMKLA-201ENST00000410070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.02■■■■□ 3.36
RIMKLA-201ENST00000410070 MROH1Q8NDA8 1641 aa36.02■■■■□ 3.36
RIMKLA-201ENST00000410070 EIF2AK4Q9P2K8 1649 aaKnown RBP36.02■■■■□ 3.36
RIMKLA-201ENST00000410070 THEMISQ8N1K5 641 aaPredicted RBP36.02■■■■□ 3.36
RIMKLA-201ENST00000410070 MED14O60244 1454 aa36.01■■■■□ 3.36
RIMKLA-201ENST00000410070 SPATA31D1Q6ZQQ2 1576 aa36.01■■■■□ 3.35
RIMKLA-201ENST00000410070 ANKLE2Q86XL3 938 aa36■■■■□ 3.35
RIMKLA-201ENST00000410070 UGGT1Q9NYU2 1555 aa36■■■■□ 3.35
RIMKLA-201ENST00000410070 ZC3H13Q5T200 1668 aaKnown RBP35.99■■■■□ 3.35
RIMKLA-201ENST00000410070 SHANK2Q9UPX8 1470 aa35.99■■■■□ 3.35
RIMKLA-201ENST00000410070 CPS1P31327 1500 aa35.97■■■■□ 3.35
RIMKLA-201ENST00000410070 DEPDC5O75140 1603 aa35.97■■■■□ 3.35
RIMKLA-201ENST00000410070 VWDEQ8N2E2 1590 aa35.95■■■■□ 3.35
RIMKLA-201ENST00000410070 ERVK-7P63135 1459 aa35.93■■■■□ 3.34
RIMKLA-201ENST00000410070 DUOX2Q9NRD8 1548 aa35.92■■■■□ 3.34
RIMKLA-201ENST00000410070 NPHP4O75161 1426 aaPredicted RBP35.91■■■■□ 3.34
RIMKLA-201ENST00000410070 SOCS7O14512 581 aa35.89■■■■□ 3.34
RIMKLA-201ENST00000410070 ABCC5O15440 1437 aa35.87■■■■□ 3.33
RIMKLA-201ENST00000410070 CEP152O94986 1710 aa35.83■■■■□ 3.33
RIMKLA-201ENST00000410070 KIF15Q9NS87 1388 aa35.82■■■■□ 3.32
RIMKLA-201ENST00000410070 PRDM15P57071 1507 aaPredicted RBP35.82■■■■□ 3.32
RIMKLA-201ENST00000410070 ARHGAP31Q2M1Z3 1444 aa35.82■■■■□ 3.32
RIMKLA-201ENST00000410070 IQGAP1P46940 1657 aa35.81■■■■□ 3.32
RIMKLA-201ENST00000410070 CROCC2H7BZ55 1655 aa35.8■■■■□ 3.32
RIMKLA-201ENST00000410070 ERBINQ96RT1 1412 aa35.8■■■■□ 3.32
RIMKLA-201ENST00000410070 PTPN23Q9H3S7 1636 aa35.79■■■■□ 3.32
RIMKLA-201ENST00000410070 TOM1O60784 492 aa35.78■■■■□ 3.32
RIMKLA-201ENST00000410070 ALKQ9UM73 1620 aa35.78■■■■□ 3.32
RIMKLA-201ENST00000410070 UBR1Q8IWV7 1749 aa35.77■■■■□ 3.32
RIMKLA-201ENST00000410070 DAPK1P53355 1430 aa35.74■■■■□ 3.31
RIMKLA-201ENST00000410070 HSPA1LP34931 641 aa35.74■■■■□ 3.31
RIMKLA-201ENST00000410070 RRP7BPQ9NSQ0 103 aa35.73■■■■□ 3.31
RIMKLA-201ENST00000410070 STRCP1A6NGW2 1772 aa35.73■■■■□ 3.31
RIMKLA-201ENST00000410070 FGD6Q6ZV73 1430 aa35.73■■■■□ 3.31
RIMKLA-201ENST00000410070 ARHGAP23Q9P227 1491 aa35.73■■■■□ 3.31
RIMKLA-201ENST00000410070 CFAP65Q6ZU64 1925 aaKnown RBP35.71■■■■□ 3.31
RIMKLA-201ENST00000410070 SLIT1O75093 1534 aa35.7■■■■□ 3.31
RIMKLA-201ENST00000410070 PIP4K2BP78356 416 aa35.7■■■■□ 3.31
RIMKLA-201ENST00000410070 LRRC7Q96NW7 1537 aa35.68■■■■□ 3.3
RIMKLA-201ENST00000410070 SCAF11Q99590 1463 aaKnown RBP35.67■■■■□ 3.3
RIMKLA-201ENST00000410070 LTKP29376 864 aa35.67■■■■□ 3.3
RIMKLA-201ENST00000410070 APLP2Q06481 763 aa35.64■■■■□ 3.3
RIMKLA-201ENST00000410070 LMTK2Q8IWU2 1503 aa35.62■■■■□ 3.29
RIMKLA-201ENST00000410070 SCAF1Q9H7N4 1312 aaKnown RBP35.62■■■■□ 3.29
RIMKLA-201ENST00000410070 SYNMO15061 1565 aa35.6■■■■□ 3.29
RIMKLA-201ENST00000410070 ANKRD30AQ9BXX3 1397 aa35.59■■■■□ 3.29
RIMKLA-201ENST00000410070 TXNDC2Q86VQ3 553 aa35.58■■■■□ 3.29
RIMKLA-201ENST00000410070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.58■■■■□ 3.29
RIMKLA-201ENST00000410070 PIK3C2BO00750 1634 aa35.56■■■■□ 3.28
RIMKLA-201ENST00000410070 MED1Q15648 1581 aaPredicted RBP35.55■■■■□ 3.28
RIMKLA-201ENST00000410070 KANK1Q14678 1352 aa35.55■■■■□ 3.28
RIMKLA-201ENST00000410070 TMEM2Q9UHN6 1383 aa35.55■■■■□ 3.28
RIMKLA-201ENST00000410070 CHIC2Q9UKJ5 165 aa35.54■■■■□ 3.28
RIMKLA-201ENST00000410070 ADGRL2O95490 1459 aa35.53■■■■□ 3.28
RIMKLA-201ENST00000410070 KDM5AP29375 1690 aaKnown RBP35.52■■■■□ 3.28
RIMKLA-201ENST00000410070 IDI1Q13907 227 aa35.5■■■■□ 3.27
RIMKLA-201ENST00000410070 NOS1P29475 1434 aa35.49■■■■□ 3.27
RIMKLA-201ENST00000410070 EID1Q9Y6B2 187 aa35.48■■■■□ 3.27
RIMKLA-201ENST00000410070 EFCAB6Q5THR3 1501 aa35.46■■■■□ 3.27
RIMKLA-201ENST00000410070 XIRP1Q702N8 1843 aaKnown RBP35.43■■■■□ 3.26
RIMKLA-201ENST00000410070 TET3O43151 1660 aa35.41■■■■□ 3.26
RIMKLA-201ENST00000410070 STAG3Q9UJ98 1225 aa35.37■■■■□ 3.25
RIMKLA-201ENST00000410070 ANKRD50Q9ULJ7 1429 aa35.35■■■■□ 3.25
RIMKLA-201ENST00000410070 SLC52A1Q9NWF4 448 aa35.35■■■■□ 3.25
RIMKLA-201ENST00000410070 ADGRB3O60242 1522 aa35.35■■■■□ 3.25
RIMKLA-201ENST00000410070 RPRD2Q5VT52 1461 aaKnown RBP35.34■■■■□ 3.25
RIMKLA-201ENST00000410070 KCNA6P17658 529 aa35.31■■■■□ 3.24
RIMKLA-201ENST00000410070 FAM50AQ14320 339 aaKnown RBP35.3■■■■□ 3.24
RIMKLA-201ENST00000410070 TMEM94Q12767 1356 aa35.27■■■■□ 3.24
RIMKLA-201ENST00000410070 FAM135BQ49AJ0 1406 aa35.27■■■■□ 3.24
RIMKLA-201ENST00000410070 SLC26A8Q96RN1 970 aa35.27■■■■□ 3.24
RIMKLA-201ENST00000410070 ZFYVE9O95405 1425 aa35.24■■■■□ 3.23
RIMKLA-201ENST00000410070 NWD1Q149M9 1564 aa35.22■■■■□ 3.23
RIMKLA-201ENST00000410070 SENP3Q9H4L4 574 aaPredicted RBP35.21■■■■□ 3.23
RIMKLA-201ENST00000410070 UNC13BO14795 1591 aa35.19■■■■□ 3.22
RIMKLA-201ENST00000410070 NKTRP30414 1462 aaKnown RBP35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms