RNA–Protein interactions for RNA: ENST00000409908.5

MDH1-203, Transcript of malate dehydrogenase 1, humanhuman

TSL 3 BASIC

Gene MDH1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-203ENST00000409908 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
MDH1-203ENST00000409908 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
MDH1-203ENST00000409908 A2MP01023 1474 aa16.42■□□□□ 0.22
MDH1-203ENST00000409908 RTEL1-TNFRSF6BF6WH68 1400 aa16.42■□□□□ 0.22
MDH1-203ENST00000409908 DHX29Q7Z478 1369 aaKnown RBP16.41■□□□□ 0.22
MDH1-203ENST00000409908 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
MDH1-203ENST00000409908 INO80Q9ULG1 1556 aaPredicted RBP16.39■□□□□ 0.21
MDH1-203ENST00000409908 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
MDH1-203ENST00000409908 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
MDH1-203ENST00000409908 ABCB7O75027 752 aa16.36■□□□□ 0.21
MDH1-203ENST00000409908 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
MDH1-203ENST00000409908 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
MDH1-203ENST00000409908 MADDQ8WXG6 1647 aa16.35■□□□□ 0.21
MDH1-203ENST00000409908 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
MDH1-203ENST00000409908 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
MDH1-203ENST00000409908 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
MDH1-203ENST00000409908 RRBP1Q9P2E9 1410 aaKnown RBP16.34■□□□□ 0.21
MDH1-203ENST00000409908 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
MDH1-203ENST00000409908 NCOA1Q15788 1441 aa16.33■□□□□ 0.2
MDH1-203ENST00000409908 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
MDH1-203ENST00000409908 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
MDH1-203ENST00000409908 PTPRMP28827 1452 aa16.31■□□□□ 0.2
MDH1-203ENST00000409908 AGLP35573 1532 aa16.3■□□□□ 0.2
MDH1-203ENST00000409908 FBXO31Q5XUX0 539 aaPredicted RBP16.3■□□□□ 0.2
MDH1-203ENST00000409908 CFAP65Q6ZU64 1925 aaKnown RBP16.29■□□□□ 0.2
MDH1-203ENST00000409908 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
MDH1-203ENST00000409908 FER1L4A9Z1Z3 1794 aa16.29■□□□□ 0.2
MDH1-203ENST00000409908 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
MDH1-203ENST00000409908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
MDH1-203ENST00000409908 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
MDH1-203ENST00000409908 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.19
MDH1-203ENST00000409908 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
MDH1-203ENST00000409908 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
MDH1-203ENST00000409908 CLTCQ00610 1675 aaKnown RBP16.26■□□□□ 0.19
MDH1-203ENST00000409908 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
MDH1-203ENST00000409908 HSPA2P54652 639 aa16.24■□□□□ 0.19
MDH1-203ENST00000409908 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
MDH1-203ENST00000409908 ROCK1Q13464 1354 aa16.21■□□□□ 0.19
MDH1-203ENST00000409908 C3P01024 1663 aa16.19■□□□□ 0.18
MDH1-203ENST00000409908 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
MDH1-203ENST00000409908 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
MDH1-203ENST00000409908 KANK1Q14678 1352 aa16.18■□□□□ 0.18
MDH1-203ENST00000409908 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
MDH1-203ENST00000409908 NUP155O75694 1391 aa16.17■□□□□ 0.18
MDH1-203ENST00000409908 NAIPQ13075 1403 aa16.17■□□□□ 0.18
MDH1-203ENST00000409908 CEP152O94986 1710 aa16.16■□□□□ 0.18
MDH1-203ENST00000409908 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
MDH1-203ENST00000409908 MROH1Q8NDA8 1641 aa16.14■□□□□ 0.17
MDH1-203ENST00000409908 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
MDH1-203ENST00000409908 KCNA4P22459 653 aa16.13■□□□□ 0.17
MDH1-203ENST00000409908 SETD1BQ9UPS6 1966 aaKnown RBP16.12■□□□□ 0.17
MDH1-203ENST00000409908 ABCC3O15438 1527 aa16.12■□□□□ 0.17
MDH1-203ENST00000409908 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
MDH1-203ENST00000409908 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
MDH1-203ENST00000409908 CHGAP10645 457 aaKnown RBP16.09■□□□□ 0.17
MDH1-203ENST00000409908 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
MDH1-203ENST00000409908 SETD5Q9C0A6 1442 aa16.09■□□□□ 0.17
MDH1-203ENST00000409908 TRIM26Q12899 539 aaPredicted RBP16.08■□□□□ 0.16
MDH1-203ENST00000409908 TNRQ92752 1358 aa16.08■□□□□ 0.16
MDH1-203ENST00000409908 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
MDH1-203ENST00000409908 MROH2AA6NES4 1674 aa16.08■□□□□ 0.16
MDH1-203ENST00000409908 PKD2Q13563 968 aa16.07■□□□□ 0.16
MDH1-203ENST00000409908 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
MDH1-203ENST00000409908 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
MDH1-203ENST00000409908 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
MDH1-203ENST00000409908 CAMSAP1Q5T5Y3 1602 aa16.06■□□□□ 0.16
MDH1-203ENST00000409908 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
MDH1-203ENST00000409908 IDI1Q13907 227 aa16.06■□□□□ 0.16
MDH1-203ENST00000409908 NPATQ14207 1427 aa16.05■□□□□ 0.16
MDH1-203ENST00000409908 RAB3GAP2Q9H2M9 1393 aa16.05■□□□□ 0.16
MDH1-203ENST00000409908 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
MDH1-203ENST00000409908 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
MDH1-203ENST00000409908 PZPP20742 1482 aa16.04■□□□□ 0.16
MDH1-203ENST00000409908 LMTK3Q96Q04 1460 aa16.04■□□□□ 0.16
MDH1-203ENST00000409908 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
MDH1-203ENST00000409908 VWDEQ8N2E2 1590 aa16.02■□□□□ 0.16
MDH1-203ENST00000409908 UNC13BO14795 1591 aa16.01■□□□□ 0.15
MDH1-203ENST00000409908 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
MDH1-203ENST00000409908 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
MDH1-203ENST00000409908 ERVK-7P63135 1459 aa16.01■□□□□ 0.15
MDH1-203ENST00000409908 ZC3H13Q5T200 1668 aaKnown RBP16.01■□□□□ 0.15
MDH1-203ENST00000409908 PREX1Q8TCU6 1659 aa16.01■□□□□ 0.15
MDH1-203ENST00000409908 FAM135AQ9P2D6 1515 aa16■□□□□ 0.15
MDH1-203ENST00000409908 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
MDH1-203ENST00000409908 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
MDH1-203ENST00000409908 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
MDH1-203ENST00000409908 E9PCH4 1651 aa15.99■□□□□ 0.15
MDH1-203ENST00000409908 LMTK2Q8IWU2 1503 aa15.98■□□□□ 0.15
MDH1-203ENST00000409908 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
MDH1-203ENST00000409908 TET3O43151 1660 aa15.96■□□□□ 0.15
MDH1-203ENST00000409908 EFCAB6Q5THR3 1501 aa15.95■□□□□ 0.14
MDH1-203ENST00000409908 MYO3AQ8NEV4 1616 aa15.95■□□□□ 0.14
MDH1-203ENST00000409908 TXNDC2Q86VQ3 553 aa15.95■□□□□ 0.14
MDH1-203ENST00000409908 SPATA31D1Q6ZQQ2 1576 aa15.95■□□□□ 0.14
MDH1-203ENST00000409908 UGGT1Q9NYU2 1555 aa15.95■□□□□ 0.14
MDH1-203ENST00000409908 LTKP29376 864 aa15.94■□□□□ 0.14
MDH1-203ENST00000409908 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
MDH1-203ENST00000409908 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
MDH1-203ENST00000409908 BCANQ96GW7 911 aa15.94■□□□□ 0.14
MDH1-203ENST00000409908 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms