RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 PPP6R1Q9UPN7 881 aa28■■■□□ 2.07
ITM2C-204ENST00000409704 STRCQ7RTU9 1775 aa28■■■□□ 2.07
ITM2C-204ENST00000409704 ABCC5O15440 1437 aa28■■■□□ 2.07
ITM2C-204ENST00000409704 DAPK1P53355 1430 aa27.99■■■□□ 2.07
ITM2C-204ENST00000409704 PTPRKQ15262 1439 aa27.99■■■□□ 2.07
ITM2C-204ENST00000409704 ZC3H13Q5T200 1668 aaKnown RBP27.98■■■□□ 2.07
ITM2C-204ENST00000409704 KIF3BO15066 747 aa27.98■■■□□ 2.07
ITM2C-204ENST00000409704 DUOX2Q9NRD8 1548 aa27.97■■■□□ 2.07
ITM2C-204ENST00000409704 MROH1Q8NDA8 1641 aa27.96■■■□□ 2.07
ITM2C-204ENST00000409704 CEP170BQ9Y4F5 1589 aaPredicted RBP27.93■■■□□ 2.06
ITM2C-204ENST00000409704 PZPP20742 1482 aa27.92■■■□□ 2.06
ITM2C-204ENST00000409704 KIF15Q9NS87 1388 aa27.91■■■□□ 2.06
ITM2C-204ENST00000409704 ABCC3O15438 1527 aa27.9■■■□□ 2.06
ITM2C-204ENST00000409704 ERBINQ96RT1 1412 aa27.89■■■□□ 2.06
ITM2C-204ENST00000409704 CEP152O94986 1710 aa27.89■■■□□ 2.05
ITM2C-204ENST00000409704 PRDM15P57071 1507 aaPredicted RBP27.88■■■□□ 2.05
ITM2C-204ENST00000409704 CAMSAP1Q5T5Y3 1602 aa27.87■■■□□ 2.05
ITM2C-204ENST00000409704 NCOA1Q15788 1441 aa27.86■■■□□ 2.05
ITM2C-204ENST00000409704 DEPDC5O75140 1603 aa27.86■■■□□ 2.05
ITM2C-204ENST00000409704 ADGRL2O95490 1459 aa27.83■■■□□ 2.05
ITM2C-204ENST00000409704 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
ITM2C-204ENST00000409704 A2ML1A8K2U0 1454 aa27.81■■■□□ 2.04
ITM2C-204ENST00000409704 PLA2R1Q13018 1463 aa27.79■■■□□ 2.04
ITM2C-204ENST00000409704 TNRQ92752 1358 aa27.79■■■□□ 2.04
ITM2C-204ENST00000409704 ANKRD30AQ9BXX3 1397 aa27.79■■■□□ 2.04
ITM2C-204ENST00000409704 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
ITM2C-204ENST00000409704 SPATA31D1Q6ZQQ2 1576 aa27.77■■■□□ 2.04
ITM2C-204ENST00000409704 PTPRTO14522 1441 aa27.77■■■□□ 2.04
ITM2C-204ENST00000409704 RRP7BPQ9NSQ0 103 aa27.77■■■□□ 2.04
ITM2C-204ENST00000409704 FAM50AQ14320 339 aaKnown RBP27.75■■■□□ 2.03
ITM2C-204ENST00000409704 FBXO31Q5XUX0 539 aaPredicted RBP27.74■■■□□ 2.03
ITM2C-204ENST00000409704 ERVK-7P63135 1459 aa27.73■■■□□ 2.03
ITM2C-204ENST00000409704 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
ITM2C-204ENST00000409704 DMRT2Q9Y5R5 561 aa27.73■■■□□ 2.03
ITM2C-204ENST00000409704 NLRP1Q9C000 1473 aa27.72■■■□□ 2.03
ITM2C-204ENST00000409704 POLR1AO95602 1720 aaPredicted RBP27.72■■■□□ 2.03
ITM2C-204ENST00000409704 VWDEQ8N2E2 1590 aa27.71■■■□□ 2.03
ITM2C-204ENST00000409704 LMTK2Q8IWU2 1503 aa27.67■■■□□ 2.02
ITM2C-204ENST00000409704 ARHGAP31Q2M1Z3 1444 aa27.66■■■□□ 2.02
ITM2C-204ENST00000409704 UGGT1Q9NYU2 1555 aa27.65■■■□□ 2.02
ITM2C-204ENST00000409704 NEURL4Q96JN8 1562 aa27.64■■■□□ 2.01
ITM2C-204ENST00000409704 CFAP65Q6ZU64 1925 aaKnown RBP27.63■■■□□ 2.01
ITM2C-204ENST00000409704 KANK1Q14678 1352 aa27.62■■■□□ 2.01
ITM2C-204ENST00000409704 FBXO41Q8TF61 875 aa27.62■■■□□ 2.01
ITM2C-204ENST00000409704 NCKAP5LQ9HCH0 1330 aa27.62■■■□□ 2.01
ITM2C-204ENST00000409704 EFCAB6Q5THR3 1501 aa27.62■■■□□ 2.01
ITM2C-204ENST00000409704 ANKRD50Q9ULJ7 1429 aa27.61■■■□□ 2.01
ITM2C-204ENST00000409704 PPARGC1BQ86YN6 1023 aaKnown RBP27.61■■■□□ 2.01
ITM2C-204ENST00000409704 UNC13BO14795 1591 aa27.6■■■□□ 2.01
ITM2C-204ENST00000409704 LTBP4Q8N2S1 1624 aa27.6■■■□□ 2.01
ITM2C-204ENST00000409704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.01
ITM2C-204ENST00000409704 UBR1Q8IWV7 1749 aa27.59■■■□□ 2.01
ITM2C-204ENST00000409704 PKD2Q13563 968 aa27.59■■■□□ 2.01
ITM2C-204ENST00000409704 CERKQ8TCT0 537 aa27.58■■■□□ 2.01
ITM2C-204ENST00000409704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
ITM2C-204ENST00000409704 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
ITM2C-204ENST00000409704 TET3O43151 1660 aa27.53■■■□□ 2
ITM2C-204ENST00000409704 RRBP1Q9P2E9 1410 aaKnown RBP27.53■■■□□ 2
ITM2C-204ENST00000409704 GCC2Q8IWJ2 1684 aa27.52■■■□□ 2
ITM2C-204ENST00000409704 PIK3C2BO00750 1634 aa27.52■■■□□ 2
ITM2C-204ENST00000409704 SYNMO15061 1565 aa27.52■■■□□ 2
ITM2C-204ENST00000409704 KDM5AP29375 1690 aaKnown RBP27.49■■□□□ 1.99
ITM2C-204ENST00000409704 IQGAP1P46940 1657 aa27.49■■□□□ 1.99
ITM2C-204ENST00000409704 THEMISQ8N1K5 641 aaPredicted RBP27.48■■□□□ 1.99
ITM2C-204ENST00000409704 IQGAP3Q86VI3 1631 aa27.48■■□□□ 1.99
ITM2C-204ENST00000409704 MED14O60244 1454 aa27.47■■□□□ 1.99
ITM2C-204ENST00000409704 IQSEC2Q5JU85 1478 aa27.47■■□□□ 1.99
ITM2C-204ENST00000409704 RPRD2Q5VT52 1461 aaKnown RBP27.46■■□□□ 1.99
ITM2C-204ENST00000409704 NOS1P29475 1434 aa27.45■■□□□ 1.98
ITM2C-204ENST00000409704 ZNF335Q9H4Z2 1342 aaPredicted RBP27.44■■□□□ 1.98
ITM2C-204ENST00000409704 SLIT1O75093 1534 aa27.44■■□□□ 1.98
ITM2C-204ENST00000409704 ITGAEP38570 1179 aa27.43■■□□□ 1.98
ITM2C-204ENST00000409704 ARHGAP23Q9P227 1491 aa27.43■■□□□ 1.98
ITM2C-204ENST00000409704 NPHP4O75161 1426 aaPredicted RBP27.42■■□□□ 1.98
ITM2C-204ENST00000409704 ANKLE2Q86XL3 938 aa27.42■■□□□ 1.98
ITM2C-204ENST00000409704 E9PCH4 1651 aa27.41■■□□□ 1.98
ITM2C-204ENST00000409704 ADGRB3O60242 1522 aa27.41■■□□□ 1.98
ITM2C-204ENST00000409704 SCAF11Q99590 1463 aaKnown RBP27.38■■□□□ 1.97
ITM2C-204ENST00000409704 CPS1P31327 1500 aa27.34■■□□□ 1.97
ITM2C-204ENST00000409704 MYO5BQ9ULV0 1848 aa27.31■■□□□ 1.96
ITM2C-204ENST00000409704 IDI1Q13907 227 aa27.29■■□□□ 1.96
ITM2C-204ENST00000409704 TMEM2Q9UHN6 1383 aa27.29■■□□□ 1.96
ITM2C-204ENST00000409704 STRCP1A6NGW2 1772 aa27.29■■□□□ 1.96
ITM2C-204ENST00000409704 NAIPQ13075 1403 aa27.28■■□□□ 1.96
ITM2C-204ENST00000409704 NUP155O75694 1391 aa27.27■■□□□ 1.96
ITM2C-204ENST00000409704 TMEM131LA2VDJ0 1609 aa27.27■■□□□ 1.96
ITM2C-204ENST00000409704 SLC52A1Q9NWF4 448 aa27.25■■□□□ 1.95
ITM2C-204ENST00000409704 STAG3Q9UJ98 1225 aa27.25■■□□□ 1.95
ITM2C-204ENST00000409704 SPHKAPQ2M3C7 1700 aa27.24■■□□□ 1.95
ITM2C-204ENST00000409704 LTKP29376 864 aa27.24■■□□□ 1.95
ITM2C-204ENST00000409704 HFM1A2PYH4 1435 aa27.23■■□□□ 1.95
ITM2C-204ENST00000409704 TXNDC2Q86VQ3 553 aa27.21■■□□□ 1.95
ITM2C-204ENST00000409704 EID1Q9Y6B2 187 aa27.2■■□□□ 1.94
ITM2C-204ENST00000409704 ZFYVE9O95405 1425 aa27.17■■□□□ 1.94
ITM2C-204ENST00000409704 LRRC7Q96NW7 1537 aa27.14■■□□□ 1.94
ITM2C-204ENST00000409704 RIMS2Q9UQ26 1411 aa27.11■■□□□ 1.93
ITM2C-204ENST00000409704 TRPM2O94759 1503 aa27.1■■□□□ 1.93
ITM2C-204ENST00000409704 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
ITM2C-204ENST00000409704 XIRP1Q702N8 1843 aaKnown RBP27.09■■□□□ 1.93
ITM2C-204ENST00000409704 UBAP1LF5GYI3 381 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms