RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-203ENST00000409606 RSPH4AQ5TD94 716 aa7.64□□□□□ -1.19
R3HDM1-203ENST00000409606 C3P01024 1663 aa7.64□□□□□ -1.19
R3HDM1-203ENST00000409606 MYO3AQ8NEV4 1616 aa7.63□□□□□ -1.19
R3HDM1-203ENST00000409606 NRXN1Q9ULB1 1477 aa7.62□□□□□ -1.19
R3HDM1-203ENST00000409606 SETD5Q9C0A6 1442 aa7.62□□□□□ -1.19
R3HDM1-203ENST00000409606 CLTCL1P53675 1640 aa7.62□□□□□ -1.19
R3HDM1-203ENST00000409606 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
R3HDM1-203ENST00000409606 CDK11AQ9UQ88 783 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-203ENST00000409606 CLSPNQ9HAW4 1339 aa7.61□□□□□ -1.19
R3HDM1-203ENST00000409606 ADGRB3O60242 1522 aa7.61□□□□□ -1.19
R3HDM1-203ENST00000409606 TMEM131LA2VDJ0 1609 aa7.61□□□□□ -1.19
R3HDM1-203ENST00000409606 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
R3HDM1-203ENST00000409606 KIF1BO60333 1816 aa7.61□□□□□ -1.19
R3HDM1-203ENST00000409606 KNDC1Q76NI1 1749 aa7.61□□□□□ -1.19
R3HDM1-203ENST00000409606 UBR1Q8IWV7 1749 aa7.6□□□□□ -1.19
R3HDM1-203ENST00000409606 TRPM1Q7Z4N2 1603 aa7.6□□□□□ -1.19
R3HDM1-203ENST00000409606 UGGT1Q9NYU2 1555 aa7.6□□□□□ -1.19
R3HDM1-203ENST00000409606 MYO5BQ9ULV0 1848 aa7.6□□□□□ -1.19
R3HDM1-203ENST00000409606 IQGAP1P46940 1657 aa7.6□□□□□ -1.19
R3HDM1-203ENST00000409606 P3H3Q8IVL6 736 aa7.6□□□□□ -1.19
R3HDM1-203ENST00000409606 PLA2R1Q13018 1463 aa7.59□□□□□ -1.19
R3HDM1-203ENST00000409606 DHX57Q6P158 1386 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-203ENST00000409606 FAM69CQ0P6D2 419 aa7.59□□□□□ -1.19
R3HDM1-203ENST00000409606 PRAG1Q86YV5 1406 aa7.59□□□□□ -1.19
R3HDM1-203ENST00000409606 A2MP01023 1474 aa7.58□□□□□ -1.2
R3HDM1-203ENST00000409606 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
R3HDM1-203ENST00000409606 RIMS1Q86UR5 1692 aaKnown RBP7.58□□□□□ -1.2
R3HDM1-203ENST00000409606 NRXN3Q9Y4C0 1643 aa7.58□□□□□ -1.2
R3HDM1-203ENST00000409606 NOS1P29475 1434 aa7.57□□□□□ -1.2
R3HDM1-203ENST00000409606 DHX29Q7Z478 1369 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-203ENST00000409606 IQSEC2Q5JU85 1478 aa7.57□□□□□ -1.2
R3HDM1-203ENST00000409606 SCAPERQ9BY12 1400 aa7.56□□□□□ -1.2
R3HDM1-203ENST00000409606 RAB3GAP2Q9H2M9 1393 aa7.56□□□□□ -1.2
R3HDM1-203ENST00000409606 SETBP1Q9Y6X0 1596 aa7.56□□□□□ -1.2
R3HDM1-203ENST00000409606 UHRF1BP1Q6BDS2 1440 aa7.55□□□□□ -1.2
R3HDM1-203ENST00000409606 ANKRD50Q9ULJ7 1429 aa7.54□□□□□ -1.2
R3HDM1-203ENST00000409606 ANKRD30AQ9BXX3 1397 aa7.54□□□□□ -1.2
R3HDM1-203ENST00000409606 MYOM2P54296 1465 aa7.54□□□□□ -1.2
R3HDM1-203ENST00000409606 ZNF644Q9H582 1327 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-203ENST00000409606 SPATA31E1Q6ZUB1 1445 aa7.53□□□□□ -1.2
R3HDM1-203ENST00000409606 LMTK3Q96Q04 1460 aa7.53□□□□□ -1.2
R3HDM1-203ENST00000409606 NEXMIFQ5QGS0 1516 aa7.53□□□□□ -1.2
R3HDM1-203ENST00000409606 YEATS2Q9ULM3 1422 aa7.53□□□□□ -1.2
R3HDM1-203ENST00000409606 ANKRD30BQ9BXX2 1392 aa7.52□□□□□ -1.21
R3HDM1-203ENST00000409606 KIF15Q9NS87 1388 aa7.52□□□□□ -1.21
R3HDM1-203ENST00000409606 SOCS7O14512 581 aa7.51□□□□□ -1.21
R3HDM1-203ENST00000409606 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
R3HDM1-203ENST00000409606 SLIT1O75093 1534 aa7.51□□□□□ -1.21
R3HDM1-203ENST00000409606 USP54Q70EL1 1684 aa7.51□□□□□ -1.21
R3HDM1-203ENST00000409606 CNTLNQ9NXG0 1405 aa7.5□□□□□ -1.21
R3HDM1-203ENST00000409606 ZFYVE9O95405 1425 aa7.49□□□□□ -1.21
R3HDM1-203ENST00000409606 PPP6R1Q9UPN7 881 aa7.49□□□□□ -1.21
R3HDM1-203ENST00000409606 ARHGAP23Q9P227 1491 aa7.49□□□□□ -1.21
R3HDM1-203ENST00000409606 ARHGEF28Q8N1W1 1705 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-203ENST00000409606 DIP2AQ14689 1571 aa7.48□□□□□ -1.21
R3HDM1-203ENST00000409606 NPATQ14207 1427 aa7.48□□□□□ -1.21
R3HDM1-203ENST00000409606 CFDP1Q9UEE9 299 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-203ENST00000409606 XRN1Q8IZH2 1706 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-203ENST00000409606 ERVK-7P63135 1459 aa7.48□□□□□ -1.21
R3HDM1-203ENST00000409606 NWD1Q149M9 1564 aa7.48□□□□□ -1.21
R3HDM1-203ENST00000409606 ADGRB1O14514 1584 aa7.47□□□□□ -1.21
R3HDM1-203ENST00000409606 MYOM1P52179 1685 aa7.47□□□□□ -1.21
R3HDM1-203ENST00000409606 ADGRB2O60241 1585 aa7.46□□□□□ -1.22
R3HDM1-203ENST00000409606 MED14O60244 1454 aa7.46□□□□□ -1.22
R3HDM1-203ENST00000409606 TOPAZ1Q8N9V7 1692 aa7.46□□□□□ -1.22
R3HDM1-203ENST00000409606 ASXL1Q8IXJ9 1541 aa7.45□□□□□ -1.22
R3HDM1-203ENST00000409606 TIMELESSQ9UNS1 1208 aa7.44□□□□□ -1.22
R3HDM1-203ENST00000409606 CHD2O14647 1828 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-203ENST00000409606 RALGAPBQ86X10 1494 aa7.44□□□□□ -1.22
R3HDM1-203ENST00000409606 STRCQ7RTU9 1775 aa7.44□□□□□ -1.22
R3HDM1-203ENST00000409606 GPRASP1Q5JY77 1395 aa7.43□□□□□ -1.22
R3HDM1-203ENST00000409606 XIRP1Q702N8 1843 aaKnown RBP7.43□□□□□ -1.22
R3HDM1-203ENST00000409606 USP32Q8NFA0 1604 aa7.43□□□□□ -1.22
R3HDM1-203ENST00000409606 CPS1P31327 1500 aa7.43□□□□□ -1.22
R3HDM1-203ENST00000409606 APLP2Q06481 763 aa7.42□□□□□ -1.22
R3HDM1-203ENST00000409606 DLC1Q96QB1 1528 aa7.42□□□□□ -1.22
R3HDM1-203ENST00000409606 DMRT2Q9Y5R5 561 aa7.42□□□□□ -1.22
R3HDM1-203ENST00000409606 NLRP1Q9C000 1473 aa7.42□□□□□ -1.22
R3HDM1-203ENST00000409606 CEP170BQ9Y4F5 1589 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-203ENST00000409606 PTPRMP28827 1452 aa7.41□□□□□ -1.22
R3HDM1-203ENST00000409606 HNRNPMP52272 730 aaKnown RBP eCLIP7.41□□□□□ -1.223e-6■■■■□ 21.2
R3HDM1-203ENST00000409606 EHMT2Q96KQ7 1210 aa7.41□□□□□ -1.22
R3HDM1-203ENST00000409606 SPAG9O60271 1321 aaKnown RBP7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 PIK3C2GO75747 1445 aa7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 ANKRD26Q9UPS8 1709 aa7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 STRCP1A6NGW2 1772 aa7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 MARF1Q9Y4F3 1742 aaKnown RBP7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 A2ML1A8K2U0 1454 aa7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 ALKQ9UM73 1620 aa7.39□□□□□ -1.23
R3HDM1-203ENST00000409606 NRKQ7Z2Y5 1582 aa7.38□□□□□ -1.23
R3HDM1-203ENST00000409606 AKAP12Q02952 1782 aa7.38□□□□□ -1.23
R3HDM1-203ENST00000409606 QRICH2Q9H0J4 1663 aa7.38□□□□□ -1.23
R3HDM1-203ENST00000409606 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-203ENST00000409606 AFAP1Q8N556 730 aa7.37□□□□□ -1.23
R3HDM1-203ENST00000409606 SETD1BQ9UPS6 1966 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-203ENST00000409606 TECPR2O15040 1411 aa7.36□□□□□ -1.23
R3HDM1-203ENST00000409606 CERKQ8TCT0 537 aa7.36□□□□□ -1.23
R3HDM1-203ENST00000409606 CRYBG1Q9Y4K1 1723 aa7.36□□□□□ -1.23
R3HDM1-203ENST00000409606 NUP155O75694 1391 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms