RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 OXER1Q8TDS5 423 aa6.19□□□□□ -1.42
GTDC1-206ENST00000409214 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
GTDC1-206ENST00000409214 GOPCQ9HD26 462 aa6.19□□□□□ -1.42
GTDC1-206ENST00000409214 ZBTB47Q9UFB7 747 aaPredicted RBP6.19□□□□□ -1.42
GTDC1-206ENST00000409214 MYO15BQ96JP2 1530 aa6.19□□□□□ -1.42
GTDC1-206ENST00000409214 TTLL12Q14166 644 aaPredicted RBP6.18□□□□□ -1.42
GTDC1-206ENST00000409214 GLMNQ92990 594 aa6.18□□□□□ -1.42
GTDC1-206ENST00000409214 CALR3Q96L12 384 aaKnown RBP6.18□□□□□ -1.42
GTDC1-206ENST00000409214 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
GTDC1-206ENST00000409214 SGIP1Q9BQI5 828 aa6.18□□□□□ -1.42
GTDC1-206ENST00000409214 GDPD2Q9HCC8 539 aa6.18□□□□□ -1.42
GTDC1-206ENST00000409214 AMHR2Q16671 573 aa6.18□□□□□ -1.42
GTDC1-206ENST00000409214 RIPOR2Q9Y4F9 1068 aa6.17□□□□□ -1.42
GTDC1-206ENST00000409214 ANKRD13AQ8IZ07 590 aa6.17□□□□□ -1.42
GTDC1-206ENST00000409214 DRC1Q96MC2 740 aa6.17□□□□□ -1.42
GTDC1-206ENST00000409214 GIGYF2Q6Y7W6 1299 aaKnown RBP6.16□□□□□ -1.42
GTDC1-206ENST00000409214 RAB11FIP3O75154 756 aa6.16□□□□□ -1.42
GTDC1-206ENST00000409214 PPP1R15AO75807 674 aaPredicted RBP6.16□□□□□ -1.42
GTDC1-206ENST00000409214 TCF3P15923 654 aa6.16□□□□□ -1.42
GTDC1-206ENST00000409214 ZNF16P17020 682 aaPredicted RBP6.16□□□□□ -1.42
GTDC1-206ENST00000409214 HIRIP3Q9BW71 556 aaPredicted RBP6.16□□□□□ -1.42
GTDC1-206ENST00000409214 ACIN1Q9UKV3 1341 aaKnown RBP6.16□□□□□ -1.42
GTDC1-206ENST00000409214 ZC3H4Q9UPT8 1303 aaKnown RBP6.16□□□□□ -1.42
GTDC1-206ENST00000409214 RASEFQ8IZ41 740 aa6.15□□□□□ -1.42
GTDC1-206ENST00000409214 MICAL1Q8TDZ2 1067 aa6.15□□□□□ -1.42
GTDC1-206ENST00000409214 ADAMTS19Q8TE59 1207 aa6.15□□□□□ -1.42
GTDC1-206ENST00000409214 AKT1S1Q96B36 256 aa6.15□□□□□ -1.42
GTDC1-206ENST00000409214 PKNOX2Q96KN3 472 aa6.15□□□□□ -1.42
GTDC1-206ENST00000409214 TAGLNQ01995 201 aaKnown RBP6.15□□□□□ -1.42
GTDC1-206ENST00000409214 VTI1AQ96AJ9 217 aa6.15□□□□□ -1.42
GTDC1-206ENST00000409214 IRF6O14896 467 aa6.15□□□□□ -1.43
GTDC1-206ENST00000409214 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.43
GTDC1-206ENST00000409214 GPATCH3Q96I76 525 aa6.15□□□□□ -1.43
GTDC1-206ENST00000409214 PPME1Q9Y570 386 aa6.15□□□□□ -1.43
GTDC1-206ENST00000409214 POLR3EQ9NVU0 708 aa6.14□□□□□ -1.43
GTDC1-206ENST00000409214 SRPK2P78362 688 aaKnown RBP6.14□□□□□ -1.43
GTDC1-206ENST00000409214 DNAJC14Q6Y2X3 702 aaPredicted RBP6.14□□□□□ -1.43
GTDC1-206ENST00000409214 SSUH2Q9Y2M2 353 aa6.14□□□□□ -1.43
GTDC1-206ENST00000409214 SUGT1Q9Y2Z0 365 aa6.14□□□□□ -1.43
GTDC1-206ENST00000409214 TBC1D12O60347 775 aa6.13□□□□□ -1.43
GTDC1-206ENST00000409214 PBXIP1Q96AQ6 731 aa6.13□□□□□ -1.43
GTDC1-206ENST00000409214 CFAP70Q5T0N1 1121 aa6.12□□□□□ -1.43
GTDC1-206ENST00000409214 CDCA8Q53HL2 280 aa6.12□□□□□ -1.43
GTDC1-206ENST00000409214 RBM27Q9P2N5 1060 aaKnown RBP6.12□□□□□ -1.43
GTDC1-206ENST00000409214 TMEM88BA6NKF7 163 aa6.12□□□□□ -1.43
GTDC1-206ENST00000409214 TEX2Q8IWB9 1127 aa6.12□□□□□ -1.43
GTDC1-206ENST00000409214 KLHL42Q9P2K6 505 aa6.12□□□□□ -1.43
GTDC1-206ENST00000409214 MAP2K5Q13163 448 aa6.11□□□□□ -1.43
GTDC1-206ENST00000409214 ATP1B4Q9UN42 357 aaPredicted RBP6.11□□□□□ -1.43
GTDC1-206ENST00000409214 EVI5LQ96CN4 794 aa6.1□□□□□ -1.43
GTDC1-206ENST00000409214 MINK1Q8N4C8 1332 aaPredicted RBP6.1□□□□□ -1.43
GTDC1-206ENST00000409214 GIPC2Q8TF65 315 aa6.1□□□□□ -1.43
GTDC1-206ENST00000409214 SGSM3Q96HU1 749 aa6.1□□□□□ -1.43
GTDC1-206ENST00000409214 CDCA7Q9BWT1 371 aaPredicted RBP6.1□□□□□ -1.43
GTDC1-206ENST00000409214 PEX14O75381 377 aa6.09□□□□□ -1.43
GTDC1-206ENST00000409214 SH3D19Q5HYK7 790 aa6.09□□□□□ -1.43
GTDC1-206ENST00000409214 PIP4P2Q8N4L2 257 aa6.09□□□□□ -1.43
GTDC1-206ENST00000409214 ABL2P42684 1182 aa6.09□□□□□ -1.43
GTDC1-206ENST00000409214 FOXD4L6Q3SYB3 417 aaPredicted RBP6.09□□□□□ -1.43
GTDC1-206ENST00000409214 FOXD4L3Q6VB84 417 aaPredicted RBP6.09□□□□□ -1.43
GTDC1-206ENST00000409214 MTMR14Q8NCE2 650 aa6.09□□□□□ -1.43
GTDC1-206ENST00000409214 FAM50AQ14320 339 aaKnown RBP6.09□□□□□ -1.44
GTDC1-206ENST00000409214 ZNF467Q7Z7K2 595 aaPredicted RBP6.09□□□□□ -1.44
GTDC1-206ENST00000409214 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.44
GTDC1-206ENST00000409214 FAM212AQ96EL1 285 aa6.09□□□□□ -1.44
GTDC1-206ENST00000409214 ZBTB12Q9Y330 459 aaPredicted RBP6.09□□□□□ -1.44
GTDC1-206ENST00000409214 HAX1O00165 279 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 DPYSL4O14531 572 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 CENPBP07199 599 aaPredicted RBP6.08□□□□□ -1.44
GTDC1-206ENST00000409214 CSB-PGBD3P0DP91 1061 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 NAALADL2Q58DX5 795 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 DPH6Q7L8W6 267 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 DNAJC2Q99543 621 aaKnown RBP6.08□□□□□ -1.44
GTDC1-206ENST00000409214 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.08□□□□□ -1.44
GTDC1-206ENST00000409214 USTQ9Y2C2 406 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 TBC1D2BQ9UPU7 963 aa6.08□□□□□ -1.44
GTDC1-206ENST00000409214 SPDYE2BA6NHP3 402 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 SPDYE5A6NIY4 337 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 PATL2C9JE40 543 aaKnown RBP6.07□□□□□ -1.44
GTDC1-206ENST00000409214 TPD52L2O43399 206 aaKnown RBP6.07□□□□□ -1.44
GTDC1-206ENST00000409214 MAP4K4O95819 1239 aaPredicted RBP6.07□□□□□ -1.44
GTDC1-206ENST00000409214 SPDYE6P0CI01 402 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 CHRM1P11229 460 aaPredicted RBP6.07□□□□□ -1.44
GTDC1-206ENST00000409214 SPDYE2Q495Y8 402 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 FBXO22Q8NEZ5 403 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 DDX27Q96GQ7 796 aaKnown RBP6.07□□□□□ -1.44
GTDC1-206ENST00000409214 BCL2L13Q9BXK5 485 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 VRTNQ9H8Y1 702 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 SCNN1AP37088 669 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 CAMK2BQ13554 666 aa6.07□□□□□ -1.44
GTDC1-206ENST00000409214 REM2Q8IYK8 340 aaPredicted RBP6.06□□□□□ -1.44
GTDC1-206ENST00000409214 ZEB1P37275 1124 aaPredicted RBP6.06□□□□□ -1.44
GTDC1-206ENST00000409214 MFSD10Q14728 455 aa6.06□□□□□ -1.44
GTDC1-206ENST00000409214 C9orf131Q5VYM1 1079 aa6.06□□□□□ -1.44
GTDC1-206ENST00000409214 RBM46Q8TBY0 533 aaKnown RBP6.06□□□□□ -1.44
GTDC1-206ENST00000409214 NUTM2FA1L443 756 aa6.06□□□□□ -1.44
GTDC1-206ENST00000409214 PLEKHD1A6NEE1 506 aa6.06□□□□□ -1.44
GTDC1-206ENST00000409214 UBXN4Q92575 508 aa6.06□□□□□ -1.44
GTDC1-206ENST00000409214 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.06□□□□□ -1.44
GTDC1-206ENST00000409214 PHF8Q9UPP1 1060 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms