RNA–Protein interactions for RNA: ENST00000406936.7

COMMD6-205, Transcript of COMM domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD6, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-205ENST00000406936 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
COMMD6-205ENST00000406936 CLTCQ00610 1675 aaKnown RBP13.94□□□□□ -0.18
COMMD6-205ENST00000406936 ZNF335Q9H4Z2 1342 aaPredicted RBP13.94□□□□□ -0.18
COMMD6-205ENST00000406936 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
COMMD6-205ENST00000406936 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
COMMD6-205ENST00000406936 ESF1Q9H501 851 aaKnown RBP13.92□□□□□ -0.18
COMMD6-205ENST00000406936 PLA2R1Q13018 1463 aa13.92□□□□□ -0.18
COMMD6-205ENST00000406936 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
COMMD6-205ENST00000406936 NCKAP5LQ9HCH0 1330 aa13.91□□□□□ -0.18
COMMD6-205ENST00000406936 CEP170BQ9Y4F5 1589 aaPredicted RBP13.91□□□□□ -0.18
COMMD6-205ENST00000406936 MED1Q15648 1581 aaPredicted RBP13.9□□□□□ -0.18
COMMD6-205ENST00000406936 ZMYM3Q14202 1370 aa13.9□□□□□ -0.18
COMMD6-205ENST00000406936 UBAP1LF5GYI3 381 aa13.9□□□□□ -0.18
COMMD6-205ENST00000406936 PLXNC1O60486 1568 aa13.9□□□□□ -0.18
COMMD6-205ENST00000406936 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
COMMD6-205ENST00000406936 INO80Q9ULG1 1556 aaPredicted RBP13.87□□□□□ -0.19
COMMD6-205ENST00000406936 SYCP2Q9BX26 1530 aa13.87□□□□□ -0.19
COMMD6-205ENST00000406936 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
COMMD6-205ENST00000406936 PKD2Q13563 968 aa13.86□□□□□ -0.19
COMMD6-205ENST00000406936 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
COMMD6-205ENST00000406936 CCDC18Q5T9S5 1454 aa13.85□□□□□ -0.19
COMMD6-205ENST00000406936 DNMT1P26358 1616 aaKnown RBP13.84□□□□□ -0.19
COMMD6-205ENST00000406936 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.19
COMMD6-205ENST00000406936 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
COMMD6-205ENST00000406936 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
COMMD6-205ENST00000406936 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
COMMD6-205ENST00000406936 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
COMMD6-205ENST00000406936 HSPA1LP34931 641 aa13.82□□□□□ -0.2
COMMD6-205ENST00000406936 A2MP01023 1474 aa13.82□□□□□ -0.2
COMMD6-205ENST00000406936 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
COMMD6-205ENST00000406936 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
COMMD6-205ENST00000406936 ALKQ9UM73 1620 aa13.81□□□□□ -0.2
COMMD6-205ENST00000406936 SPAG9O60271 1321 aaKnown RBP13.8□□□□□ -0.2
COMMD6-205ENST00000406936 CPS1P31327 1500 aa13.8□□□□□ -0.2
COMMD6-205ENST00000406936 EVX2Q03828 476 aa13.79□□□□□ -0.2
COMMD6-205ENST00000406936 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.2
COMMD6-205ENST00000406936 VWDEQ8N2E2 1590 aa13.77□□□□□ -0.21
COMMD6-205ENST00000406936 HNRNPMP52272 730 aaKnown RBP eCLIP13.77□□□□□ -0.21
COMMD6-205ENST00000406936 SHANK2Q9UPX8 1470 aa13.77□□□□□ -0.21
COMMD6-205ENST00000406936 ZNF777Q9ULD5 760 aaPredicted RBP13.76□□□□□ -0.21
COMMD6-205ENST00000406936 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
COMMD6-205ENST00000406936 PLEKHH2Q8IVE3 1493 aa13.75□□□□□ -0.21
COMMD6-205ENST00000406936 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
COMMD6-205ENST00000406936 STRCP1A6NGW2 1772 aa13.75□□□□□ -0.21
COMMD6-205ENST00000406936 GGT6Q6P531 493 aa13.74□□□□□ -0.21
COMMD6-205ENST00000406936 TOM1O60784 492 aa13.72□□□□□ -0.21
COMMD6-205ENST00000406936 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
COMMD6-205ENST00000406936 PZPP20742 1482 aa13.7□□□□□ -0.22
COMMD6-205ENST00000406936 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
COMMD6-205ENST00000406936 MED14O60244 1454 aa13.69□□□□□ -0.22
COMMD6-205ENST00000406936 TNRQ92752 1358 aa13.69□□□□□ -0.22
COMMD6-205ENST00000406936 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
COMMD6-205ENST00000406936 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
COMMD6-205ENST00000406936 MBD5Q9P267 1494 aa13.69□□□□□ -0.22
COMMD6-205ENST00000406936 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
COMMD6-205ENST00000406936 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
COMMD6-205ENST00000406936 FBXO31Q5XUX0 539 aaPredicted RBP13.68□□□□□ -0.22
COMMD6-205ENST00000406936 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
COMMD6-205ENST00000406936 CCNB3Q8WWL7 1395 aa13.67□□□□□ -0.22
COMMD6-205ENST00000406936 RTEL1-TNFRSF6BF6WH68 1400 aa13.67□□□□□ -0.22
COMMD6-205ENST00000406936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.22
COMMD6-205ENST00000406936 SYNMO15061 1565 aa13.66□□□□□ -0.22
COMMD6-205ENST00000406936 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
COMMD6-205ENST00000406936 NPHP4O75161 1426 aaPredicted RBP13.65□□□□□ -0.22
COMMD6-205ENST00000406936 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
COMMD6-205ENST00000406936 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
COMMD6-205ENST00000406936 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
COMMD6-205ENST00000406936 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
COMMD6-205ENST00000406936 ZC3H13Q5T200 1668 aaKnown RBP13.65□□□□□ -0.22
COMMD6-205ENST00000406936 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
COMMD6-205ENST00000406936 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-205ENST00000406936 ZBTB22O15209 634 aa13.64□□□□□ -0.23
COMMD6-205ENST00000406936 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
COMMD6-205ENST00000406936 MIA2Q96PC5 1412 aa13.63□□□□□ -0.23
COMMD6-205ENST00000406936 GABBR2O75899 941 aa13.61□□□□□ -0.23
COMMD6-205ENST00000406936 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-205ENST00000406936 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
COMMD6-205ENST00000406936 KIF3BO15066 747 aa13.6□□□□□ -0.23
COMMD6-205ENST00000406936 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
COMMD6-205ENST00000406936 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
COMMD6-205ENST00000406936 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
COMMD6-205ENST00000406936 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
COMMD6-205ENST00000406936 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
COMMD6-205ENST00000406936 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
COMMD6-205ENST00000406936 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.23
COMMD6-205ENST00000406936 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
COMMD6-205ENST00000406936 ABCC3O15438 1527 aa13.56□□□□□ -0.24
COMMD6-205ENST00000406936 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
COMMD6-205ENST00000406936 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
COMMD6-205ENST00000406936 CEP152O94986 1710 aa13.55□□□□□ -0.24
COMMD6-205ENST00000406936 MROH1Q8NDA8 1641 aa13.54□□□□□ -0.24
COMMD6-205ENST00000406936 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
COMMD6-205ENST00000406936 ERVK-7P63135 1459 aa13.54□□□□□ -0.24
COMMD6-205ENST00000406936 NCOA2Q15596 1464 aa13.52□□□□□ -0.24
COMMD6-205ENST00000406936 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.25
COMMD6-205ENST00000406936 SETD1AO15047 1707 aaKnown RBP13.52□□□□□ -0.25
COMMD6-205ENST00000406936 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
COMMD6-205ENST00000406936 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
COMMD6-205ENST00000406936 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
COMMD6-205ENST00000406936 SLIT1O75093 1534 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms