RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
LSP1-204ENST00000406638 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
LSP1-204ENST00000406638 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
LSP1-204ENST00000406638 SPAG9O60271 1321 aaKnown RBP22.17■■□□□ 1.14
LSP1-204ENST00000406638 SCAPERQ9BY12 1400 aa22.16■■□□□ 1.14
LSP1-204ENST00000406638 SALL2Q9Y467 1007 aaPredicted RBP22.15■■□□□ 1.14
LSP1-204ENST00000406638 ADGRL1O94910 1474 aa22.14■■□□□ 1.13
LSP1-204ENST00000406638 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
LSP1-204ENST00000406638 MAST1Q9Y2H9 1570 aa22.13■■□□□ 1.13
LSP1-204ENST00000406638 CCDC184Q52MB2 194 aa22.12■■□□□ 1.13
LSP1-204ENST00000406638 RPRD2Q5VT52 1461 aaKnown RBP22.11■■□□□ 1.13
LSP1-204ENST00000406638 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
LSP1-204ENST00000406638 ARAP3Q8WWN8 1544 aa22.1■■□□□ 1.13
LSP1-204ENST00000406638 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
LSP1-204ENST00000406638 PLXNC1O60486 1568 aa22.07■■□□□ 1.12
LSP1-204ENST00000406638 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
LSP1-204ENST00000406638 ZFYVE16Q7Z3T8 1539 aa22.06■■□□□ 1.12
LSP1-204ENST00000406638 TEX14Q8IWB6 1497 aa22.06■■□□□ 1.12
LSP1-204ENST00000406638 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
LSP1-204ENST00000406638 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
LSP1-204ENST00000406638 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
LSP1-204ENST00000406638 IL27Q8NEV9 243 aa22.04■■□□□ 1.12
LSP1-204ENST00000406638 DUOX2Q9NRD8 1548 aa22.04■■□□□ 1.12
LSP1-204ENST00000406638 KDM5DQ9BY66 1539 aa22.03■■□□□ 1.12
LSP1-204ENST00000406638 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
LSP1-204ENST00000406638 RTN4Q9NQC3 1192 aaKnown RBP22.03■■□□□ 1.12
LSP1-204ENST00000406638 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
LSP1-204ENST00000406638 ATP7AQ04656 1500 aa22■■□□□ 1.11
LSP1-204ENST00000406638 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
LSP1-204ENST00000406638 KIF3BO15066 747 aa21.99■■□□□ 1.11
LSP1-204ENST00000406638 IPO9Q96P70 1041 aaKnown RBP21.99■■□□□ 1.11
LSP1-204ENST00000406638 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
LSP1-204ENST00000406638 ANP32AP39687 249 aaKnown RBP21.98■■□□□ 1.11
LSP1-204ENST00000406638 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
LSP1-204ENST00000406638 RTEL1-TNFRSF6BF6WH68 1400 aa21.98■■□□□ 1.11
LSP1-204ENST00000406638 UNC13BO14795 1591 aa21.97■■□□□ 1.11
LSP1-204ENST00000406638 PLA2R1Q13018 1463 aa21.97■■□□□ 1.11
LSP1-204ENST00000406638 ZBTB47Q9UFB7 747 aaPredicted RBP21.97■■□□□ 1.11
LSP1-204ENST00000406638 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
LSP1-204ENST00000406638 HSPA5P11021 654 aaKnown RBP21.95■■□□□ 1.11
LSP1-204ENST00000406638 RGL3Q3MIN7 710 aa21.95■■□□□ 1.11
LSP1-204ENST00000406638 MRS2Q9HD23 443 aa21.93■■□□□ 1.1
LSP1-204ENST00000406638 POGZQ7Z3K3 1410 aa21.92■■□□□ 1.1
LSP1-204ENST00000406638 KIDINS220Q9ULH0 1771 aa21.92■■□□□ 1.1
LSP1-204ENST00000406638 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
LSP1-204ENST00000406638 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
LSP1-204ENST00000406638 DCAF11Q8TEB1 546 aa21.9■■□□□ 1.1
LSP1-204ENST00000406638 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
LSP1-204ENST00000406638 IQGAP3Q86VI3 1631 aa21.89■■□□□ 1.1
LSP1-204ENST00000406638 DHX29Q7Z478 1369 aaKnown RBP21.89■■□□□ 1.1
LSP1-204ENST00000406638 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.89■■□□□ 1.09
LSP1-204ENST00000406638 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
LSP1-204ENST00000406638 C11orf95C9JLR9 678 aaPredicted RBP21.87■■□□□ 1.09
LSP1-204ENST00000406638 CCDC144AA2RUR9 1427 aa21.86■■□□□ 1.09
LSP1-204ENST00000406638 GGT6Q6P531 493 aa21.85■■□□□ 1.09
LSP1-204ENST00000406638 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
LSP1-204ENST00000406638 EIF4G2P78344 907 aaKnown RBP eCLIP21.84■■□□□ 1.09
LSP1-204ENST00000406638 TSPOAP1O95153 1857 aa21.84■■□□□ 1.09
LSP1-204ENST00000406638 DIP2BQ9P265 1576 aa21.83■■□□□ 1.09
LSP1-204ENST00000406638 KDM5CP41229 1560 aa21.83■■□□□ 1.08
LSP1-204ENST00000406638 A2MP01023 1474 aa21.82■■□□□ 1.08
LSP1-204ENST00000406638 NEO1Q92859 1461 aa21.82■■□□□ 1.08
LSP1-204ENST00000406638 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
LSP1-204ENST00000406638 FRMPD1Q5SYB0 1578 aa21.81■■□□□ 1.08
LSP1-204ENST00000406638 SENP3-EIF4A1A0A087X0R7 540 aa21.81■■□□□ 1.08
LSP1-204ENST00000406638 CNTLNQ9NXG0 1405 aa21.81■■□□□ 1.08
LSP1-204ENST00000406638 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
LSP1-204ENST00000406638 MROH1Q8NDA8 1641 aa21.8■■□□□ 1.08
LSP1-204ENST00000406638 E9PCH4 1651 aa21.79■■□□□ 1.08
LSP1-204ENST00000406638 CFAP74Q9C0B2 1584 aa21.79■■□□□ 1.08
LSP1-204ENST00000406638 ABCA6Q8N139 1617 aa21.79■■□□□ 1.08
LSP1-204ENST00000406638 CNGB1Q14028 1251 aaPredicted RBP21.78■■□□□ 1.08
LSP1-204ENST00000406638 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
LSP1-204ENST00000406638 MLH3Q9UHC1 1453 aa21.78■■□□□ 1.08
LSP1-204ENST00000406638 HECW2Q9P2P5 1572 aa21.78■■□□□ 1.08
LSP1-204ENST00000406638 ATP10AO60312 1499 aa21.77■■□□□ 1.08
LSP1-204ENST00000406638 DEPDC5O75140 1603 aa21.77■■□□□ 1.08
LSP1-204ENST00000406638 GLI2P10070 1586 aa21.76■■□□□ 1.07
LSP1-204ENST00000406638 NEFMP07197 916 aa21.75■■□□□ 1.07
LSP1-204ENST00000406638 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
LSP1-204ENST00000406638 KANK1Q14678 1352 aa21.74■■□□□ 1.07
LSP1-204ENST00000406638 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
LSP1-204ENST00000406638 VWDEQ8N2E2 1590 aa21.73■■□□□ 1.07
LSP1-204ENST00000406638 SPATA31E1Q6ZUB1 1445 aa21.73■■□□□ 1.07
LSP1-204ENST00000406638 PRDM15P57071 1507 aaPredicted RBP21.72■■□□□ 1.07
LSP1-204ENST00000406638 RICTORQ6R327 1708 aa21.72■■□□□ 1.07
LSP1-204ENST00000406638 PPRC1Q5VV67 1664 aaKnown RBP21.71■■□□□ 1.07
LSP1-204ENST00000406638 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
LSP1-204ENST00000406638 USP47Q96K76 1375 aa21.7■■□□□ 1.07
LSP1-204ENST00000406638 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
LSP1-204ENST00000406638 CCDC7Q96M83 1385 aa21.7■■□□□ 1.06
LSP1-204ENST00000406638 DIP2CQ9Y2E4 1556 aa21.7■■□□□ 1.06
LSP1-204ENST00000406638 COL17A1Q9UMD9 1497 aaPredicted RBP21.69■■□□□ 1.06
LSP1-204ENST00000406638 POLR3GLQ9BT43 218 aa21.69■■□□□ 1.06
LSP1-204ENST00000406638 NUDCQ9Y266 331 aa21.69■■□□□ 1.06
LSP1-204ENST00000406638 SMG6Q86US8 1419 aaKnown RBP21.69■■□□□ 1.06
LSP1-204ENST00000406638 EIF2AK4Q9P2K8 1649 aaKnown RBP21.68■■□□□ 1.06
LSP1-204ENST00000406638 CEP152O94986 1710 aa21.67■■□□□ 1.06
LSP1-204ENST00000406638 TET3O43151 1660 aa21.67■■□□□ 1.06
LSP1-204ENST00000406638 PTPRTO14522 1441 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms