RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 HSPA5P11021 654 aaKnown RBP14.93□□□□□ -0.02
SMCR8-201ENST00000406438 H3BQV1 296 aa14.93□□□□□ -0.02
SMCR8-201ENST00000406438 TPM2P07951 284 aa14.93□□□□□ -0.02
SMCR8-201ENST00000406438 IFFO2Q5TF58 517 aa14.93□□□□□ -0.02
SMCR8-201ENST00000406438 AMPHP49418 695 aa14.93□□□□□ -0.02
SMCR8-201ENST00000406438 RBM19Q9Y4C8 960 aaKnown RBP14.92□□□□□ -0.02
SMCR8-201ENST00000406438 CHMP4CQ96CF2 233 aa14.92□□□□□ -0.02
SMCR8-201ENST00000406438 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
SMCR8-201ENST00000406438 SETQ01105 290 aaPredicted RBP14.92□□□□□ -0.02
SMCR8-201ENST00000406438 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
SMCR8-201ENST00000406438 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
SMCR8-201ENST00000406438 NUP155O75694 1391 aa14.9□□□□□ -0.02
SMCR8-201ENST00000406438 ANKRD30AQ9BXX3 1397 aa14.9□□□□□ -0.02
SMCR8-201ENST00000406438 AKAP17AQ02040 695 aaKnown RBP14.9□□□□□ -0.02
SMCR8-201ENST00000406438 FMN1Q68DA7 1419 aa14.9□□□□□ -0.02
SMCR8-201ENST00000406438 TPM1P09493 284 aa14.9□□□□□ -0.02
SMCR8-201ENST00000406438 CCDC70Q6NSX1 233 aa14.9□□□□□ -0.02
SMCR8-201ENST00000406438 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
SMCR8-201ENST00000406438 FOXD1Q16676 465 aa14.89□□□□□ -0.03
SMCR8-201ENST00000406438 SMARCA2P51531 1590 aa14.89□□□□□ -0.03
SMCR8-201ENST00000406438 GOLGA6L19H0YKK7 550 aa14.89□□□□□ -0.03
SMCR8-201ENST00000406438 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
SMCR8-201ENST00000406438 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
SMCR8-201ENST00000406438 AMOTL1Q8IY63 956 aa14.87□□□□□ -0.03
SMCR8-201ENST00000406438 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
SMCR8-201ENST00000406438 TRIM34Q9BYJ4 488 aa14.87□□□□□ -0.03
SMCR8-201ENST00000406438 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
SMCR8-201ENST00000406438 ATP6V1DQ9Y5K8 247 aa14.87□□□□□ -0.03
SMCR8-201ENST00000406438 DDX11L8A8MPP1 907 aa14.86□□□□□ -0.03
SMCR8-201ENST00000406438 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
SMCR8-201ENST00000406438 CCDC18Q5T9S5 1454 aa14.86□□□□□ -0.03
SMCR8-201ENST00000406438 NOL10Q9BSC4 688 aaKnown RBP14.85□□□□□ -0.03
SMCR8-201ENST00000406438 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
SMCR8-201ENST00000406438 MPHOSPH9Q99550 1183 aa14.85□□□□□ -0.03
SMCR8-201ENST00000406438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMCR8-201ENST00000406438 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
SMCR8-201ENST00000406438 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
SMCR8-201ENST00000406438 SYNE3Q6ZMZ3 975 aa14.84□□□□□ -0.03
SMCR8-201ENST00000406438 CTDP1Q9Y5B0 961 aaPredicted RBP14.84□□□□□ -0.03
SMCR8-201ENST00000406438 EVA1CP58658 441 aa14.83□□□□□ -0.03
SMCR8-201ENST00000406438 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.03
SMCR8-201ENST00000406438 CCDC146Q8IYE0 955 aa14.83□□□□□ -0.04
SMCR8-201ENST00000406438 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.04
SMCR8-201ENST00000406438 RILPL2Q969X0 211 aa14.83□□□□□ -0.04
SMCR8-201ENST00000406438 UACAQ9BZF9 1416 aa14.83□□□□□ -0.04
SMCR8-201ENST00000406438 GPS2Q13227 327 aa14.82□□□□□ -0.04
SMCR8-201ENST00000406438 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
SMCR8-201ENST00000406438 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.82□□□□□ -0.04
SMCR8-201ENST00000406438 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
SMCR8-201ENST00000406438 IPO9Q96P70 1041 aaKnown RBP14.81□□□□□ -0.04
SMCR8-201ENST00000406438 CCAR2Q8N163 923 aaKnown RBP14.81□□□□□ -0.04
SMCR8-201ENST00000406438 HOOK1Q9UJC3 728 aaKnown RBP14.8□□□□□ -0.04
SMCR8-201ENST00000406438 BECN2A8MW95 431 aa14.8□□□□□ -0.04
SMCR8-201ENST00000406438 KIF15Q9NS87 1388 aa14.8□□□□□ -0.04
SMCR8-201ENST00000406438 FOXD4L5Q5VV16 416 aaPredicted RBP14.8□□□□□ -0.04
SMCR8-201ENST00000406438 FOXD4L4Q8WXT5 416 aaPredicted RBP14.8□□□□□ -0.04
SMCR8-201ENST00000406438 CLUAP1Q96AJ1 413 aa14.8□□□□□ -0.04
SMCR8-201ENST00000406438 WWC1Q8IX03 1113 aa14.8□□□□□ -0.04
SMCR8-201ENST00000406438 RAB3GAP2Q9H2M9 1393 aa14.8□□□□□ -0.04
SMCR8-201ENST00000406438 TRIM29Q14134 588 aa14.79□□□□□ -0.04
SMCR8-201ENST00000406438 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
SMCR8-201ENST00000406438 WIZO95785 1651 aa14.79□□□□□ -0.04
SMCR8-201ENST00000406438 KIF3BO15066 747 aa14.79□□□□□ -0.04
SMCR8-201ENST00000406438 ANKRD20A12PQ8NF67 263 aa14.79□□□□□ -0.04
SMCR8-201ENST00000406438 MCTP1Q6DN14 999 aa14.78□□□□□ -0.04
SMCR8-201ENST00000406438 CPLX2Q6PUV4 134 aaKnown RBP14.78□□□□□ -0.04
SMCR8-201ENST00000406438 IPO7O95373 1038 aaKnown RBP14.78□□□□□ -0.04
SMCR8-201ENST00000406438 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
SMCR8-201ENST00000406438 NLRP13Q86W25 1043 aa14.78□□□□□ -0.04
SMCR8-201ENST00000406438 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
SMCR8-201ENST00000406438 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
SMCR8-201ENST00000406438 RAD21O60216 631 aa14.77□□□□□ -0.04
SMCR8-201ENST00000406438 FBXO3Q9UK99 471 aa14.77□□□□□ -0.05
SMCR8-201ENST00000406438 PCMTD1Q96MG8 357 aaPredicted RBP14.77□□□□□ -0.05
SMCR8-201ENST00000406438 MSH5O43196 834 aa14.77□□□□□ -0.05
SMCR8-201ENST00000406438 SKOR2Q2VWA4 1001 aaPredicted RBP14.76□□□□□ -0.05
SMCR8-201ENST00000406438 ANKRD45Q5TZF3 282 aa14.76□□□□□ -0.05
SMCR8-201ENST00000406438 CCDC47Q96A33 483 aaKnown RBP14.76□□□□□ -0.05
SMCR8-201ENST00000406438 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
SMCR8-201ENST00000406438 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
SMCR8-201ENST00000406438 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
SMCR8-201ENST00000406438 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
SMCR8-201ENST00000406438 SOGA1O94964 1423 aa14.75□□□□□ -0.05
SMCR8-201ENST00000406438 CGNL1Q0VF96 1302 aa14.75□□□□□ -0.05
SMCR8-201ENST00000406438 CWC22Q9HCG8 908 aaKnown RBP14.75□□□□□ -0.05
SMCR8-201ENST00000406438 TTC5Q8N0Z6 440 aa14.74□□□□□ -0.05
SMCR8-201ENST00000406438 CENPQQ7L2Z9 268 aaPredicted RBP14.74□□□□□ -0.05
SMCR8-201ENST00000406438 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
SMCR8-201ENST00000406438 NUTM2FA1L443 756 aa14.73□□□□□ -0.05
SMCR8-201ENST00000406438 CCDC43Q96MW1 224 aaKnown RBP14.73□□□□□ -0.05
SMCR8-201ENST00000406438 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
SMCR8-201ENST00000406438 APPP05067 770 aa14.73□□□□□ -0.05
SMCR8-201ENST00000406438 NUTM2DQ5VT03 806 aaPredicted RBP14.73□□□□□ -0.05
SMCR8-201ENST00000406438 COG3Q96JB2 828 aa14.73□□□□□ -0.05
SMCR8-201ENST00000406438 TEFQ10587 303 aa14.72□□□□□ -0.05
SMCR8-201ENST00000406438 TRDNQ13061 729 aa14.72□□□□□ -0.05
SMCR8-201ENST00000406438 DDX49Q9Y6V7 483 aaKnown RBP14.72□□□□□ -0.05
SMCR8-201ENST00000406438 REC8O95072 547 aa14.71□□□□□ -0.05
SMCR8-201ENST00000406438 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
SMCR8-201ENST00000406438 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms