RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
FAM49A-202ENST00000406434 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
FAM49A-202ENST00000406434 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
FAM49A-202ENST00000406434 ZMYM3Q14202 1370 aa15.94■□□□□ 0.14
FAM49A-202ENST00000406434 RRP7BPQ9NSQ0 103 aa15.94■□□□□ 0.14
FAM49A-202ENST00000406434 ABCC5O15440 1437 aa15.93■□□□□ 0.14
FAM49A-202ENST00000406434 LMTK3Q96Q04 1460 aa15.93■□□□□ 0.14
FAM49A-202ENST00000406434 C3P01024 1663 aa15.92■□□□□ 0.14
FAM49A-202ENST00000406434 SETD1BQ9UPS6 1966 aaKnown RBP15.92■□□□□ 0.14
FAM49A-202ENST00000406434 CLTCQ00610 1675 aaKnown RBP15.91■□□□□ 0.14
FAM49A-202ENST00000406434 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
FAM49A-202ENST00000406434 MAST1Q9Y2H9 1570 aa15.9■□□□□ 0.14
FAM49A-202ENST00000406434 DAPK1P53355 1430 aa15.9■□□□□ 0.14
FAM49A-202ENST00000406434 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.14
FAM49A-202ENST00000406434 UHRF1BP1Q6BDS2 1440 aa15.87■□□□□ 0.13
FAM49A-202ENST00000406434 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
FAM49A-202ENST00000406434 PREX1Q8TCU6 1659 aa15.86■□□□□ 0.13
FAM49A-202ENST00000406434 ITGAEP38570 1179 aa15.86■□□□□ 0.13
FAM49A-202ENST00000406434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
FAM49A-202ENST00000406434 DNMT1P26358 1616 aaKnown RBP15.85■□□□□ 0.13
FAM49A-202ENST00000406434 MROH2AA6NES4 1674 aa15.85■□□□□ 0.13
FAM49A-202ENST00000406434 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
FAM49A-202ENST00000406434 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
FAM49A-202ENST00000406434 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
FAM49A-202ENST00000406434 SHANK2Q9UPX8 1470 aa15.84■□□□□ 0.13
FAM49A-202ENST00000406434 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
FAM49A-202ENST00000406434 PTPRKQ15262 1439 aa15.82■□□□□ 0.12
FAM49A-202ENST00000406434 NPATQ14207 1427 aa15.81■□□□□ 0.12
FAM49A-202ENST00000406434 KDM5DQ9BY66 1539 aa15.8■□□□□ 0.12
FAM49A-202ENST00000406434 NCOA1Q15788 1441 aa15.8■□□□□ 0.12
FAM49A-202ENST00000406434 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
FAM49A-202ENST00000406434 EIF2AK4Q9P2K8 1649 aaKnown RBP15.77■□□□□ 0.12
FAM49A-202ENST00000406434 ERBINQ96RT1 1412 aa15.77■□□□□ 0.12
FAM49A-202ENST00000406434 RNF17Q9BXT8 1623 aaKnown RBP15.77■□□□□ 0.11
FAM49A-202ENST00000406434 TNRQ92752 1358 aa15.76■□□□□ 0.11
FAM49A-202ENST00000406434 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
FAM49A-202ENST00000406434 KANK1Q14678 1352 aa15.75■□□□□ 0.11
FAM49A-202ENST00000406434 ABCC3O15438 1527 aa15.75■□□□□ 0.11
FAM49A-202ENST00000406434 PZPP20742 1482 aa15.74■□□□□ 0.11
FAM49A-202ENST00000406434 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
FAM49A-202ENST00000406434 FAM135AQ9P2D6 1515 aa15.74■□□□□ 0.11
FAM49A-202ENST00000406434 ADGRL2O95490 1459 aa15.73■□□□□ 0.11
FAM49A-202ENST00000406434 CEP152O94986 1710 aa15.73■□□□□ 0.11
FAM49A-202ENST00000406434 MROH1Q8NDA8 1641 aa15.72■□□□□ 0.11
FAM49A-202ENST00000406434 ANKRD50Q9ULJ7 1429 aa15.72■□□□□ 0.11
FAM49A-202ENST00000406434 STRCQ7RTU9 1775 aa15.72■□□□□ 0.11
FAM49A-202ENST00000406434 CAMSAP1Q5T5Y3 1602 aa15.71■□□□□ 0.11
FAM49A-202ENST00000406434 MYO3AQ8NEV4 1616 aa15.71■□□□□ 0.11
FAM49A-202ENST00000406434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.7■□□□□ 0.1
FAM49A-202ENST00000406434 ZC3H13Q5T200 1668 aaKnown RBP15.7■□□□□ 0.1
FAM49A-202ENST00000406434 CEP170BQ9Y4F5 1589 aaPredicted RBP15.7■□□□□ 0.1
FAM49A-202ENST00000406434 A2ML1A8K2U0 1454 aa15.69■□□□□ 0.1
FAM49A-202ENST00000406434 ROCK1Q13464 1354 aa15.68■□□□□ 0.1
FAM49A-202ENST00000406434 ILDR1Q86SU0 546 aaPredicted RBP15.68■□□□□ 0.1
FAM49A-202ENST00000406434 THEMISQ8N1K5 641 aaPredicted RBP15.68■□□□□ 0.1
FAM49A-202ENST00000406434 PRDM15P57071 1507 aaPredicted RBP15.67■□□□□ 0.1
FAM49A-202ENST00000406434 RRBP1Q9P2E9 1410 aaKnown RBP15.66■□□□□ 0.1
FAM49A-202ENST00000406434 PKD2Q13563 968 aa15.66■□□□□ 0.1
FAM49A-202ENST00000406434 DEPDC5O75140 1603 aa15.66■□□□□ 0.1
FAM49A-202ENST00000406434 ZNF142P52746 1687 aaPredicted RBP15.66■□□□□ 0.1
FAM49A-202ENST00000406434 ERVK-7P63135 1459 aa15.65■□□□□ 0.1
FAM49A-202ENST00000406434 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
FAM49A-202ENST00000406434 NLRP1Q9C000 1473 aa15.65■□□□□ 0.1
FAM49A-202ENST00000406434 ANKLE2Q86XL3 938 aa15.64■□□□□ 0.09
FAM49A-202ENST00000406434 PTPRTO14522 1441 aa15.64■□□□□ 0.09
FAM49A-202ENST00000406434 STAG3Q9UJ98 1225 aa15.63■□□□□ 0.09
FAM49A-202ENST00000406434 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
FAM49A-202ENST00000406434 SPATA31D1Q6ZQQ2 1576 aa15.63■□□□□ 0.09
FAM49A-202ENST00000406434 CERKQ8TCT0 537 aa15.62■□□□□ 0.09
FAM49A-202ENST00000406434 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
FAM49A-202ENST00000406434 PLA2R1Q13018 1463 aa15.61■□□□□ 0.09
FAM49A-202ENST00000406434 NUP155O75694 1391 aa15.61■□□□□ 0.09
FAM49A-202ENST00000406434 VWDEQ8N2E2 1590 aa15.61■□□□□ 0.09
FAM49A-202ENST00000406434 LMTK2Q8IWU2 1503 aa15.6■□□□□ 0.09
FAM49A-202ENST00000406434 IDI1Q13907 227 aa15.6■□□□□ 0.09
FAM49A-202ENST00000406434 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
FAM49A-202ENST00000406434 ZNF335Q9H4Z2 1342 aaPredicted RBP15.56■□□□□ 0.08
FAM49A-202ENST00000406434 TXNDC2Q86VQ3 553 aa15.56■□□□□ 0.08
FAM49A-202ENST00000406434 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
FAM49A-202ENST00000406434 EFCAB6Q5THR3 1501 aa15.56■□□□□ 0.08
FAM49A-202ENST00000406434 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
FAM49A-202ENST00000406434 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
FAM49A-202ENST00000406434 EID1Q9Y6B2 187 aa15.55■□□□□ 0.08
FAM49A-202ENST00000406434 UNC13BO14795 1591 aa15.55■□□□□ 0.08
FAM49A-202ENST00000406434 TET3O43151 1660 aa15.54■□□□□ 0.08
FAM49A-202ENST00000406434 LTKP29376 864 aa15.53■□□□□ 0.08
FAM49A-202ENST00000406434 NOS1P29475 1434 aa15.53■□□□□ 0.08
FAM49A-202ENST00000406434 NAIPQ13075 1403 aa15.53■□□□□ 0.08
FAM49A-202ENST00000406434 POLR1AO95602 1720 aaPredicted RBP15.53■□□□□ 0.08
FAM49A-202ENST00000406434 UBR1Q8IWV7 1749 aa15.53■□□□□ 0.08
FAM49A-202ENST00000406434 PIK3C2BO00750 1634 aa15.52■□□□□ 0.07
FAM49A-202ENST00000406434 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
FAM49A-202ENST00000406434 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
FAM49A-202ENST00000406434 SYNMO15061 1565 aa15.51■□□□□ 0.07
FAM49A-202ENST00000406434 GCC2Q8IWJ2 1684 aa15.51■□□□□ 0.07
FAM49A-202ENST00000406434 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
FAM49A-202ENST00000406434 BCANQ96GW7 911 aa15.49■□□□□ 0.07
FAM49A-202ENST00000406434 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
FAM49A-202ENST00000406434 E9PCH4 1651 aa15.49■□□□□ 0.07
FAM49A-202ENST00000406434 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms