RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 RRP9O43818 475 aaKnown RBP9.32□□□□□ -0.92
HDAC9-202ENST00000405010 TRAK2O60296 914 aa9.32□□□□□ -0.92
HDAC9-202ENST00000405010 E9PSI1 815 aa9.32□□□□□ -0.92
HDAC9-202ENST00000405010 ADAMTS8Q9UP79 889 aa9.32□□□□□ -0.92
HDAC9-202ENST00000405010 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
HDAC9-202ENST00000405010 FGD5Q6ZNL6 1462 aa9.31□□□□□ -0.92
HDAC9-202ENST00000405010 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
HDAC9-202ENST00000405010 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
HDAC9-202ENST00000405010 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-202ENST00000405010 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
HDAC9-202ENST00000405010 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
HDAC9-202ENST00000405010 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
HDAC9-202ENST00000405010 FAM13BQ9NYF5 915 aa9.3□□□□□ -0.92
HDAC9-202ENST00000405010 C20orf194Q5TEA3 1177 aa9.3□□□□□ -0.92
HDAC9-202ENST00000405010 SKOR2Q2VWA4 1001 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-202ENST00000405010 ITPRIPQ8IWB1 547 aa9.29□□□□□ -0.92
HDAC9-202ENST00000405010 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
HDAC9-202ENST00000405010 MORC1Q86VD1 984 aa9.29□□□□□ -0.92
HDAC9-202ENST00000405010 MIA2Q96PC5 1412 aa9.29□□□□□ -0.92
HDAC9-202ENST00000405010 PANK1Q8TE04 598 aa9.29□□□□□ -0.92
HDAC9-202ENST00000405010 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-202ENST00000405010 ESPNB1AK53 854 aa9.28□□□□□ -0.92
HDAC9-202ENST00000405010 CASC1Q6TDU7 716 aa9.28□□□□□ -0.92
HDAC9-202ENST00000405010 PCF11O94913 1555 aaKnown RBP9.28□□□□□ -0.92
HDAC9-202ENST00000405010 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
HDAC9-202ENST00000405010 C22orf23Q9BZE7 217 aa9.28□□□□□ -0.92
HDAC9-202ENST00000405010 EIF3AQ14152 1382 aaKnown RBP9.28□□□□□ -0.92
HDAC9-202ENST00000405010 MCM4P33991 863 aa9.27□□□□□ -0.92
HDAC9-202ENST00000405010 ZMYND15Q9H091 742 aa9.27□□□□□ -0.92
HDAC9-202ENST00000405010 TPM2P07951 284 aa9.27□□□□□ -0.93
HDAC9-202ENST00000405010 RRP7AQ9Y3A4 280 aaKnown RBP9.27□□□□□ -0.93
HDAC9-202ENST00000405010 RNF123Q5XPI4 1314 aa9.27□□□□□ -0.93
HDAC9-202ENST00000405010 SMC4Q9NTJ3 1288 aa9.27□□□□□ -0.93
HDAC9-202ENST00000405010 SLC24A1O60721 1099 aa9.26□□□□□ -0.93
HDAC9-202ENST00000405010 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-202ENST00000405010 CHMP4BQ9H444 224 aaKnown RBP9.26□□□□□ -0.93
HDAC9-202ENST00000405010 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
HDAC9-202ENST00000405010 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
HDAC9-202ENST00000405010 KIAA2012Q0VF49 1180 aa9.26□□□□□ -0.93
HDAC9-202ENST00000405010 GRPEL1Q9HAV7 217 aa9.26□□□□□ -0.93
HDAC9-202ENST00000405010 BCAR3O75815 825 aa9.25□□□□□ -0.93
HDAC9-202ENST00000405010 CHAF1AQ13111 956 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-202ENST00000405010 U2AF1L5P0DN76 240 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-202ENST00000405010 U2AF1Q01081 240 aaKnown RBP eCLIP9.25□□□□□ -0.93
HDAC9-202ENST00000405010 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
HDAC9-202ENST00000405010 IPO8O15397 1037 aaKnown RBP9.25□□□□□ -0.93
HDAC9-202ENST00000405010 CDK11BP21127 795 aaKnown RBP9.25□□□□□ -0.93
HDAC9-202ENST00000405010 CCDC144AA2RUR9 1427 aa9.25□□□□□ -0.93
HDAC9-202ENST00000405010 PTPRKQ15262 1439 aa9.25□□□□□ -0.93
HDAC9-202ENST00000405010 AQRO60306 1485 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC9-202ENST00000405010 NASPP49321 788 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-202ENST00000405010 R3HCC1Q9Y3T6 440 aaKnown RBP9.24□□□□□ -0.93
HDAC9-202ENST00000405010 ISY1Q9ULR0 285 aaKnown RBP9.23□□□□□ -0.93
HDAC9-202ENST00000405010 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 RAD54L2Q9Y4B4 1467 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 PDE3AQ14432 1141 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 ZKSCAN2Q63HK3 967 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 NGEFQ8N5V2 710 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 RBM10P98175 930 aaKnown RBP9.23□□□□□ -0.93
HDAC9-202ENST00000405010 KIAA1211Q6ZU35 1233 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 MAP7D2Q96T17 732 aa9.23□□□□□ -0.93
HDAC9-202ENST00000405010 HNRNPMP52272 730 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC9-202ENST00000405010 RPRD2Q5VT52 1461 aaKnown RBP9.22□□□□□ -0.93
HDAC9-202ENST00000405010 EHBP1L1Q8N3D4 1523 aa9.22□□□□□ -0.93
HDAC9-202ENST00000405010 KIAA1107Q9UPP5 1409 aa9.22□□□□□ -0.93
HDAC9-202ENST00000405010 PPP2R1AP30153 589 aa9.22□□□□□ -0.93
HDAC9-202ENST00000405010 C8orf34Q49A92 452 aa9.22□□□□□ -0.93
HDAC9-202ENST00000405010 CFAP44Q96MT7 982 aa9.21□□□□□ -0.93
HDAC9-202ENST00000405010 CLCN1P35523 988 aa9.21□□□□□ -0.94
HDAC9-202ENST00000405010 XRCC6P12956 609 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC9-202ENST00000405010 AAMPQ13685 434 aa9.21□□□□□ -0.94
HDAC9-202ENST00000405010 NBPF1Q3BBV0 1214 aa9.21□□□□□ -0.94
HDAC9-202ENST00000405010 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-202ENST00000405010 ANKRD50Q9ULJ7 1429 aa9.2□□□□□ -0.94
HDAC9-202ENST00000405010 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
HDAC9-202ENST00000405010 A0A0U1RQG5 324 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-202ENST00000405010 DZIP1LQ8IYY4 767 aaKnown RBP9.2□□□□□ -0.94
HDAC9-202ENST00000405010 SYAP1Q96A49 352 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-202ENST00000405010 PANK2Q9BZ23 570 aa9.2□□□□□ -0.94
HDAC9-202ENST00000405010 PODXL2Q9NZ53 605 aa9.2□□□□□ -0.94
HDAC9-202ENST00000405010 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
HDAC9-202ENST00000405010 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
HDAC9-202ENST00000405010 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-202ENST00000405010 SENP3Q9H4L4 574 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-202ENST00000405010 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
HDAC9-202ENST00000405010 FANCD2Q9BXW9 1451 aa9.19□□□□□ -0.94
HDAC9-202ENST00000405010 APBB1O00213 710 aa9.19□□□□□ -0.94
HDAC9-202ENST00000405010 SLFN5Q08AF3 891 aa9.19□□□□□ -0.94
HDAC9-202ENST00000405010 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-202ENST00000405010 FOXD4L4Q8WXT5 416 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-202ENST00000405010 DHX29Q7Z478 1369 aaKnown RBP9.18□□□□□ -0.94
HDAC9-202ENST00000405010 ANKRD45Q5TZF3 282 aa9.18□□□□□ -0.94
HDAC9-202ENST00000405010 BIVM-ERCC5R4GMW8 1640 aa9.18□□□□□ -0.94
HDAC9-202ENST00000405010 DUSP27Q5VZP5 1158 aa9.18□□□□□ -0.94
HDAC9-202ENST00000405010 LNPKQ9C0E8 428 aa9.18□□□□□ -0.94
HDAC9-202ENST00000405010 MTERF4Q7Z6M4 381 aaKnown RBP9.18□□□□□ -0.94
HDAC9-202ENST00000405010 DDX19BQ9UMR2 479 aa9.18□□□□□ -0.94
HDAC9-202ENST00000405010 NCAPD3P42695 1498 aa9.17□□□□□ -0.94
HDAC9-202ENST00000405010 PDCL3Q9H2J4 239 aa9.17□□□□□ -0.94
HDAC9-202ENST00000405010 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms