RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
KDM5C-205ENST00000404049 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
KDM5C-205ENST00000404049 HMMRO75330 724 aa18.91■□□□□ 0.62
KDM5C-205ENST00000404049 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
KDM5C-205ENST00000404049 DDX49Q9Y6V7 483 aaKnown RBP18.91■□□□□ 0.62
KDM5C-205ENST00000404049 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
KDM5C-205ENST00000404049 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
KDM5C-205ENST00000404049 KIF15Q9NS87 1388 aa18.9■□□□□ 0.62
KDM5C-205ENST00000404049 PLIN1O60240 522 aa18.9■□□□□ 0.62
KDM5C-205ENST00000404049 GPATCH3Q96I76 525 aa18.9■□□□□ 0.62
KDM5C-205ENST00000404049 TEX35Q5T0J7 233 aa18.89■□□□□ 0.62
KDM5C-205ENST00000404049 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.62
KDM5C-205ENST00000404049 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
KDM5C-205ENST00000404049 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
KDM5C-205ENST00000404049 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
KDM5C-205ENST00000404049 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
KDM5C-205ENST00000404049 STK31Q9BXU1 1019 aa18.87■□□□□ 0.61
KDM5C-205ENST00000404049 CEP89Q96ST8 783 aa18.87■□□□□ 0.61
KDM5C-205ENST00000404049 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
KDM5C-205ENST00000404049 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
KDM5C-205ENST00000404049 ZBED9Q6R2W3 1325 aa18.86■□□□□ 0.61
KDM5C-205ENST00000404049 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
KDM5C-205ENST00000404049 PRM3Q9NNZ6 103 aa18.86■□□□□ 0.61
KDM5C-205ENST00000404049 CCDC70Q6NSX1 233 aa18.86■□□□□ 0.61
KDM5C-205ENST00000404049 KIF16BQ96L93 1317 aa18.86■□□□□ 0.61
KDM5C-205ENST00000404049 PAK3O75914 559 aaPredicted RBP18.85■□□□□ 0.61
KDM5C-205ENST00000404049 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
KDM5C-205ENST00000404049 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
KDM5C-205ENST00000404049 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
KDM5C-205ENST00000404049 TERF2IPQ9NYB0 399 aa18.83■□□□□ 0.61
KDM5C-205ENST00000404049 HDAC5Q9UQL6 1122 aa18.83■□□□□ 0.6
KDM5C-205ENST00000404049 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
KDM5C-205ENST00000404049 CREBRFQ8IUR6 639 aa18.82■□□□□ 0.6
KDM5C-205ENST00000404049 RRP7AQ9Y3A4 280 aaKnown RBP18.8■□□□□ 0.6
KDM5C-205ENST00000404049 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
KDM5C-205ENST00000404049 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
KDM5C-205ENST00000404049 FOXD4L6Q3SYB3 417 aaPredicted RBP18.79■□□□□ 0.6
KDM5C-205ENST00000404049 FOXD4L3Q6VB84 417 aaPredicted RBP18.79■□□□□ 0.6
KDM5C-205ENST00000404049 PRKRIP1Q9H875 184 aaPredicted RBP18.79■□□□□ 0.6
KDM5C-205ENST00000404049 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
KDM5C-205ENST00000404049 GORABQ5T7V8 394 aa18.79■□□□□ 0.6
KDM5C-205ENST00000404049 RRP12Q5JTH9 1297 aaKnown RBP18.79■□□□□ 0.6
KDM5C-205ENST00000404049 RSPH4AQ5TD94 716 aa18.78■□□□□ 0.6
KDM5C-205ENST00000404049 CCAR2Q8N163 923 aaKnown RBP18.78■□□□□ 0.6
KDM5C-205ENST00000404049 FAM13BQ9NYF5 915 aa18.78■□□□□ 0.6
KDM5C-205ENST00000404049 PDE4CQ08493 712 aa18.78■□□□□ 0.6
KDM5C-205ENST00000404049 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
KDM5C-205ENST00000404049 TSR1Q2NL82 804 aaKnown RBP18.78■□□□□ 0.6
KDM5C-205ENST00000404049 APPP05067 770 aa18.78■□□□□ 0.6
KDM5C-205ENST00000404049 CHMP3Q9Y3E7 222 aa18.77■□□□□ 0.6
KDM5C-205ENST00000404049 SF3A1Q15459 793 aaKnown RBP18.77■□□□□ 0.6
KDM5C-205ENST00000404049 KIF3AQ9Y496 699 aa18.77■□□□□ 0.6
KDM5C-205ENST00000404049 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
KDM5C-205ENST00000404049 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.59
KDM5C-205ENST00000404049 GOLGA6L19H0YKK7 550 aa18.76■□□□□ 0.59
KDM5C-205ENST00000404049 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
KDM5C-205ENST00000404049 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
KDM5C-205ENST00000404049 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
KDM5C-205ENST00000404049 KIF3BO15066 747 aa18.76■□□□□ 0.59
KDM5C-205ENST00000404049 RASSF8Q8NHQ8 419 aa18.76■□□□□ 0.59
KDM5C-205ENST00000404049 ZNF330Q9Y3S2 320 aaPredicted RBP18.76■□□□□ 0.59
KDM5C-205ENST00000404049 H3BQV1 296 aa18.75■□□□□ 0.59
KDM5C-205ENST00000404049 IFFO2Q5TF58 517 aa18.75■□□□□ 0.59
KDM5C-205ENST00000404049 ZNF592Q92610 1267 aa18.75■□□□□ 0.59
KDM5C-205ENST00000404049 RILPL2Q969X0 211 aa18.75■□□□□ 0.59
KDM5C-205ENST00000404049 E9PSI1 815 aa18.75■□□□□ 0.59
KDM5C-205ENST00000404049 PANK3Q9H999 370 aa18.75■□□□□ 0.59
KDM5C-205ENST00000404049 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
KDM5C-205ENST00000404049 TPM1P09493 284 aa18.74■□□□□ 0.59
KDM5C-205ENST00000404049 ATP6V1DQ9Y5K8 247 aa18.74■□□□□ 0.59
KDM5C-205ENST00000404049 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
KDM5C-205ENST00000404049 RAPGEF2Q9Y4G8 1499 aa18.74■□□□□ 0.59
KDM5C-205ENST00000404049 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
KDM5C-205ENST00000404049 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
KDM5C-205ENST00000404049 BECN2A8MW95 431 aa18.72■□□□□ 0.59
KDM5C-205ENST00000404049 MTERF4Q7Z6M4 381 aaKnown RBP18.72■□□□□ 0.59
KDM5C-205ENST00000404049 FAM43AQ8N2R8 423 aa18.72■□□□□ 0.59
KDM5C-205ENST00000404049 ST20-MTHFSA0A0A6YYL1 179 aa18.71■□□□□ 0.59
KDM5C-205ENST00000404049 HNRNPMP52272 730 aaKnown RBP eCLIP18.71■□□□□ 0.59
KDM5C-205ENST00000404049 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
KDM5C-205ENST00000404049 MAP7D2Q96T17 732 aa18.7■□□□□ 0.58
KDM5C-205ENST00000404049 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
KDM5C-205ENST00000404049 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
KDM5C-205ENST00000404049 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
KDM5C-205ENST00000404049 FHOD3Q2V2M9 1422 aa18.69■□□□□ 0.58
KDM5C-205ENST00000404049 TPD52L1Q16890 204 aaPredicted RBP18.69■□□□□ 0.58
KDM5C-205ENST00000404049 FAM184AQ8NB25 1140 aa18.69■□□□□ 0.58
KDM5C-205ENST00000404049 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
KDM5C-205ENST00000404049 CDR1P51861 262 aa18.68■□□□□ 0.58
KDM5C-205ENST00000404049 TPM2P07951 284 aa18.68■□□□□ 0.58
KDM5C-205ENST00000404049 ARGLU1Q9NWB6 273 aaPredicted RBP18.68■□□□□ 0.58
KDM5C-205ENST00000404049 WASHC2CQ9Y4E1 1318 aa18.67■□□□□ 0.58
KDM5C-205ENST00000404049 PES1O00541 588 aaKnown RBP18.67■□□□□ 0.58
KDM5C-205ENST00000404049 CHMP4CQ96CF2 233 aa18.67■□□□□ 0.58
KDM5C-205ENST00000404049 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
KDM5C-205ENST00000404049 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
KDM5C-205ENST00000404049 AMPHP49418 695 aa18.65■□□□□ 0.58
KDM5C-205ENST00000404049 PKNOX2Q96KN3 472 aa18.65■□□□□ 0.58
KDM5C-205ENST00000404049 AK7Q96M32 723 aa18.65■□□□□ 0.58
KDM5C-205ENST00000404049 CCDC66A2RUB6 948 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms