RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 GGT6Q6P531 493 aa15.43■□□□□ 0.06
NUP43-204ENST00000403890 SHANK2Q9UPX8 1470 aa15.42■□□□□ 0.06
NUP43-204ENST00000403890 SUPT6HQ7KZ85 1726 aaKnown RBP15.42■□□□□ 0.06
NUP43-204ENST00000403890 ITSN2Q9NZM3 1697 aa15.41■□□□□ 0.06
NUP43-204ENST00000403890 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
NUP43-204ENST00000403890 ZNF777Q9ULD5 760 aaPredicted RBP15.41■□□□□ 0.06
NUP43-204ENST00000403890 PREX2Q70Z35 1606 aa15.4■□□□□ 0.06
NUP43-204ENST00000403890 CLTCQ00610 1675 aaKnown RBP15.4■□□□□ 0.06
NUP43-204ENST00000403890 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
NUP43-204ENST00000403890 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
NUP43-204ENST00000403890 HNRNPMP52272 730 aaKnown RBP eCLIP15.39■□□□□ 0.05
NUP43-204ENST00000403890 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
NUP43-204ENST00000403890 ANKLE2Q86XL3 938 aa15.37■□□□□ 0.05
NUP43-204ENST00000403890 A2MP01023 1474 aa15.36■□□□□ 0.05
NUP43-204ENST00000403890 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
NUP43-204ENST00000403890 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
NUP43-204ENST00000403890 RGS17Q9UGC6 210 aaPredicted RBP15.35■□□□□ 0.05
NUP43-204ENST00000403890 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.04
NUP43-204ENST00000403890 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
NUP43-204ENST00000403890 NEURL4Q96JN8 1562 aa15.32■□□□□ 0.04
NUP43-204ENST00000403890 ALKQ9UM73 1620 aa15.32■□□□□ 0.04
NUP43-204ENST00000403890 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
NUP43-204ENST00000403890 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
NUP43-204ENST00000403890 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
NUP43-204ENST00000403890 POLA2Q14181 598 aa15.31■□□□□ 0.04
NUP43-204ENST00000403890 TNRQ92752 1358 aa15.31■□□□□ 0.04
NUP43-204ENST00000403890 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
NUP43-204ENST00000403890 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
NUP43-204ENST00000403890 LRRIQ1Q96JM4 1722 aa15.31■□□□□ 0.04
NUP43-204ENST00000403890 CCDC18Q5T9S5 1454 aa15.3■□□□□ 0.04
NUP43-204ENST00000403890 VWDEQ8N2E2 1590 aa15.3■□□□□ 0.04
NUP43-204ENST00000403890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
NUP43-204ENST00000403890 POLR1AO95602 1720 aaPredicted RBP15.29■□□□□ 0.04
NUP43-204ENST00000403890 CFDP1Q9UEE9 299 aaPredicted RBP15.29■□□□□ 0.04
NUP43-204ENST00000403890 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
NUP43-204ENST00000403890 PLEKHH2Q8IVE3 1493 aa15.28■□□□□ 0.04
NUP43-204ENST00000403890 NPHP4O75161 1426 aaPredicted RBP15.28■□□□□ 0.04
NUP43-204ENST00000403890 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
NUP43-204ENST00000403890 MED14O60244 1454 aa15.27■□□□□ 0.03
NUP43-204ENST00000403890 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
NUP43-204ENST00000403890 INO80Q9ULG1 1556 aaPredicted RBP15.26■□□□□ 0.03
NUP43-204ENST00000403890 POTEAQ6S8J7 498 aa15.25■□□□□ 0.03
NUP43-204ENST00000403890 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
NUP43-204ENST00000403890 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
NUP43-204ENST00000403890 KIF3BO15066 747 aa15.23■□□□□ 0.03
NUP43-204ENST00000403890 DHX29Q7Z478 1369 aaKnown RBP15.23■□□□□ 0.03
NUP43-204ENST00000403890 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
NUP43-204ENST00000403890 WASHC2CQ9Y4E1 1318 aa15.22■□□□□ 0.03
NUP43-204ENST00000403890 PZPP20742 1482 aa15.22■□□□□ 0.03
NUP43-204ENST00000403890 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
NUP43-204ENST00000403890 DEPDC5O75140 1603 aa15.21■□□□□ 0.03
NUP43-204ENST00000403890 NLRP1Q9C000 1473 aa15.21■□□□□ 0.03
NUP43-204ENST00000403890 UGGT1Q9NYU2 1555 aa15.21■□□□□ 0.03
NUP43-204ENST00000403890 ADGBQ8N7X0 1667 aa15.21■□□□□ 0.03
NUP43-204ENST00000403890 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.02
NUP43-204ENST00000403890 RNF17Q9BXT8 1623 aaKnown RBP15.19■□□□□ 0.02
NUP43-204ENST00000403890 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
NUP43-204ENST00000403890 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
NUP43-204ENST00000403890 ZNF644Q9H582 1327 aaPredicted RBP15.17■□□□□ 0.02
NUP43-204ENST00000403890 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
NUP43-204ENST00000403890 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
NUP43-204ENST00000403890 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
NUP43-204ENST00000403890 SYNMO15061 1565 aa15.15■□□□□ 0.02
NUP43-204ENST00000403890 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
NUP43-204ENST00000403890 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
NUP43-204ENST00000403890 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
NUP43-204ENST00000403890 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
NUP43-204ENST00000403890 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
NUP43-204ENST00000403890 TXNDC2Q86VQ3 553 aa15.09■□□□□ 0.01
NUP43-204ENST00000403890 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
NUP43-204ENST00000403890 SCAF11Q99590 1463 aaKnown RBP15.08■□□□□ 0
NUP43-204ENST00000403890 LTKP29376 864 aa15.07■□□□□ 0
NUP43-204ENST00000403890 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
NUP43-204ENST00000403890 EID1Q9Y6B2 187 aa15.05■□□□□ -0
NUP43-204ENST00000403890 ZC3H13Q5T200 1668 aaKnown RBP15.05■□□□□ -0
NUP43-204ENST00000403890 CCDC141Q6ZP82 1450 aa15.03■□□□□ -0
NUP43-204ENST00000403890 TMEM94Q12767 1356 aa15.03■□□□□ -0
NUP43-204ENST00000403890 TSPY4P0CV99 314 aa15.03■□□□□ -0
NUP43-204ENST00000403890 TSPY10P0CW01 314 aa15.03■□□□□ -0
NUP43-204ENST00000403890 SETD1AO15047 1707 aaKnown RBP15.03■□□□□ -0
NUP43-204ENST00000403890 TIAM1Q13009 1591 aa15.02■□□□□ -0
NUP43-204ENST00000403890 ERVK-7P63135 1459 aa15.02■□□□□ -0
NUP43-204ENST00000403890 XIRP1Q702N8 1843 aaKnown RBP15.02■□□□□ -0
NUP43-204ENST00000403890 KCNA6P17658 529 aa15.01□□□□□ -0.01
NUP43-204ENST00000403890 PROSER2Q86WR7 435 aaPredicted RBP15.01□□□□□ -0.01
NUP43-204ENST00000403890 JCADQ9P266 1359 aa15□□□□□ -0.01
NUP43-204ENST00000403890 AKT1S1Q96B36 256 aa15□□□□□ -0.01
NUP43-204ENST00000403890 ABCC3O15438 1527 aa15□□□□□ -0.01
NUP43-204ENST00000403890 NCOA2Q15596 1464 aa15□□□□□ -0.01
NUP43-204ENST00000403890 ARHGAP23Q9P227 1491 aa15□□□□□ -0.01
NUP43-204ENST00000403890 SLIT1O75093 1534 aa14.99□□□□□ -0.01
NUP43-204ENST00000403890 ROBO1Q9Y6N7 1651 aa14.99□□□□□ -0.01
NUP43-204ENST00000403890 UBR1Q8IWV7 1749 aa14.98□□□□□ -0.01
NUP43-204ENST00000403890 ZNF772Q68DY9 489 aaPredicted RBP14.98□□□□□ -0.01
NUP43-204ENST00000403890 TRIM52Q96A61 297 aa14.98□□□□□ -0.01
NUP43-204ENST00000403890 RBM33Q96EV2 1170 aaKnown RBP14.98□□□□□ -0.01
NUP43-204ENST00000403890 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
NUP43-204ENST00000403890 LRRC9Q6ZRR7 1453 aa14.97□□□□□ -0.01
NUP43-204ENST00000403890 CEP162Q5TB80 1403 aa14.97□□□□□ -0.01
NUP43-204ENST00000403890 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms