RNA–Protein interactions for RNA: ENST00000403792.7

SMYD3-204, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SMYD3, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-204ENST00000403792 MIA2Q96PC5 1412 aa28.66■■■□□ 2.18
SMYD3-204ENST00000403792 CCDC141Q6ZP82 1450 aa28.66■■■□□ 2.18
SMYD3-204ENST00000403792 ILDR2Q71H61 639 aa28.64■■■□□ 2.18
SMYD3-204ENST00000403792 ZNF335Q9H4Z2 1342 aaPredicted RBP28.64■■■□□ 2.17
SMYD3-204ENST00000403792 DHX29Q7Z478 1369 aaKnown RBP28.63■■■□□ 2.17
SMYD3-204ENST00000403792 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
SMYD3-204ENST00000403792 RSPH4AQ5TD94 716 aa28.59■■■□□ 2.17
SMYD3-204ENST00000403792 A2ML1A8K2U0 1454 aa28.58■■■□□ 2.17
SMYD3-204ENST00000403792 SPATA31D1Q6ZQQ2 1576 aa28.55■■■□□ 2.16
SMYD3-204ENST00000403792 DNMT1P26358 1616 aaKnown RBP28.54■■■□□ 2.16
SMYD3-204ENST00000403792 FGD6Q6ZV73 1430 aa28.54■■■□□ 2.16
SMYD3-204ENST00000403792 PTPN23Q9H3S7 1636 aa28.54■■■□□ 2.16
SMYD3-204ENST00000403792 SOCS7O14512 581 aa28.52■■■□□ 2.16
SMYD3-204ENST00000403792 KIF3BO15066 747 aa28.52■■■□□ 2.16
SMYD3-204ENST00000403792 FAM135AQ9P2D6 1515 aa28.52■■■□□ 2.16
SMYD3-204ENST00000403792 TSPY4P0CV99 314 aa28.51■■■□□ 2.15
SMYD3-204ENST00000403792 TSPY10P0CW01 314 aa28.51■■■□□ 2.15
SMYD3-204ENST00000403792 UBAP1LF5GYI3 381 aa28.5■■■□□ 2.15
SMYD3-204ENST00000403792 KDM5DQ9BY66 1539 aa28.49■■■□□ 2.15
SMYD3-204ENST00000403792 PZPP20742 1482 aa28.49■■■□□ 2.15
SMYD3-204ENST00000403792 FBXO31Q5XUX0 539 aaPredicted RBP28.49■■■□□ 2.15
SMYD3-204ENST00000403792 TNRQ92752 1358 aa28.49■■■□□ 2.15
SMYD3-204ENST00000403792 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.15
SMYD3-204ENST00000403792 WASHC2CQ9Y4E1 1318 aa28.43■■■□□ 2.14
SMYD3-204ENST00000403792 NEURL4Q96JN8 1562 aa28.42■■■□□ 2.14
SMYD3-204ENST00000403792 POLR1AO95602 1720 aaPredicted RBP28.4■■■□□ 2.14
SMYD3-204ENST00000403792 CROCC2H7BZ55 1655 aa28.4■■■□□ 2.14
SMYD3-204ENST00000403792 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
SMYD3-204ENST00000403792 ABCC5O15440 1437 aa28.38■■■□□ 2.13
SMYD3-204ENST00000403792 SHANK2Q9UPX8 1470 aa28.38■■■□□ 2.13
SMYD3-204ENST00000403792 DAPK1P53355 1430 aa28.37■■■□□ 2.13
SMYD3-204ENST00000403792 NLRP1Q9C000 1473 aa28.37■■■□□ 2.13
SMYD3-204ENST00000403792 CPS1P31327 1500 aa28.36■■■□□ 2.13
SMYD3-204ENST00000403792 FAM50AQ14320 339 aaKnown RBP28.35■■■□□ 2.13
SMYD3-204ENST00000403792 THEMISQ8N1K5 641 aaPredicted RBP28.35■■■□□ 2.13
SMYD3-204ENST00000403792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.138e-11■■■■■ 165.3
SMYD3-204ENST00000403792 ANKLE2Q86XL3 938 aa28.34■■■□□ 2.13
SMYD3-204ENST00000403792 MED14O60244 1454 aa28.31■■■□□ 2.12
SMYD3-204ENST00000403792 UGGT1Q9NYU2 1555 aa28.31■■■□□ 2.12
SMYD3-204ENST00000403792 RNF17Q9BXT8 1623 aaKnown RBP28.31■■■□□ 2.12
SMYD3-204ENST00000403792 DEPDC5O75140 1603 aa28.29■■■□□ 2.12
SMYD3-204ENST00000403792 VWDEQ8N2E2 1590 aa28.28■■■□□ 2.12
SMYD3-204ENST00000403792 ABCC3O15438 1527 aa28.28■■■□□ 2.12
SMYD3-204ENST00000403792 TOM1O60784 492 aa28.27■■■□□ 2.12
SMYD3-204ENST00000403792 DUOX2Q9NRD8 1548 aa28.27■■■□□ 2.12
SMYD3-204ENST00000403792 NPHP4O75161 1426 aaPredicted RBP28.26■■■□□ 2.12
SMYD3-204ENST00000403792 KIF15Q9NS87 1388 aa28.26■■■□□ 2.12
SMYD3-204ENST00000403792 ZC3H13Q5T200 1668 aaKnown RBP28.25■■■□□ 2.11
SMYD3-204ENST00000403792 EIF2AK4Q9P2K8 1649 aaKnown RBP28.25■■■□□ 2.11
SMYD3-204ENST00000403792 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
SMYD3-204ENST00000403792 HSPA1LP34931 641 aa28.23■■■□□ 2.11
SMYD3-204ENST00000403792 RRP7BPQ9NSQ0 103 aa28.23■■■□□ 2.11
SMYD3-204ENST00000403792 ANKRD30AQ9BXX3 1397 aa28.22■■■□□ 2.11
SMYD3-204ENST00000403792 MROH1Q8NDA8 1641 aa28.21■■■□□ 2.11
SMYD3-204ENST00000403792 PIP4K2BP78356 416 aa28.21■■■□□ 2.11
SMYD3-204ENST00000403792 ERVK-7P63135 1459 aa28.21■■■□□ 2.11
SMYD3-204ENST00000403792 SCAF1Q9H7N4 1312 aaKnown RBP28.2■■■□□ 2.11
SMYD3-204ENST00000403792 IQGAP1P46940 1657 aa28.18■■■□□ 2.1
SMYD3-204ENST00000403792 ERBINQ96RT1 1412 aa28.18■■■□□ 2.1
SMYD3-204ENST00000403792 ADGRL2O95490 1459 aa28.17■■■□□ 2.1
SMYD3-204ENST00000403792 ALKQ9UM73 1620 aa28.16■■■□□ 2.1
SMYD3-204ENST00000403792 MED1Q15648 1581 aaPredicted RBP28.12■■■□□ 2.09
SMYD3-204ENST00000403792 CEP152O94986 1710 aa28.11■■■□□ 2.09
SMYD3-204ENST00000403792 STRCP1A6NGW2 1772 aa28.1■■■□□ 2.09
SMYD3-204ENST00000403792 LRRC7Q96NW7 1537 aa28.09■■■□□ 2.09
SMYD3-204ENST00000403792 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
SMYD3-204ENST00000403792 ARHGAP31Q2M1Z3 1444 aa28.09■■■□□ 2.09
SMYD3-204ENST00000403792 ITGAEP38570 1179 aa28.08■■■□□ 2.09
SMYD3-204ENST00000403792 RRBP1Q9P2E9 1410 aaKnown RBP28.08■■■□□ 2.09
SMYD3-204ENST00000403792 PRDM15P57071 1507 aaPredicted RBP28.07■■■□□ 2.08
SMYD3-204ENST00000403792 SYNMO15061 1565 aa28.05■■■□□ 2.08
SMYD3-204ENST00000403792 SCAF11Q99590 1463 aaKnown RBP28.05■■■□□ 2.08
SMYD3-204ENST00000403792 ARHGAP23Q9P227 1491 aa28.05■■■□□ 2.08
SMYD3-204ENST00000403792 CFAP65Q6ZU64 1925 aaKnown RBP28.04■■■□□ 2.08
SMYD3-204ENST00000403792 SLIT1O75093 1534 aa28.03■■■□□ 2.08
SMYD3-204ENST00000403792 ANKRD50Q9ULJ7 1429 aa28.02■■■□□ 2.08
SMYD3-204ENST00000403792 ROCK1Q13464 1354 aa28.02■■■□□ 2.08
SMYD3-204ENST00000403792 LTKP29376 864 aa28.02■■■□□ 2.08
SMYD3-204ENST00000403792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.01■■■□□ 2.071e-6■■□□□ 12.7
SMYD3-204ENST00000403792 KANK1Q14678 1352 aa27.99■■■□□ 2.07
SMYD3-204ENST00000403792 TXNDC2Q86VQ3 553 aa27.98■■■□□ 2.07
SMYD3-204ENST00000403792 EID1Q9Y6B2 187 aa27.93■■■□□ 2.06
SMYD3-204ENST00000403792 TMEM2Q9UHN6 1383 aa27.92■■■□□ 2.06
SMYD3-204ENST00000403792 PIK3C2BO00750 1634 aa27.92■■■□□ 2.06
SMYD3-204ENST00000403792 LMTK2Q8IWU2 1503 aa27.91■■■□□ 2.06
SMYD3-204ENST00000403792 PHF23Q9BUL5 403 aaPredicted RBP27.88■■■□□ 2.05
SMYD3-204ENST00000403792 KDM5AP29375 1690 aaKnown RBP27.87■■■□□ 2.05
SMYD3-204ENST00000403792 XIRP1Q702N8 1843 aaKnown RBP27.87■■■□□ 2.05
SMYD3-204ENST00000403792 UNC13BO14795 1591 aa27.86■■■□□ 2.05
SMYD3-204ENST00000403792 IDI1Q13907 227 aa27.85■■■□□ 2.05
SMYD3-204ENST00000403792 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
SMYD3-204ENST00000403792 SENP3Q9H4L4 574 aaPredicted RBP27.84■■■□□ 2.05
SMYD3-204ENST00000403792 STAG3Q9UJ98 1225 aa27.83■■■□□ 2.05
SMYD3-204ENST00000403792 NOS1P29475 1434 aa27.82■■■□□ 2.04
SMYD3-204ENST00000403792 TET3O43151 1660 aa27.79■■■□□ 2.04
SMYD3-204ENST00000403792 FAM135BQ49AJ0 1406 aa27.78■■■□□ 2.04
SMYD3-204ENST00000403792 KCNA6P17658 529 aa27.78■■■□□ 2.04
SMYD3-204ENST00000403792 GCC2Q8IWJ2 1684 aa27.78■■■□□ 2.04
SMYD3-204ENST00000403792 TMEM94Q12767 1356 aa27.76■■■□□ 2.03
SMYD3-204ENST00000403792 NAIPQ13075 1403 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms