RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 ABCC1P33527 1531 aa23.39■■□□□ 1.34
DNMT3A-205ENST00000402667 PLA2R1Q13018 1463 aa23.39■■□□□ 1.33
DNMT3A-205ENST00000402667 IQGAP3Q86VI3 1631 aa23.38■■□□□ 1.33
DNMT3A-205ENST00000402667 TRAPPC8Q9Y2L5 1435 aa23.38■■□□□ 1.33
DNMT3A-205ENST00000402667 ERBINQ96RT1 1412 aa23.37■■□□□ 1.33
DNMT3A-205ENST00000402667 POLR3GLQ9BT43 218 aa23.35■■□□□ 1.33
DNMT3A-205ENST00000402667 DHX29Q7Z478 1369 aaKnown RBP23.35■■□□□ 1.33
DNMT3A-205ENST00000402667 MRS2Q9HD23 443 aa23.34■■□□□ 1.33
DNMT3A-205ENST00000402667 MAGI2Q86UL8 1455 aa23.34■■□□□ 1.33
DNMT3A-205ENST00000402667 ARAP3Q8WWN8 1544 aa23.32■■□□□ 1.32
DNMT3A-205ENST00000402667 NEFLP07196 543 aa23.32■■□□□ 1.32
DNMT3A-205ENST00000402667 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
DNMT3A-205ENST00000402667 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
DNMT3A-205ENST00000402667 PRAG1Q86YV5 1406 aa23.31■■□□□ 1.32
DNMT3A-205ENST00000402667 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
DNMT3A-205ENST00000402667 FAM9BQ8IZU0 186 aa23.3■■□□□ 1.32
DNMT3A-205ENST00000402667 BCANQ96GW7 911 aa23.3■■□□□ 1.32
DNMT3A-205ENST00000402667 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
DNMT3A-205ENST00000402667 SPAG9O60271 1321 aaKnown RBP23.29■■□□□ 1.32
DNMT3A-205ENST00000402667 AFAP1Q8N556 730 aa23.29■■□□□ 1.32
DNMT3A-205ENST00000402667 ATP10AO60312 1499 aa23.28■■□□□ 1.32
DNMT3A-205ENST00000402667 RTEL1-TNFRSF6BF6WH68 1400 aa23.27■■□□□ 1.32
DNMT3A-205ENST00000402667 A2MP01023 1474 aa23.27■■□□□ 1.32
DNMT3A-205ENST00000402667 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
DNMT3A-205ENST00000402667 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
DNMT3A-205ENST00000402667 NBPF1Q3BBV0 1214 aa23.22■■□□□ 1.31
DNMT3A-205ENST00000402667 FANCAO15360 1455 aa23.21■■□□□ 1.31
DNMT3A-205ENST00000402667 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
DNMT3A-205ENST00000402667 GPRASP1Q5JY77 1395 aa23.2■■□□□ 1.3
DNMT3A-205ENST00000402667 ABCA9Q8IUA7 1624 aa23.2■■□□□ 1.3
DNMT3A-205ENST00000402667 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
DNMT3A-205ENST00000402667 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
DNMT3A-205ENST00000402667 E9PCH4 1651 aa23.14■■□□□ 1.3
DNMT3A-205ENST00000402667 LAMC1P11047 1609 aa23.14■■□□□ 1.29
DNMT3A-205ENST00000402667 ATP7AQ04656 1500 aa23.14■■□□□ 1.29
DNMT3A-205ENST00000402667 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
DNMT3A-205ENST00000402667 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
DNMT3A-205ENST00000402667 ADGRL1O94910 1474 aa23.13■■□□□ 1.29
DNMT3A-205ENST00000402667 EIF2AK4Q9P2K8 1649 aaKnown RBP23.13■■□□□ 1.29
DNMT3A-205ENST00000402667 DEPDC5O75140 1603 aa23.12■■□□□ 1.29
DNMT3A-205ENST00000402667 PRDM15P57071 1507 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-205ENST00000402667 TSHZ2Q9NRE2 1034 aa23.11■■□□□ 1.29
DNMT3A-205ENST00000402667 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
DNMT3A-205ENST00000402667 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
DNMT3A-205ENST00000402667 PTPRTO14522 1441 aa23.09■■□□□ 1.29
DNMT3A-205ENST00000402667 TRPM2O94759 1503 aa23.08■■□□□ 1.29
DNMT3A-205ENST00000402667 TESK2Q96S53 571 aa23.08■■□□□ 1.29
DNMT3A-205ENST00000402667 KTN1Q86UP2 1357 aaKnown RBP23.07■■□□□ 1.28
DNMT3A-205ENST00000402667 KIF3BO15066 747 aa23.07■■□□□ 1.28
DNMT3A-205ENST00000402667 KANK1Q14678 1352 aa23.06■■□□□ 1.28
DNMT3A-205ENST00000402667 PNISRQ8TF01 805 aaKnown RBP23.06■■□□□ 1.28
DNMT3A-205ENST00000402667 TET3O43151 1660 aa23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 RALBP1Q15311 655 aa23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 TMC1Q8TDI8 760 aa23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 VWDEQ8N2E2 1590 aa23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 COL17A1Q9UMD9 1497 aaPredicted RBP23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
DNMT3A-205ENST00000402667 IRX6P78412 446 aaPredicted RBP23.03■■□□□ 1.28
DNMT3A-205ENST00000402667 DISP3Q9P2K9 1392 aa23.03■■□□□ 1.28
DNMT3A-205ENST00000402667 MYBBP1AQ9BQG0 1328 aaKnown RBP23.03■■□□□ 1.28
DNMT3A-205ENST00000402667 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
DNMT3A-205ENST00000402667 CLTCL1P53675 1640 aa23.02■■□□□ 1.27
DNMT3A-205ENST00000402667 CEP152O94986 1710 aa23.01■■□□□ 1.27
DNMT3A-205ENST00000402667 BRD4O60885 1362 aaPredicted RBP23■■□□□ 1.27
DNMT3A-205ENST00000402667 MADDQ8WXG6 1647 aa23■■□□□ 1.27
DNMT3A-205ENST00000402667 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
DNMT3A-205ENST00000402667 STAC3Q96MF2 364 aa23■■□□□ 1.27
DNMT3A-205ENST00000402667 TMF1P82094 1093 aa22.99■■□□□ 1.27
DNMT3A-205ENST00000402667 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
DNMT3A-205ENST00000402667 KIDINS220Q9ULH0 1771 aa22.97■■□□□ 1.27
DNMT3A-205ENST00000402667 ERICH6BQ5W0A0 696 aa22.97■■□□□ 1.27
DNMT3A-205ENST00000402667 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
DNMT3A-205ENST00000402667 ZNF518AQ6AHZ1 1483 aa22.96■■□□□ 1.27
DNMT3A-205ENST00000402667 LRPPRCP42704 1394 aaKnown RBP22.95■■□□□ 1.27
DNMT3A-205ENST00000402667 CD109Q6YHK3 1445 aa22.94■■□□□ 1.26
DNMT3A-205ENST00000402667 SMG6Q86US8 1419 aaKnown RBP22.94■■□□□ 1.26
DNMT3A-205ENST00000402667 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
DNMT3A-205ENST00000402667 PANK3Q9H999 370 aa22.93■■□□□ 1.26
DNMT3A-205ENST00000402667 NLRP13Q86W25 1043 aa22.92■■□□□ 1.26
DNMT3A-205ENST00000402667 IQGAP1P46940 1657 aa22.91■■□□□ 1.26
DNMT3A-205ENST00000402667 NEURL4Q96JN8 1562 aa22.9■■□□□ 1.26
DNMT3A-205ENST00000402667 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
DNMT3A-205ENST00000402667 EFCAB6Q5THR3 1501 aa22.89■■□□□ 1.25
DNMT3A-205ENST00000402667 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
DNMT3A-205ENST00000402667 POGZQ7Z3K3 1410 aa22.87■■□□□ 1.25
DNMT3A-205ENST00000402667 CFAP74Q9C0B2 1584 aa22.87■■□□□ 1.25
DNMT3A-205ENST00000402667 UGGT1Q9NYU2 1555 aa22.87■■□□□ 1.25
DNMT3A-205ENST00000402667 SENP3-EIF4A1A0A087X0R7 540 aa22.87■■□□□ 1.25
DNMT3A-205ENST00000402667 CC2D1BQ5T0F9 858 aaKnown RBP22.87■■□□□ 1.25
DNMT3A-205ENST00000402667 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
DNMT3A-205ENST00000402667 LMTK2Q8IWU2 1503 aa22.86■■□□□ 1.25
DNMT3A-205ENST00000402667 PPRC1Q5VV67 1664 aaKnown RBP22.85■■□□□ 1.25
DNMT3A-205ENST00000402667 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
DNMT3A-205ENST00000402667 KIAA1210Q9ULL0 1709 aa22.83■■□□□ 1.24
DNMT3A-205ENST00000402667 KIF1BO60333 1816 aa22.82■■□□□ 1.24
DNMT3A-205ENST00000402667 MYOM2P54296 1465 aa22.81■■□□□ 1.24
DNMT3A-205ENST00000402667 CDCA8Q53HL2 280 aa22.81■■□□□ 1.24
DNMT3A-205ENST00000402667 FRMPD1Q5SYB0 1578 aa22.8■■□□□ 1.24
DNMT3A-205ENST00000402667 MAP3K4Q9Y6R4 1608 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms