RNA–Protein interactions for RNA: ENST00000402415.7

OTOF-204, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 5,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-204ENST00000402415 IL27Q8NEV9 243 aa15.2■□□□□ 0.02
OTOF-204ENST00000402415 PHLDB1Q86UU1 1377 aa15.2■□□□□ 0.02
OTOF-204ENST00000402415 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
OTOF-204ENST00000402415 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
OTOF-204ENST00000402415 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
OTOF-204ENST00000402415 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
OTOF-204ENST00000402415 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
OTOF-204ENST00000402415 RAPGEF3O95398 923 aa15.19■□□□□ 0.02
OTOF-204ENST00000402415 SKOR2Q2VWA4 1001 aaPredicted RBP15.19■□□□□ 0.02
OTOF-204ENST00000402415 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
OTOF-204ENST00000402415 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
OTOF-204ENST00000402415 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
OTOF-204ENST00000402415 APPP05067 770 aa15.16■□□□□ 0.02
OTOF-204ENST00000402415 PDE4AP27815 886 aa15.16■□□□□ 0.02
OTOF-204ENST00000402415 PPP1R1BQ9UD71 204 aaPredicted RBP15.16■□□□□ 0.02
OTOF-204ENST00000402415 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
OTOF-204ENST00000402415 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
OTOF-204ENST00000402415 GOLGA6L1Q8N7Z2 621 aa15.15■□□□□ 0.02
OTOF-204ENST00000402415 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
OTOF-204ENST00000402415 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
OTOF-204ENST00000402415 DRC7Q8IY82 874 aa15.15■□□□□ 0.02
OTOF-204ENST00000402415 MSH5O43196 834 aa15.15■□□□□ 0.02
OTOF-204ENST00000402415 KNSTRNQ9Y448 316 aa15.15■□□□□ 0.02
OTOF-204ENST00000402415 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
OTOF-204ENST00000402415 CARD11Q9BXL7 1154 aa15.13■□□□□ 0.01
OTOF-204ENST00000402415 CALD1Q05682 793 aaKnown RBP15.13■□□□□ 0.01
OTOF-204ENST00000402415 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
OTOF-204ENST00000402415 KIAA0586Q9BVV6 1533 aa15.13■□□□□ 0.01
OTOF-204ENST00000402415 CALRP27797 417 aaKnown RBP15.12■□□□□ 0.01
OTOF-204ENST00000402415 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
OTOF-204ENST00000402415 STK26Q9P289 416 aa15.12■□□□□ 0.01
OTOF-204ENST00000402415 CCDC66A2RUB6 948 aa15.11■□□□□ 0.01
OTOF-204ENST00000402415 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
OTOF-204ENST00000402415 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
OTOF-204ENST00000402415 DISP3Q9P2K9 1392 aa15.09■□□□□ 0.01
OTOF-204ENST00000402415 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
OTOF-204ENST00000402415 IGF1RP08069 1367 aa15.09■□□□□ 0.01
OTOF-204ENST00000402415 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
OTOF-204ENST00000402415 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
OTOF-204ENST00000402415 PHF14O94880 888 aa15.08■□□□□ 0
OTOF-204ENST00000402415 NFKBIBQ15653 356 aa15.08■□□□□ 0
OTOF-204ENST00000402415 HTATSF1O43719 755 aaKnown RBP15.08■□□□□ 0
OTOF-204ENST00000402415 PSME1Q06323 249 aa15.08■□□□□ 0
OTOF-204ENST00000402415 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
OTOF-204ENST00000402415 FAM161AQ3B820 660 aa15.08■□□□□ 0
OTOF-204ENST00000402415 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
OTOF-204ENST00000402415 MRE11P49959 708 aa15.07■□□□□ 0
OTOF-204ENST00000402415 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
OTOF-204ENST00000402415 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
OTOF-204ENST00000402415 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
OTOF-204ENST00000402415 FRAT1Q92837 279 aaPredicted RBP15.06■□□□□ 0
OTOF-204ENST00000402415 VGFO15240 615 aaPredicted RBP15.05■□□□□ 0
OTOF-204ENST00000402415 TMF1P82094 1093 aa15.05■□□□□ 0
OTOF-204ENST00000402415 TEX35Q5T0J7 233 aa15.05■□□□□ 0
OTOF-204ENST00000402415 PDE4CQ08493 712 aa15.05■□□□□ -0
OTOF-204ENST00000402415 PDE3BQ13370 1112 aa15.04■□□□□ -0
OTOF-204ENST00000402415 FHOD3Q2V2M9 1422 aa15.04■□□□□ -0
OTOF-204ENST00000402415 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
OTOF-204ENST00000402415 NOM1Q5C9Z4 860 aaKnown RBP15.04■□□□□ -0
OTOF-204ENST00000402415 SCAPERQ9BY12 1400 aa15.03■□□□□ -0
OTOF-204ENST00000402415 WDR62O43379 1518 aa15.03■□□□□ -0
OTOF-204ENST00000402415 HSPA2P54652 639 aa15.03■□□□□ -0
OTOF-204ENST00000402415 MCCP23508 829 aa15.03■□□□□ -0
OTOF-204ENST00000402415 NGLY1Q96IV0 654 aa15.03■□□□□ -0
OTOF-204ENST00000402415 SIN3AQ96ST3 1273 aa15.02□□□□□ -0.01
OTOF-204ENST00000402415 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
OTOF-204ENST00000402415 ARHGAP5Q13017 1502 aa15.01□□□□□ -0.01
OTOF-204ENST00000402415 GPS2Q13227 327 aa15.01□□□□□ -0.01
OTOF-204ENST00000402415 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
OTOF-204ENST00000402415 PMFBP1Q8TBY8 1022 aa15.01□□□□□ -0.01
OTOF-204ENST00000402415 CENPQQ7L2Z9 268 aaPredicted RBP15□□□□□ -0.01
OTOF-204ENST00000402415 AFAP1Q8N556 730 aa15□□□□□ -0.01
OTOF-204ENST00000402415 ZMYND15Q9H091 742 aa15□□□□□ -0.01
OTOF-204ENST00000402415 RWDD1Q9H446 243 aaPredicted RBP15□□□□□ -0.01
OTOF-204ENST00000402415 ISY1Q9ULR0 285 aaKnown RBP14.99□□□□□ -0.01
OTOF-204ENST00000402415 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
OTOF-204ENST00000402415 PKD2Q13563 968 aa14.99□□□□□ -0.01
OTOF-204ENST00000402415 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
OTOF-204ENST00000402415 SAFB2Q14151 953 aaKnown RBP eCLIP14.99□□□□□ -0.01
OTOF-204ENST00000402415 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
OTOF-204ENST00000402415 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
OTOF-204ENST00000402415 SOX12O15370 315 aa14.97□□□□□ -0.01
OTOF-204ENST00000402415 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
OTOF-204ENST00000402415 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.01
OTOF-204ENST00000402415 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
OTOF-204ENST00000402415 ARHGEF11O15085 1522 aa14.96□□□□□ -0.01
OTOF-204ENST00000402415 ASXL2Q76L83 1435 aa14.96□□□□□ -0.01
OTOF-204ENST00000402415 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.01
OTOF-204ENST00000402415 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.02
OTOF-204ENST00000402415 CHMP4AQ9BY43 222 aa14.96□□□□□ -0.02
OTOF-204ENST00000402415 UHRF1BP1Q6BDS2 1440 aa14.96□□□□□ -0.02
OTOF-204ENST00000402415 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
OTOF-204ENST00000402415 DIAPH3Q9NSV4 1193 aa14.95□□□□□ -0.02
OTOF-204ENST00000402415 FANCAO15360 1455 aa14.95□□□□□ -0.02
OTOF-204ENST00000402415 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
OTOF-204ENST00000402415 CWC15Q9P013 229 aaKnown RBP14.94□□□□□ -0.02
OTOF-204ENST00000402415 SLC4A3P48751 1232 aa14.94□□□□□ -0.02
OTOF-204ENST00000402415 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
OTOF-204ENST00000402415 CEBPAP49715 358 aaPredicted RBP14.93□□□□□ -0.02
OTOF-204ENST00000402415 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms