RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 FANCAO15360 1455 aa36.81■■■■□ 3.48
CGREF1-203ENST00000402394 SPAG9O60271 1321 aaKnown RBP36.81■■■■□ 3.48
CGREF1-203ENST00000402394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.81■■■■□ 3.48
CGREF1-203ENST00000402394 KIF7Q2M1P5 1343 aa36.8■■■■□ 3.48
CGREF1-203ENST00000402394 ATP10AO60312 1499 aa36.77■■■■□ 3.48
CGREF1-203ENST00000402394 AFAP1Q8N556 730 aa36.75■■■■□ 3.47
CGREF1-203ENST00000402394 INO80Q9ULG1 1556 aaPredicted RBP36.72■■■■□ 3.47
CGREF1-203ENST00000402394 DCAF11Q8TEB1 546 aa36.72■■■■□ 3.47
CGREF1-203ENST00000402394 BCORL1Q5H9F3 1711 aa36.71■■■■□ 3.47
CGREF1-203ENST00000402394 ATP7AQ04656 1500 aa36.69■■■■□ 3.46
CGREF1-203ENST00000402394 NPM1P06748 294 aaKnown RBP eCLIP36.68■■■■□ 3.46
CGREF1-203ENST00000402394 ADGRL1O94910 1474 aa36.68■■■■□ 3.46
CGREF1-203ENST00000402394 KDM2AQ9Y2K7 1162 aa36.67■■■■□ 3.46
CGREF1-203ENST00000402394 ARID4BQ4LE39 1312 aaPredicted RBP36.67■■■■□ 3.46
CGREF1-203ENST00000402394 DEPDC5O75140 1603 aa36.65■■■■□ 3.46
CGREF1-203ENST00000402394 CARD11Q9BXL7 1154 aa36.65■■■■□ 3.46
CGREF1-203ENST00000402394 PRAG1Q86YV5 1406 aa36.64■■■■□ 3.46
CGREF1-203ENST00000402394 SCAPERQ9BY12 1400 aa36.64■■■■□ 3.46
CGREF1-203ENST00000402394 RIMBP3CA6NJZ7 1639 aa36.62■■■■□ 3.45
CGREF1-203ENST00000402394 RIMBP3BA6NNM3 1639 aa36.62■■■■□ 3.45
CGREF1-203ENST00000402394 RIMBP3Q9UFD9 1639 aa36.62■■■■□ 3.45
CGREF1-203ENST00000402394 A2MP01023 1474 aa36.61■■■■□ 3.45
CGREF1-203ENST00000402394 TRPM1Q7Z4N2 1603 aa36.6■■■■□ 3.45
CGREF1-203ENST00000402394 PRKRIP1Q9H875 184 aaPredicted RBP36.59■■■■□ 3.45
CGREF1-203ENST00000402394 CYB5RLQ6IPT4 315 aa36.58■■■■□ 3.45
CGREF1-203ENST00000402394 E9PCH4 1651 aa36.56■■■■□ 3.44
CGREF1-203ENST00000402394 ROCK2O75116 1388 aaKnown RBP36.55■■■■□ 3.44
CGREF1-203ENST00000402394 EIF2AK4Q9P2K8 1649 aaKnown RBP36.53■■■■□ 3.44
CGREF1-203ENST00000402394 VWDEQ8N2E2 1590 aa36.52■■■■□ 3.44
CGREF1-203ENST00000402394 RGL3Q3MIN7 710 aa36.51■■■■□ 3.44
CGREF1-203ENST00000402394 GPRASP1Q5JY77 1395 aa36.5■■■■□ 3.43
CGREF1-203ENST00000402394 TET3O43151 1660 aa36.5■■■■□ 3.43
CGREF1-203ENST00000402394 DHX29Q7Z478 1369 aaKnown RBP36.49■■■■□ 3.43
CGREF1-203ENST00000402394 TRPM2O94759 1503 aa36.49■■■■□ 3.43
CGREF1-203ENST00000402394 LAMC1P11047 1609 aa36.48■■■■□ 3.43
CGREF1-203ENST00000402394 CFAP74Q9C0B2 1584 aa36.47■■■■□ 3.43
CGREF1-203ENST00000402394 PTPRTO14522 1441 aa36.47■■■■□ 3.43
CGREF1-203ENST00000402394 ST20-MTHFSA0A0A6YYL1 179 aa36.46■■■■□ 3.43
CGREF1-203ENST00000402394 ZNF518AQ6AHZ1 1483 aa36.46■■■■□ 3.43
CGREF1-203ENST00000402394 KANK1Q14678 1352 aa36.44■■■■□ 3.42
CGREF1-203ENST00000402394 KIDINS220Q9ULH0 1771 aa36.44■■■■□ 3.42
CGREF1-203ENST00000402394 PRDM15P57071 1507 aaPredicted RBP36.44■■■■□ 3.42
CGREF1-203ENST00000402394 CD109Q6YHK3 1445 aa36.43■■■■□ 3.42
CGREF1-203ENST00000402394 SPHKAPQ2M3C7 1700 aa36.43■■■■□ 3.42
CGREF1-203ENST00000402394 SUPT16HQ9Y5B9 1047 aaKnown RBP36.43■■■■□ 3.42
CGREF1-203ENST00000402394 MROH1Q8NDA8 1641 aa36.41■■■■□ 3.42
CGREF1-203ENST00000402394 CCDC184Q52MB2 194 aa36.39■■■■□ 3.42
CGREF1-203ENST00000402394 KIF3BO15066 747 aa36.38■■■■□ 3.41
CGREF1-203ENST00000402394 MYT1LQ9UL68 1186 aa36.38■■■■□ 3.41
CGREF1-203ENST00000402394 CEP152O94986 1710 aa36.36■■■■□ 3.41
CGREF1-203ENST00000402394 NBPF1Q3BBV0 1214 aa36.36■■■■□ 3.41
CGREF1-203ENST00000402394 POLR3GLQ9BT43 218 aa36.36■■■■□ 3.41
CGREF1-203ENST00000402394 POGZQ7Z3K3 1410 aa36.35■■■■□ 3.41
CGREF1-203ENST00000402394 CLTCL1P53675 1640 aa36.34■■■■□ 3.41
CGREF1-203ENST00000402394 HNRNPUQ00839 825 aaKnown RBP eCLIP36.32■■■■□ 3.4
CGREF1-203ENST00000402394 RNF17Q9BXT8 1623 aaKnown RBP36.31■■■■□ 3.4
CGREF1-203ENST00000402394 MRS2Q9HD23 443 aa36.31■■■■□ 3.4
CGREF1-203ENST00000402394 MLH3Q9UHC1 1453 aa36.29■■■■□ 3.4
CGREF1-203ENST00000402394 MADDQ8WXG6 1647 aa36.27■■■■□ 3.4
CGREF1-203ENST00000402394 NEURL4Q96JN8 1562 aa36.27■■■■□ 3.4
CGREF1-203ENST00000402394 STAC3Q96MF2 364 aa36.26■■■■□ 3.4
CGREF1-203ENST00000402394 LMTK2Q8IWU2 1503 aa36.25■■■■□ 3.39
CGREF1-203ENST00000402394 EFCAB6Q5THR3 1501 aa36.24■■■■□ 3.39
CGREF1-203ENST00000402394 PELP1Q8IZL8 1130 aaKnown RBP36.24■■■■□ 3.39
CGREF1-203ENST00000402394 NEO1Q92859 1461 aa36.24■■■■□ 3.39
CGREF1-203ENST00000402394 HECW2Q9P2P5 1572 aa36.23■■■■□ 3.39
CGREF1-203ENST00000402394 COL17A1Q9UMD9 1497 aaPredicted RBP36.2■■■■□ 3.39
CGREF1-203ENST00000402394 FRMPD1Q5SYB0 1578 aa36.19■■■■□ 3.38
CGREF1-203ENST00000402394 TESK2Q96S53 571 aa36.18■■■■□ 3.38
CGREF1-203ENST00000402394 PPRC1Q5VV67 1664 aaKnown RBP36.17■■■■□ 3.38
CGREF1-203ENST00000402394 FAM9BQ8IZU0 186 aa36.15■■■■□ 3.38
CGREF1-203ENST00000402394 KTN1Q86UP2 1357 aaKnown RBP36.13■■■■□ 3.37
CGREF1-203ENST00000402394 ABCA6Q8N139 1617 aa36.11■■■■□ 3.37
CGREF1-203ENST00000402394 IQGAP1P46940 1657 aa36.1■■■■□ 3.37
CGREF1-203ENST00000402394 DISP3Q9P2K9 1392 aa36.09■■■■□ 3.37
CGREF1-203ENST00000402394 MAP3K4Q9Y6R4 1608 aa36.08■■■■□ 3.37
CGREF1-203ENST00000402394 UGGT1Q9NYU2 1555 aa36.07■■■■□ 3.36
CGREF1-203ENST00000402394 FKBP8Q14318 412 aa36.06■■■■□ 3.36
CGREF1-203ENST00000402394 KIAA1210Q9ULL0 1709 aa36.06■■■■□ 3.36
CGREF1-203ENST00000402394 KIF1BO60333 1816 aa36.05■■■■□ 3.36
CGREF1-203ENST00000402394 ZBED9Q6R2W3 1325 aa36.04■■■■□ 3.36
CGREF1-203ENST00000402394 MYOM2P54296 1465 aa36.04■■■■□ 3.36
CGREF1-203ENST00000402394 NEFLP07196 543 aa36.04■■■■□ 3.36
CGREF1-203ENST00000402394 RALBP1Q15311 655 aa36.03■■■■□ 3.36
CGREF1-203ENST00000402394 GLI2P10070 1586 aa36.03■■■■□ 3.36
CGREF1-203ENST00000402394 TMF1P82094 1093 aa36.02■■■■□ 3.36
CGREF1-203ENST00000402394 SCAF11Q99590 1463 aaKnown RBP36.01■■■■□ 3.36
CGREF1-203ENST00000402394 CNGB1Q14028 1251 aaPredicted RBP36■■■■□ 3.35
CGREF1-203ENST00000402394 RICTORQ6R327 1708 aa35.98■■■■□ 3.35
CGREF1-203ENST00000402394 RAPGEF3O95398 923 aa35.98■■■■□ 3.35
CGREF1-203ENST00000402394 IFT172Q9UG01 1749 aa35.98■■■■□ 3.35
CGREF1-203ENST00000402394 DIP2CQ9Y2E4 1556 aa35.97■■■■□ 3.35
CGREF1-203ENST00000402394 NPATQ14207 1427 aa35.97■■■■□ 3.35
CGREF1-203ENST00000402394 MYBBP1AQ9BQG0 1328 aaKnown RBP35.97■■■■□ 3.35
CGREF1-203ENST00000402394 PER1O15534 1290 aaPredicted RBP35.96■■■■□ 3.35
CGREF1-203ENST00000402394 ABCC3O15438 1527 aa35.96■■■■□ 3.35
CGREF1-203ENST00000402394 MROH2AA6NES4 1674 aa35.95■■■■□ 3.35
CGREF1-203ENST00000402394 FAM69CQ0P6D2 419 aa35.95■■■■□ 3.35
CGREF1-203ENST00000402394 BRD4O60885 1362 aaPredicted RBP35.95■■■■□ 3.35
CGREF1-203ENST00000402394 ADGRB3O60242 1522 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms