RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.04
PRAMEF1-202ENST00000400814 EPRSP07814 1512 aaKnown RBP14.77□□□□□ -0.04
PRAMEF1-202ENST00000400814 NUP153P49790 1475 aaKnown RBP14.76□□□□□ -0.05
PRAMEF1-202ENST00000400814 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
PRAMEF1-202ENST00000400814 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
PRAMEF1-202ENST00000400814 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
PRAMEF1-202ENST00000400814 PDE4AP27815 886 aa14.71□□□□□ -0.05
PRAMEF1-202ENST00000400814 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
PRAMEF1-202ENST00000400814 LARP6Q9BRS8 491 aaKnown RBP14.71□□□□□ -0.05
PRAMEF1-202ENST00000400814 UHRF1BP1LA0JNW5 1464 aa14.71□□□□□ -0.06
PRAMEF1-202ENST00000400814 SLC24A3Q9HC58 644 aa14.7□□□□□ -0.06
PRAMEF1-202ENST00000400814 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
PRAMEF1-202ENST00000400814 ATP10BO94823 1461 aa14.7□□□□□ -0.06
PRAMEF1-202ENST00000400814 MFSD10Q14728 455 aa14.68□□□□□ -0.06
PRAMEF1-202ENST00000400814 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
PRAMEF1-202ENST00000400814 NEUROD2Q15784 382 aa14.67□□□□□ -0.06
PRAMEF1-202ENST00000400814 CDK11AQ9UQ88 783 aaPredicted RBP14.67□□□□□ -0.06
PRAMEF1-202ENST00000400814 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
PRAMEF1-202ENST00000400814 ABCC2Q92887 1545 aa14.67□□□□□ -0.06
PRAMEF1-202ENST00000400814 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
PRAMEF1-202ENST00000400814 MS4A4AQ96JQ5 239 aa14.66□□□□□ -0.06
PRAMEF1-202ENST00000400814 PCGF6Q9BYE7 350 aa14.66□□□□□ -0.06
PRAMEF1-202ENST00000400814 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
PRAMEF1-202ENST00000400814 ARID3CA6NKF2 412 aa14.66□□□□□ -0.06
PRAMEF1-202ENST00000400814 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
PRAMEF1-202ENST00000400814 ARIH1Q9Y4X5 557 aaPredicted RBP14.65□□□□□ -0.06
PRAMEF1-202ENST00000400814 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
PRAMEF1-202ENST00000400814 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
PRAMEF1-202ENST00000400814 ZMYND10O75800 440 aa14.63□□□□□ -0.07
PRAMEF1-202ENST00000400814 ARXQ96QS3 562 aa14.63□□□□□ -0.07
PRAMEF1-202ENST00000400814 KDM5BQ9UGL1 1544 aa14.63□□□□□ -0.07
PRAMEF1-202ENST00000400814 TROQ12816 1431 aaPredicted RBP14.62□□□□□ -0.07
PRAMEF1-202ENST00000400814 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
PRAMEF1-202ENST00000400814 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
PRAMEF1-202ENST00000400814 RRBP1Q9P2E9 1410 aaKnown RBP14.61□□□□□ -0.07
PRAMEF1-202ENST00000400814 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
PRAMEF1-202ENST00000400814 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
PRAMEF1-202ENST00000400814 ADCY10Q96PN6 1610 aa14.59□□□□□ -0.07
PRAMEF1-202ENST00000400814 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
PRAMEF1-202ENST00000400814 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.08
PRAMEF1-202ENST00000400814 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.08
PRAMEF1-202ENST00000400814 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.08
PRAMEF1-202ENST00000400814 CAMK2BQ13554 666 aa14.58□□□□□ -0.08
PRAMEF1-202ENST00000400814 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
PRAMEF1-202ENST00000400814 GOLGA2Q08379 1002 aa14.56□□□□□ -0.08
PRAMEF1-202ENST00000400814 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
PRAMEF1-202ENST00000400814 CCNB3Q8WWL7 1395 aa14.55□□□□□ -0.08
PRAMEF1-202ENST00000400814 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
PRAMEF1-202ENST00000400814 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
PRAMEF1-202ENST00000400814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRAMEF1-202ENST00000400814 BARGINQ6ZT62 677 aa14.53□□□□□ -0.08
PRAMEF1-202ENST00000400814 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.08
PRAMEF1-202ENST00000400814 TMEM106CQ9BVX2 250 aa14.52□□□□□ -0.08
PRAMEF1-202ENST00000400814 MIA2Q96PC5 1412 aa14.52□□□□□ -0.09
PRAMEF1-202ENST00000400814 ABCC10Q5T3U5 1492 aa14.51□□□□□ -0.09
PRAMEF1-202ENST00000400814 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
PRAMEF1-202ENST00000400814 KIF14Q15058 1648 aa14.5□□□□□ -0.09
PRAMEF1-202ENST00000400814 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
PRAMEF1-202ENST00000400814 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
PRAMEF1-202ENST00000400814 MKRN3Q13064 507 aaKnown RBP14.48□□□□□ -0.09
PRAMEF1-202ENST00000400814 GPATCH8Q9UKJ3 1502 aaKnown RBP14.48□□□□□ -0.09
PRAMEF1-202ENST00000400814 TCOF1Q13428 1488 aaKnown RBP14.47□□□□□ -0.09
PRAMEF1-202ENST00000400814 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.1
PRAMEF1-202ENST00000400814 ASXL2Q76L83 1435 aa14.46□□□□□ -0.1
PRAMEF1-202ENST00000400814 KCNH8Q96L42 1107 aa14.45□□□□□ -0.1
PRAMEF1-202ENST00000400814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRAMEF1-202ENST00000400814 MLLT3P42568 568 aaPredicted RBP14.44□□□□□ -0.1
PRAMEF1-202ENST00000400814 FAM50AQ14320 339 aaKnown RBP14.44□□□□□ -0.1
PRAMEF1-202ENST00000400814 RBM26Q5T8P6 1007 aaKnown RBP14.44□□□□□ -0.1
PRAMEF1-202ENST00000400814 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
PRAMEF1-202ENST00000400814 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
PRAMEF1-202ENST00000400814 AK7Q96M32 723 aa14.43□□□□□ -0.1
PRAMEF1-202ENST00000400814 CFDP1Q9UEE9 299 aaPredicted RBP14.43□□□□□ -0.1
PRAMEF1-202ENST00000400814 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
PRAMEF1-202ENST00000400814 PPP1R15BQ5SWA1 713 aa14.42□□□□□ -0.1
PRAMEF1-202ENST00000400814 CDC42BPAQ5VT25 1732 aa14.42□□□□□ -0.1
PRAMEF1-202ENST00000400814 GPIHBP1Q8IV16 184 aa14.41□□□□□ -0.1
PRAMEF1-202ENST00000400814 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
PRAMEF1-202ENST00000400814 MAPKBP1O60336 1514 aa14.4□□□□□ -0.1
PRAMEF1-202ENST00000400814 PLCH2O75038 1416 aa14.4□□□□□ -0.1
PRAMEF1-202ENST00000400814 TTC37Q6PGP7 1564 aa14.4□□□□□ -0.1
PRAMEF1-202ENST00000400814 MS4A3Q96HJ5 214 aa14.4□□□□□ -0.1
PRAMEF1-202ENST00000400814 ZNF644Q9H582 1327 aaPredicted RBP14.39□□□□□ -0.11
PRAMEF1-202ENST00000400814 CDC42BPBQ9Y5S2 1711 aa14.39□□□□□ -0.11
PRAMEF1-202ENST00000400814 HOMEZQ8IX15 550 aa14.38□□□□□ -0.11
PRAMEF1-202ENST00000400814 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
PRAMEF1-202ENST00000400814 PREX2Q70Z35 1606 aa14.38□□□□□ -0.11
PRAMEF1-202ENST00000400814 ABCA9Q8IUA7 1624 aa14.38□□□□□ -0.11
PRAMEF1-202ENST00000400814 ITGAEP38570 1179 aa14.37□□□□□ -0.11
PRAMEF1-202ENST00000400814 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
PRAMEF1-202ENST00000400814 PTPRKQ15262 1439 aa14.36□□□□□ -0.11
PRAMEF1-202ENST00000400814 ARAP3Q8WWN8 1544 aa14.36□□□□□ -0.11
PRAMEF1-202ENST00000400814 CAMSAP2Q08AD1 1489 aa14.36□□□□□ -0.11
PRAMEF1-202ENST00000400814 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
PRAMEF1-202ENST00000400814 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
PRAMEF1-202ENST00000400814 EFCAB2Q5VUJ9 269 aa14.34□□□□□ -0.11
PRAMEF1-202ENST00000400814 GPBP1L1Q9HC44 474 aaPredicted RBP14.34□□□□□ -0.11
PRAMEF1-202ENST00000400814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRAMEF1-202ENST00000400814 TIE1P35590 1138 aa14.33□□□□□ -0.12
PRAMEF1-202ENST00000400814 DAXXQ9UER7 740 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms