RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
PDGFA-202ENST00000400761 FYCO1Q9BQS8 1478 aa27.84■■■□□ 2.05
PDGFA-202ENST00000400761 CFDP1Q9UEE9 299 aaPredicted RBP27.84■■■□□ 2.05
PDGFA-202ENST00000400761 VWDEQ8N2E2 1590 aa27.83■■■□□ 2.05
PDGFA-202ENST00000400761 TNRQ92752 1358 aa27.81■■■□□ 2.04
PDGFA-202ENST00000400761 FBXO31Q5XUX0 539 aaPredicted RBP27.78■■■□□ 2.04
PDGFA-202ENST00000400761 ANKLE2Q86XL3 938 aa27.78■■■□□ 2.04
PDGFA-202ENST00000400761 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
PDGFA-202ENST00000400761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.75■■■□□ 2.03
PDGFA-202ENST00000400761 PZPP20742 1482 aa27.75■■■□□ 2.03
PDGFA-202ENST00000400761 MED14O60244 1454 aa27.74■■■□□ 2.03
PDGFA-202ENST00000400761 DHX29Q7Z478 1369 aaKnown RBP27.73■■■□□ 2.03
PDGFA-202ENST00000400761 DEPDC5O75140 1603 aa27.72■■■□□ 2.03
PDGFA-202ENST00000400761 NPHP4O75161 1426 aaPredicted RBP27.72■■■□□ 2.03
PDGFA-202ENST00000400761 RTEL1-TNFRSF6BF6WH68 1400 aa27.71■■■□□ 2.03
PDGFA-202ENST00000400761 THEMISQ8N1K5 641 aaPredicted RBP27.71■■■□□ 2.03
PDGFA-202ENST00000400761 KDM5DQ9BY66 1539 aa27.71■■■□□ 2.03
PDGFA-202ENST00000400761 FAM135AQ9P2D6 1515 aa27.7■■■□□ 2.02
PDGFA-202ENST00000400761 MBD5Q9P267 1494 aa27.7■■■□□ 2.02
PDGFA-202ENST00000400761 ZNF644Q9H582 1327 aaPredicted RBP27.68■■■□□ 2.02
PDGFA-202ENST00000400761 NLRP1Q9C000 1473 aa27.68■■■□□ 2.02
PDGFA-202ENST00000400761 UGGT1Q9NYU2 1555 aa27.68■■■□□ 2.02
PDGFA-202ENST00000400761 STRCP1A6NGW2 1772 aa27.67■■■□□ 2.02
PDGFA-202ENST00000400761 MIA2Q96PC5 1412 aa27.67■■■□□ 2.02
PDGFA-202ENST00000400761 IQGAP1P46940 1657 aa27.66■■■□□ 2.02
PDGFA-202ENST00000400761 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
PDGFA-202ENST00000400761 LRRC7Q96NW7 1537 aa27.66■■■□□ 2.02
PDGFA-202ENST00000400761 KIF3BO15066 747 aa27.65■■■□□ 2.02
PDGFA-202ENST00000400761 RNF17Q9BXT8 1623 aaKnown RBP27.65■■■□□ 2.02
PDGFA-202ENST00000400761 RGS17Q9UGC6 210 aaPredicted RBP27.63■■■□□ 2.01
PDGFA-202ENST00000400761 TIAM1Q13009 1591 aa27.63■■■□□ 2.01
PDGFA-202ENST00000400761 WASHC2CQ9Y4E1 1318 aa27.63■■■□□ 2.01
PDGFA-202ENST00000400761 SYNMO15061 1565 aa27.62■■■□□ 2.01
PDGFA-202ENST00000400761 MTUS2Q5JR59 1369 aa27.61■■■□□ 2.01
PDGFA-202ENST00000400761 VPS8Q8N3P4 1428 aa27.57■■■□□ 2
PDGFA-202ENST00000400761 CCDC141Q6ZP82 1450 aa27.52■■■□□ 2
PDGFA-202ENST00000400761 ZC3H13Q5T200 1668 aaKnown RBP27.51■■□□□ 1.99
PDGFA-202ENST00000400761 EHBP1L1Q8N3D4 1523 aa27.49■■□□□ 1.99
PDGFA-202ENST00000400761 XIRP1Q702N8 1843 aaKnown RBP27.45■■□□□ 1.98
PDGFA-202ENST00000400761 RSPH4AQ5TD94 716 aa27.44■■□□□ 1.98
PDGFA-202ENST00000400761 CAMSAP2Q08AD1 1489 aa27.44■■□□□ 1.98
PDGFA-202ENST00000400761 POTEAQ6S8J7 498 aa27.43■■□□□ 1.98
PDGFA-202ENST00000400761 ABCC3O15438 1527 aa27.42■■□□□ 1.98
PDGFA-202ENST00000400761 ERVK-7P63135 1459 aa27.41■■□□□ 1.98
PDGFA-202ENST00000400761 UBR1Q8IWV7 1749 aa27.41■■□□□ 1.98
PDGFA-202ENST00000400761 SCAF11Q99590 1463 aaKnown RBP27.4■■□□□ 1.98
PDGFA-202ENST00000400761 FAM135BQ49AJ0 1406 aa27.38■■□□□ 1.97
PDGFA-202ENST00000400761 ARHGEF5Q12774 1597 aa27.36■■□□□ 1.97
PDGFA-202ENST00000400761 NCOA2Q15596 1464 aa27.35■■□□□ 1.97
PDGFA-202ENST00000400761 CFAP65Q6ZU64 1925 aaKnown RBP27.35■■□□□ 1.97
PDGFA-202ENST00000400761 ARHGAP23Q9P227 1491 aa27.34■■□□□ 1.97
PDGFA-202ENST00000400761 LTKP29376 864 aa27.34■■□□□ 1.97
PDGFA-202ENST00000400761 TSPY4P0CV99 314 aa27.33■■□□□ 1.97
PDGFA-202ENST00000400761 TSPY10P0CW01 314 aa27.33■■□□□ 1.97
PDGFA-202ENST00000400761 SLIT1O75093 1534 aa27.32■■□□□ 1.96
PDGFA-202ENST00000400761 TXNDC2Q86VQ3 553 aa27.31■■□□□ 1.96
PDGFA-202ENST00000400761 MROH1Q8NDA8 1641 aa27.3■■□□□ 1.96
PDGFA-202ENST00000400761 EIF2AK4Q9P2K8 1649 aaKnown RBP27.29■■□□□ 1.96
PDGFA-202ENST00000400761 CEP152O94986 1710 aa27.29■■□□□ 1.96
PDGFA-202ENST00000400761 SETD1AO15047 1707 aaKnown RBP27.27■■□□□ 1.96
PDGFA-202ENST00000400761 ROBO1Q9Y6N7 1651 aa27.26■■□□□ 1.95
PDGFA-202ENST00000400761 MAST1Q9Y2H9 1570 aa27.25■■□□□ 1.95
PDGFA-202ENST00000400761 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
PDGFA-202ENST00000400761 TMEM94Q12767 1356 aa27.23■■□□□ 1.95
PDGFA-202ENST00000400761 EID1Q9Y6B2 187 aa27.23■■□□□ 1.95
PDGFA-202ENST00000400761 APLP2Q06481 763 aa27.21■■□□□ 1.95
PDGFA-202ENST00000400761 ARHGAP31Q2M1Z3 1444 aa27.17■■□□□ 1.94
PDGFA-202ENST00000400761 TMEM2Q9UHN6 1383 aa27.17■■□□□ 1.94
PDGFA-202ENST00000400761 LRRC9Q6ZRR7 1453 aa27.17■■□□□ 1.94
PDGFA-202ENST00000400761 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
PDGFA-202ENST00000400761 KCNA6P17658 529 aa27.16■■□□□ 1.94
PDGFA-202ENST00000400761 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
PDGFA-202ENST00000400761 PROSER2Q86WR7 435 aaPredicted RBP27.12■■□□□ 1.93
PDGFA-202ENST00000400761 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
PDGFA-202ENST00000400761 PHLPP1O60346 1717 aa27.11■■□□□ 1.93
PDGFA-202ENST00000400761 RBM33Q96EV2 1170 aaKnown RBP27.11■■□□□ 1.93
PDGFA-202ENST00000400761 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
PDGFA-202ENST00000400761 TET3O43151 1660 aa27.1■■□□□ 1.93
PDGFA-202ENST00000400761 JCADQ9P266 1359 aa27.09■■□□□ 1.93
PDGFA-202ENST00000400761 KDM5AP29375 1690 aaKnown RBP27.09■■□□□ 1.93
PDGFA-202ENST00000400761 NKTRP30414 1462 aaKnown RBP27.07■■□□□ 1.92
PDGFA-202ENST00000400761 SLC26A8Q96RN1 970 aa27.07■■□□□ 1.92
PDGFA-202ENST00000400761 STAG3Q9UJ98 1225 aa27.07■■□□□ 1.92
PDGFA-202ENST00000400761 EFCAB6Q5THR3 1501 aa27.06■■□□□ 1.92
PDGFA-202ENST00000400761 NWD1Q149M9 1564 aa27.06■■□□□ 1.92
PDGFA-202ENST00000400761 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
PDGFA-202ENST00000400761 MSH6P52701 1360 aa27.05■■□□□ 1.92
PDGFA-202ENST00000400761 SLAIN2Q9P270 581 aa27.04■■□□□ 1.92
PDGFA-202ENST00000400761 COL16A1Q07092 1604 aaPredicted RBP27.01■■□□□ 1.91
PDGFA-202ENST00000400761 IDI1Q13907 227 aa27■■□□□ 1.91
PDGFA-202ENST00000400761 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
PDGFA-202ENST00000400761 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
PDGFA-202ENST00000400761 KIF15Q9NS87 1388 aa26.98■■□□□ 1.91
PDGFA-202ENST00000400761 LRP6O75581 1613 aa26.98■■□□□ 1.91
PDGFA-202ENST00000400761 MYOM3Q5VTT5 1437 aa26.98■■□□□ 1.91
PDGFA-202ENST00000400761 ZNF772Q68DY9 489 aaPredicted RBP26.96■■□□□ 1.91
PDGFA-202ENST00000400761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.96■■□□□ 1.91
PDGFA-202ENST00000400761 SPATA31A6Q5VVP1 1343 aa26.95■■□□□ 1.91
PDGFA-202ENST00000400761 TRIM52Q96A61 297 aa26.95■■□□□ 1.9
PDGFA-202ENST00000400761 FGD6Q6ZV73 1430 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms