RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
LINC00649-202ENST00000400353 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
LINC00649-202ENST00000400353 KDM5CP41229 1560 aa14.9□□□□□ -0.02
LINC00649-202ENST00000400353 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
LINC00649-202ENST00000400353 USP47Q96K76 1375 aa14.89□□□□□ -0.03
LINC00649-202ENST00000400353 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
LINC00649-202ENST00000400353 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
LINC00649-202ENST00000400353 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
LINC00649-202ENST00000400353 EIF5BO60841 1220 aaKnown RBP14.88□□□□□ -0.03
LINC00649-202ENST00000400353 ATP10AO60312 1499 aa14.87□□□□□ -0.03
LINC00649-202ENST00000400353 C11orf95C9JLR9 678 aaPredicted RBP14.86□□□□□ -0.03
LINC00649-202ENST00000400353 ROCK2O75116 1388 aaKnown RBP14.86□□□□□ -0.03
LINC00649-202ENST00000400353 ABCA9Q8IUA7 1624 aa14.86□□□□□ -0.03
LINC00649-202ENST00000400353 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
LINC00649-202ENST00000400353 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
LINC00649-202ENST00000400353 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
LINC00649-202ENST00000400353 TRAPPC8Q9Y2L5 1435 aa14.84□□□□□ -0.03
LINC00649-202ENST00000400353 PRKRIP1Q9H875 184 aaPredicted RBP14.83□□□□□ -0.04
LINC00649-202ENST00000400353 ZFYVE16Q7Z3T8 1539 aa14.83□□□□□ -0.04
LINC00649-202ENST00000400353 SPAG9O60271 1321 aaKnown RBP14.82□□□□□ -0.04
LINC00649-202ENST00000400353 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
LINC00649-202ENST00000400353 LAMC1P11047 1609 aa14.82□□□□□ -0.04
LINC00649-202ENST00000400353 BCORL1Q5H9F3 1711 aa14.81□□□□□ -0.04
LINC00649-202ENST00000400353 PLA2R1Q13018 1463 aa14.81□□□□□ -0.04
LINC00649-202ENST00000400353 PRAG1Q86YV5 1406 aa14.81□□□□□ -0.04
LINC00649-202ENST00000400353 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
LINC00649-202ENST00000400353 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
LINC00649-202ENST00000400353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00649-202ENST00000400353 TRPM1Q7Z4N2 1603 aa14.8□□□□□ -0.04
LINC00649-202ENST00000400353 FANCAO15360 1455 aa14.8□□□□□ -0.04
LINC00649-202ENST00000400353 INO80Q9ULG1 1556 aaPredicted RBP14.79□□□□□ -0.04
LINC00649-202ENST00000400353 DEPDC5O75140 1603 aa14.79□□□□□ -0.04
LINC00649-202ENST00000400353 ATP7AQ04656 1500 aa14.77□□□□□ -0.04
LINC00649-202ENST00000400353 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.04
LINC00649-202ENST00000400353 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
LINC00649-202ENST00000400353 A2MP01023 1474 aa14.77□□□□□ -0.04
LINC00649-202ENST00000400353 NEFLP07196 543 aa14.77□□□□□ -0.05
LINC00649-202ENST00000400353 DHX29Q7Z478 1369 aaKnown RBP14.76□□□□□ -0.05
LINC00649-202ENST00000400353 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
LINC00649-202ENST00000400353 CFAP74Q9C0B2 1584 aa14.75□□□□□ -0.05
LINC00649-202ENST00000400353 KANK1Q14678 1352 aa14.75□□□□□ -0.05
LINC00649-202ENST00000400353 TET3O43151 1660 aa14.74□□□□□ -0.05
LINC00649-202ENST00000400353 HNRNPUQ00839 825 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00649-202ENST00000400353 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
LINC00649-202ENST00000400353 TRPM2O94759 1503 aa14.74□□□□□ -0.05
LINC00649-202ENST00000400353 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
LINC00649-202ENST00000400353 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
LINC00649-202ENST00000400353 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
LINC00649-202ENST00000400353 E9PCH4 1651 aa14.72□□□□□ -0.05
LINC00649-202ENST00000400353 PRDM15P57071 1507 aaPredicted RBP14.72□□□□□ -0.05
LINC00649-202ENST00000400353 SCAPERQ9BY12 1400 aa14.72□□□□□ -0.05
LINC00649-202ENST00000400353 AFAP1Q8N556 730 aa14.72□□□□□ -0.05
LINC00649-202ENST00000400353 PTPRTO14522 1441 aa14.72□□□□□ -0.05
LINC00649-202ENST00000400353 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
LINC00649-202ENST00000400353 NEURL4Q96JN8 1562 aa14.71□□□□□ -0.05
LINC00649-202ENST00000400353 SPHKAPQ2M3C7 1700 aa14.71□□□□□ -0.06
LINC00649-202ENST00000400353 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
LINC00649-202ENST00000400353 CEP152O94986 1710 aa14.69□□□□□ -0.06
LINC00649-202ENST00000400353 FAM69CQ0P6D2 419 aa14.69□□□□□ -0.06
LINC00649-202ENST00000400353 RGL3Q3MIN7 710 aa14.69□□□□□ -0.06
LINC00649-202ENST00000400353 ZNF518AQ6AHZ1 1483 aa14.69□□□□□ -0.06
LINC00649-202ENST00000400353 FKBP8Q14318 412 aa14.68□□□□□ -0.06
LINC00649-202ENST00000400353 POLR3GLQ9BT43 218 aa14.68□□□□□ -0.06
LINC00649-202ENST00000400353 ZBED9Q6R2W3 1325 aa14.67□□□□□ -0.06
LINC00649-202ENST00000400353 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
LINC00649-202ENST00000400353 CD109Q6YHK3 1445 aa14.66□□□□□ -0.06
LINC00649-202ENST00000400353 COL17A1Q9UMD9 1497 aaPredicted RBP14.66□□□□□ -0.06
LINC00649-202ENST00000400353 MADDQ8WXG6 1647 aa14.65□□□□□ -0.06
LINC00649-202ENST00000400353 RALBP1Q15311 655 aa14.65□□□□□ -0.06
LINC00649-202ENST00000400353 CLTCL1P53675 1640 aa14.65□□□□□ -0.06
LINC00649-202ENST00000400353 MROH1Q8NDA8 1641 aa14.65□□□□□ -0.06
LINC00649-202ENST00000400353 LMTK2Q8IWU2 1503 aa14.65□□□□□ -0.06
LINC00649-202ENST00000400353 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
LINC00649-202ENST00000400353 KIDINS220Q9ULH0 1771 aa14.64□□□□□ -0.07
LINC00649-202ENST00000400353 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
LINC00649-202ENST00000400353 KIF3BO15066 747 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 DIP2BQ9P265 1576 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 POGZQ7Z3K3 1410 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 MLH3Q9UHC1 1453 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 WASHC2CQ9Y4E1 1318 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 KIAA1210Q9ULL0 1709 aa14.62□□□□□ -0.07
LINC00649-202ENST00000400353 BRD4O60885 1362 aaPredicted RBP14.61□□□□□ -0.07
LINC00649-202ENST00000400353 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
LINC00649-202ENST00000400353 MYBBP1AQ9BQG0 1328 aaKnown RBP14.61□□□□□ -0.07
LINC00649-202ENST00000400353 IQGAP1P46940 1657 aa14.6□□□□□ -0.07
LINC00649-202ENST00000400353 NEO1Q92859 1461 aa14.6□□□□□ -0.07
LINC00649-202ENST00000400353 TMF1P82094 1093 aa14.6□□□□□ -0.07
LINC00649-202ENST00000400353 HECW2Q9P2P5 1572 aa14.59□□□□□ -0.07
LINC00649-202ENST00000400353 TESK2Q96S53 571 aa14.59□□□□□ -0.07
LINC00649-202ENST00000400353 MYOM2P54296 1465 aa14.59□□□□□ -0.07
LINC00649-202ENST00000400353 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
LINC00649-202ENST00000400353 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
LINC00649-202ENST00000400353 GLI2P10070 1586 aa14.57□□□□□ -0.08
LINC00649-202ENST00000400353 TMC1Q8TDI8 760 aa14.57□□□□□ -0.08
LINC00649-202ENST00000400353 MAP3K4Q9Y6R4 1608 aa14.56□□□□□ -0.08
LINC00649-202ENST00000400353 EIF3AQ14152 1382 aaKnown RBP14.56□□□□□ -0.08
LINC00649-202ENST00000400353 PARD3Q8TEW0 1356 aa14.56□□□□□ -0.08
LINC00649-202ENST00000400353 KIF1BO60333 1816 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms