RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 TCERG1O14776 1098 aaKnown RBP17.78■□□□□ 0.44
RPGRIP1-202ENST00000400017 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
RPGRIP1-202ENST00000400017 TMF1P82094 1093 aa17.77■□□□□ 0.44
RPGRIP1-202ENST00000400017 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
RPGRIP1-202ENST00000400017 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
RPGRIP1-202ENST00000400017 DISP1Q96F81 1524 aa17.76■□□□□ 0.43
RPGRIP1-202ENST00000400017 CRBNQ96SW2 442 aa17.76■□□□□ 0.43
RPGRIP1-202ENST00000400017 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
RPGRIP1-202ENST00000400017 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
RPGRIP1-202ENST00000400017 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
RPGRIP1-202ENST00000400017 RAPGEF6Q8TEU7 1601 aa17.73■□□□□ 0.43
RPGRIP1-202ENST00000400017 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
RPGRIP1-202ENST00000400017 RGS3P49796 1198 aa17.73■□□□□ 0.43
RPGRIP1-202ENST00000400017 PDE3BQ13370 1112 aa17.73■□□□□ 0.43
RPGRIP1-202ENST00000400017 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
RPGRIP1-202ENST00000400017 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
RPGRIP1-202ENST00000400017 SLC4A3P48751 1232 aa17.7■□□□□ 0.42
RPGRIP1-202ENST00000400017 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
RPGRIP1-202ENST00000400017 RNF123Q5XPI4 1314 aa17.68■□□□□ 0.42
RPGRIP1-202ENST00000400017 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
RPGRIP1-202ENST00000400017 BCORL1Q5H9F3 1711 aa17.66■□□□□ 0.42
RPGRIP1-202ENST00000400017 KIF14Q15058 1648 aa17.66■□□□□ 0.42
RPGRIP1-202ENST00000400017 RALGAPBQ86X10 1494 aa17.66■□□□□ 0.42
RPGRIP1-202ENST00000400017 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
RPGRIP1-202ENST00000400017 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
RPGRIP1-202ENST00000400017 PTPRGP23470 1445 aa17.65■□□□□ 0.42
RPGRIP1-202ENST00000400017 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
RPGRIP1-202ENST00000400017 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
RPGRIP1-202ENST00000400017 BACH2Q9BYV9 841 aa17.64■□□□□ 0.41
RPGRIP1-202ENST00000400017 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
RPGRIP1-202ENST00000400017 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
RPGRIP1-202ENST00000400017 DDRGK1Q96HY6 314 aa17.62■□□□□ 0.41
RPGRIP1-202ENST00000400017 PPM1GO15355 546 aaPredicted RBP17.62■□□□□ 0.41
RPGRIP1-202ENST00000400017 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
RPGRIP1-202ENST00000400017 LRPPRCP42704 1394 aaKnown RBP17.61■□□□□ 0.41
RPGRIP1-202ENST00000400017 DISP3Q9P2K9 1392 aa17.6■□□□□ 0.41
RPGRIP1-202ENST00000400017 MBD5Q9P267 1494 aa17.6■□□□□ 0.41
RPGRIP1-202ENST00000400017 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
RPGRIP1-202ENST00000400017 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
RPGRIP1-202ENST00000400017 KDM5CP41229 1560 aa17.59■□□□□ 0.41
RPGRIP1-202ENST00000400017 MS4A1P11836 297 aa17.59■□□□□ 0.41
RPGRIP1-202ENST00000400017 PER1O15534 1290 aaPredicted RBP17.58■□□□□ 0.4
RPGRIP1-202ENST00000400017 ATP10BO94823 1461 aa17.58■□□□□ 0.4
RPGRIP1-202ENST00000400017 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.4
RPGRIP1-202ENST00000400017 ITSN2Q9NZM3 1697 aa17.57■□□□□ 0.4
RPGRIP1-202ENST00000400017 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
RPGRIP1-202ENST00000400017 CDCA8Q53HL2 280 aa17.56■□□□□ 0.4
RPGRIP1-202ENST00000400017 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
RPGRIP1-202ENST00000400017 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
RPGRIP1-202ENST00000400017 PARD3Q8TEW0 1356 aa17.55■□□□□ 0.4
RPGRIP1-202ENST00000400017 APAF1O14727 1248 aa17.55■□□□□ 0.4
RPGRIP1-202ENST00000400017 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
RPGRIP1-202ENST00000400017 ERBINQ96RT1 1412 aa17.54■□□□□ 0.4
RPGRIP1-202ENST00000400017 TESK2Q96S53 571 aa17.54■□□□□ 0.4
RPGRIP1-202ENST00000400017 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
RPGRIP1-202ENST00000400017 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
RPGRIP1-202ENST00000400017 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.39
RPGRIP1-202ENST00000400017 CCDC141Q6ZP82 1450 aa17.52■□□□□ 0.39
RPGRIP1-202ENST00000400017 ARHGAP5Q13017 1502 aa17.51■□□□□ 0.39
RPGRIP1-202ENST00000400017 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
RPGRIP1-202ENST00000400017 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
RPGRIP1-202ENST00000400017 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
RPGRIP1-202ENST00000400017 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
RPGRIP1-202ENST00000400017 ADGBQ8N7X0 1667 aa17.49■□□□□ 0.39
RPGRIP1-202ENST00000400017 FAM135AQ9P2D6 1515 aa17.49■□□□□ 0.39
RPGRIP1-202ENST00000400017 PLEKHH2Q8IVE3 1493 aa17.49■□□□□ 0.39
RPGRIP1-202ENST00000400017 ARXQ96QS3 562 aa17.48■□□□□ 0.39
RPGRIP1-202ENST00000400017 AFAP1Q8N556 730 aa17.48■□□□□ 0.39
RPGRIP1-202ENST00000400017 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
RPGRIP1-202ENST00000400017 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
RPGRIP1-202ENST00000400017 BCAR3O75815 825 aa17.47■□□□□ 0.39
RPGRIP1-202ENST00000400017 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
RPGRIP1-202ENST00000400017 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.39
RPGRIP1-202ENST00000400017 KIF3BO15066 747 aa17.46■□□□□ 0.39
RPGRIP1-202ENST00000400017 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
RPGRIP1-202ENST00000400017 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
RPGRIP1-202ENST00000400017 NFKBIBQ15653 356 aa17.44■□□□□ 0.38
RPGRIP1-202ENST00000400017 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
RPGRIP1-202ENST00000400017 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
RPGRIP1-202ENST00000400017 SHANK2Q9UPX8 1470 aa17.43■□□□□ 0.38
RPGRIP1-202ENST00000400017 POLR1AO95602 1720 aaPredicted RBP17.43■□□□□ 0.38
RPGRIP1-202ENST00000400017 A2MP01023 1474 aa17.43■□□□□ 0.38
RPGRIP1-202ENST00000400017 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
RPGRIP1-202ENST00000400017 CFAP70Q5T0N1 1121 aa17.42■□□□□ 0.38
RPGRIP1-202ENST00000400017 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
RPGRIP1-202ENST00000400017 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
RPGRIP1-202ENST00000400017 SYCP2Q9BX26 1530 aa17.41■□□□□ 0.38
RPGRIP1-202ENST00000400017 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
RPGRIP1-202ENST00000400017 SLKQ9H2G2 1235 aaPredicted RBP17.41■□□□□ 0.38
RPGRIP1-202ENST00000400017 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
RPGRIP1-202ENST00000400017 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
RPGRIP1-202ENST00000400017 GSE1Q14687 1217 aa17.39■□□□□ 0.37
RPGRIP1-202ENST00000400017 COL17A1Q9UMD9 1497 aaPredicted RBP17.39■□□□□ 0.37
RPGRIP1-202ENST00000400017 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
RPGRIP1-202ENST00000400017 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.37
RPGRIP1-202ENST00000400017 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1-202ENST00000400017 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1-202ENST00000400017 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
RPGRIP1-202ENST00000400017 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
RPGRIP1-202ENST00000400017 BRPF3Q9ULD4 1205 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms