RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 AFAP1Q8N556 730 aa11.55□□□□□ -0.56
USP16-204ENST00000399976 CAMSAP1Q5T5Y3 1602 aa11.54□□□□□ -0.56
USP16-204ENST00000399976 C3P01024 1663 aa11.54□□□□□ -0.56
USP16-204ENST00000399976 ZNF142P52746 1687 aaPredicted RBP11.54□□□□□ -0.56
USP16-204ENST00000399976 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
USP16-204ENST00000399976 ARHGAP31Q2M1Z3 1444 aa11.53□□□□□ -0.56
USP16-204ENST00000399976 KIF15Q9NS87 1388 aa11.52□□□□□ -0.56
USP16-204ENST00000399976 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
USP16-204ENST00000399976 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.56
USP16-204ENST00000399976 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
USP16-204ENST00000399976 RPRD2Q5VT52 1461 aaKnown RBP11.52□□□□□ -0.57
USP16-204ENST00000399976 NPATQ14207 1427 aa11.52□□□□□ -0.57
USP16-204ENST00000399976 PREX1Q8TCU6 1659 aa11.51□□□□□ -0.57
USP16-204ENST00000399976 ABCC3O15438 1527 aa11.51□□□□□ -0.57
USP16-204ENST00000399976 CEP152O94986 1710 aa11.51□□□□□ -0.57
USP16-204ENST00000399976 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
USP16-204ENST00000399976 NAIPQ13075 1403 aa11.49□□□□□ -0.57
USP16-204ENST00000399976 ANKRD50Q9ULJ7 1429 aa11.49□□□□□ -0.57
USP16-204ENST00000399976 SPATA31D1Q6ZQQ2 1576 aa11.49□□□□□ -0.57
USP16-204ENST00000399976 HRCP23327 699 aa11.49□□□□□ -0.57
USP16-204ENST00000399976 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
USP16-204ENST00000399976 PZPP20742 1482 aa11.48□□□□□ -0.57
USP16-204ENST00000399976 NEURL4Q96JN8 1562 aa11.47□□□□□ -0.57
USP16-204ENST00000399976 PTPRMP28827 1452 aa11.46□□□□□ -0.57
USP16-204ENST00000399976 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
USP16-204ENST00000399976 MYO3AQ8NEV4 1616 aa11.44□□□□□ -0.58
USP16-204ENST00000399976 E9PCH4 1651 aa11.44□□□□□ -0.58
USP16-204ENST00000399976 SPHKAPQ2M3C7 1700 aa11.44□□□□□ -0.58
USP16-204ENST00000399976 KANK1Q14678 1352 aa11.43□□□□□ -0.58
USP16-204ENST00000399976 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
USP16-204ENST00000399976 NLRP1Q9C000 1473 aa11.41□□□□□ -0.58
USP16-204ENST00000399976 SETD5Q9C0A6 1442 aa11.4□□□□□ -0.59
USP16-204ENST00000399976 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
USP16-204ENST00000399976 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
USP16-204ENST00000399976 NOS1P29475 1434 aa11.38□□□□□ -0.59
USP16-204ENST00000399976 TRPM2O94759 1503 aa11.38□□□□□ -0.59
USP16-204ENST00000399976 PTPRTO14522 1441 aa11.37□□□□□ -0.59
USP16-204ENST00000399976 SYNMO15061 1565 aa11.37□□□□□ -0.59
USP16-204ENST00000399976 UBR1Q8IWV7 1749 aa11.37□□□□□ -0.59
USP16-204ENST00000399976 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
USP16-204ENST00000399976 POLR1AO95602 1720 aaPredicted RBP11.36□□□□□ -0.59
USP16-204ENST00000399976 ZMYM3Q14202 1370 aa11.36□□□□□ -0.59
USP16-204ENST00000399976 PLA2R1Q13018 1463 aa11.35□□□□□ -0.59
USP16-204ENST00000399976 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
USP16-204ENST00000399976 KIF3BO15066 747 aa11.35□□□□□ -0.59
USP16-204ENST00000399976 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
USP16-204ENST00000399976 RRP7BPQ9NSQ0 103 aa11.34□□□□□ -0.59
USP16-204ENST00000399976 KIF1BO60333 1816 aa11.34□□□□□ -0.59
USP16-204ENST00000399976 ADGRB3O60242 1522 aa11.34□□□□□ -0.59
USP16-204ENST00000399976 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
USP16-204ENST00000399976 SLIT1O75093 1534 aa11.32□□□□□ -0.6
USP16-204ENST00000399976 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
USP16-204ENST00000399976 IFT172Q9UG01 1749 aa11.32□□□□□ -0.6
USP16-204ENST00000399976 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
USP16-204ENST00000399976 UGGT1Q9NYU2 1555 aa11.31□□□□□ -0.6
USP16-204ENST00000399976 TRIM26Q12899 539 aaPredicted RBP11.31□□□□□ -0.6
USP16-204ENST00000399976 UHRF1BP1Q6BDS2 1440 aa11.3□□□□□ -0.6
USP16-204ENST00000399976 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
USP16-204ENST00000399976 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
USP16-204ENST00000399976 ESF1Q9H501 851 aaKnown RBP11.3□□□□□ -0.6
USP16-204ENST00000399976 CHIC2Q9UKJ5 165 aa11.29□□□□□ -0.6
USP16-204ENST00000399976 TNRQ92752 1358 aa11.29□□□□□ -0.6
USP16-204ENST00000399976 RAB3GAP2Q9H2M9 1393 aa11.29□□□□□ -0.6
USP16-204ENST00000399976 CLTCL1P53675 1640 aa11.28□□□□□ -0.6
USP16-204ENST00000399976 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
USP16-204ENST00000399976 NUP155O75694 1391 aa11.27□□□□□ -0.6
USP16-204ENST00000399976 MED14O60244 1454 aa11.27□□□□□ -0.61
USP16-204ENST00000399976 STRCQ7RTU9 1775 aa11.27□□□□□ -0.61
USP16-204ENST00000399976 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
USP16-204ENST00000399976 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
USP16-204ENST00000399976 GGT6Q6P531 493 aa11.26□□□□□ -0.61
USP16-204ENST00000399976 PPLO60437 1756 aa11.26□□□□□ -0.61
USP16-204ENST00000399976 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
USP16-204ENST00000399976 LAMC1P11047 1609 aa11.23□□□□□ -0.61
USP16-204ENST00000399976 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
USP16-204ENST00000399976 IQGAP1P46940 1657 aa11.22□□□□□ -0.61
USP16-204ENST00000399976 CFAP65Q6ZU64 1925 aaKnown RBP11.22□□□□□ -0.61
USP16-204ENST00000399976 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
USP16-204ENST00000399976 SETBP1Q9Y6X0 1596 aa11.21□□□□□ -0.62
USP16-204ENST00000399976 MLECQ14165 292 aa11.2□□□□□ -0.62
USP16-204ENST00000399976 NEXMIFQ5QGS0 1516 aa11.2□□□□□ -0.62
USP16-204ENST00000399976 PRAG1Q86YV5 1406 aa11.19□□□□□ -0.62
USP16-204ENST00000399976 MYOM2P54296 1465 aa11.19□□□□□ -0.62
USP16-204ENST00000399976 SETD1AO15047 1707 aaKnown RBP11.19□□□□□ -0.62
USP16-204ENST00000399976 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
USP16-204ENST00000399976 STAC3Q96MF2 364 aa11.19□□□□□ -0.62
USP16-204ENST00000399976 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
USP16-204ENST00000399976 SPATA31E1Q6ZUB1 1445 aa11.18□□□□□ -0.62
USP16-204ENST00000399976 ITGAEP38570 1179 aa11.18□□□□□ -0.62
USP16-204ENST00000399976 ANKRD30BQ9BXX2 1392 aa11.18□□□□□ -0.62
USP16-204ENST00000399976 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
USP16-204ENST00000399976 PKD2Q13563 968 aa11.17□□□□□ -0.62
USP16-204ENST00000399976 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
USP16-204ENST00000399976 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
USP16-204ENST00000399976 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
USP16-204ENST00000399976 KNDC1Q76NI1 1749 aa11.16□□□□□ -0.62
USP16-204ENST00000399976 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
USP16-204ENST00000399976 NRXN3Q9Y4C0 1643 aa11.16□□□□□ -0.62
USP16-204ENST00000399976 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.62
USP16-204ENST00000399976 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms