RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 MSNP26038 577 aaKnown RBP11.1□□□□□ -0.63
RETREG1-202ENST00000399793 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
RETREG1-202ENST00000399793 ZNF326Q5BKZ1 582 aaKnown RBP11.09□□□□□ -0.63
RETREG1-202ENST00000399793 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
RETREG1-202ENST00000399793 NAIPQ13075 1403 aa11.09□□□□□ -0.63
RETREG1-202ENST00000399793 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
RETREG1-202ENST00000399793 DYNC1I1O14576 645 aa11.08□□□□□ -0.64
RETREG1-202ENST00000399793 KIF20AO95235 890 aa11.08□□□□□ -0.64
RETREG1-202ENST00000399793 CFAP43Q8NDM7 1665 aa11.08□□□□□ -0.64
RETREG1-202ENST00000399793 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
RETREG1-202ENST00000399793 CCDC173Q0VFZ6 552 aa11.08□□□□□ -0.64
RETREG1-202ENST00000399793 NLRP1Q9C000 1473 aa11.07□□□□□ -0.64
RETREG1-202ENST00000399793 PPP1R9BQ96SB3 815 aa11.07□□□□□ -0.64
RETREG1-202ENST00000399793 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
RETREG1-202ENST00000399793 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
RETREG1-202ENST00000399793 GTPBP4Q9BZE4 634 aaKnown RBP11.07□□□□□ -0.64
RETREG1-202ENST00000399793 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
RETREG1-202ENST00000399793 CHMP5Q9NZZ3 219 aa11.06□□□□□ -0.64
RETREG1-202ENST00000399793 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
RETREG1-202ENST00000399793 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
RETREG1-202ENST00000399793 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
RETREG1-202ENST00000399793 ATP1B4Q9UN42 357 aaPredicted RBP11.05□□□□□ -0.64
RETREG1-202ENST00000399793 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
RETREG1-202ENST00000399793 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
RETREG1-202ENST00000399793 XPCQ01831 940 aaPredicted RBP11.04□□□□□ -0.64
RETREG1-202ENST00000399793 FTSJ3Q8IY81 847 aaKnown RBP11.03□□□□□ -0.64
RETREG1-202ENST00000399793 KIF15Q9NS87 1388 aa11.02□□□□□ -0.64
RETREG1-202ENST00000399793 TBC1D32Q96NH3 1257 aa11.02□□□□□ -0.64
RETREG1-202ENST00000399793 MIA2Q96PC5 1412 aa11.02□□□□□ -0.65
RETREG1-202ENST00000399793 NASPP49321 788 aaPredicted RBP11.02□□□□□ -0.65
RETREG1-202ENST00000399793 CBX1P83916 185 aa11.02□□□□□ -0.65
RETREG1-202ENST00000399793 ZNF500O60304 480 aaPredicted RBP11.02□□□□□ -0.65
RETREG1-202ENST00000399793 ZBTB22O15209 634 aa11.01□□□□□ -0.65
RETREG1-202ENST00000399793 UPF2Q9HAU5 1272 aaKnown RBP11.01□□□□□ -0.65
RETREG1-202ENST00000399793 HECW1Q76N89 1606 aa11.01□□□□□ -0.65
RETREG1-202ENST00000399793 RALBP1Q15311 655 aa11□□□□□ -0.65
RETREG1-202ENST00000399793 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
RETREG1-202ENST00000399793 NOL7Q9UMY1 257 aaKnown RBP11□□□□□ -0.65
RETREG1-202ENST00000399793 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
RETREG1-202ENST00000399793 SASS6Q6UVJ0 657 aa10.99□□□□□ -0.65
RETREG1-202ENST00000399793 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
RETREG1-202ENST00000399793 IGHDP01880 384 aa10.99□□□□□ -0.65
RETREG1-202ENST00000399793 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
RETREG1-202ENST00000399793 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
RETREG1-202ENST00000399793 CUX1P39880 1505 aa10.99□□□□□ -0.65
RETREG1-202ENST00000399793 MPHOSPH9Q99550 1183 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
RETREG1-202ENST00000399793 CDK11BP21127 795 aaKnown RBP10.98□□□□□ -0.65
RETREG1-202ENST00000399793 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 HS1BP3Q53T59 392 aa10.98□□□□□ -0.65
RETREG1-202ENST00000399793 CGNQ9P2M7 1197 aaKnown RBP10.97□□□□□ -0.65
RETREG1-202ENST00000399793 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
RETREG1-202ENST00000399793 USP47Q96K76 1375 aa10.97□□□□□ -0.65
RETREG1-202ENST00000399793 DNTTIP2Q5QJE6 756 aaKnown RBP10.97□□□□□ -0.65
RETREG1-202ENST00000399793 NLRP13Q86W25 1043 aa10.97□□□□□ -0.65
RETREG1-202ENST00000399793 ZNF692Q9BU19 519 aaPredicted RBP10.97□□□□□ -0.65
RETREG1-202ENST00000399793 ATP2B3Q16720 1220 aa10.96□□□□□ -0.65
RETREG1-202ENST00000399793 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.96□□□□□ -0.65
RETREG1-202ENST00000399793 PANK3Q9H999 370 aa10.96□□□□□ -0.65
RETREG1-202ENST00000399793 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.66
RETREG1-202ENST00000399793 RPRD2Q5VT52 1461 aaKnown RBP10.95□□□□□ -0.66
RETREG1-202ENST00000399793 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
RETREG1-202ENST00000399793 JARID2Q92833 1246 aaPredicted RBP10.95□□□□□ -0.66
RETREG1-202ENST00000399793 TNPO1Q92973 898 aaKnown RBP10.95□□□□□ -0.66
RETREG1-202ENST00000399793 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
RETREG1-202ENST00000399793 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
RETREG1-202ENST00000399793 IGSF3O75054 1194 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 ZKSCAN5Q9Y2L8 839 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 EIF3AQ14152 1382 aaKnown RBP10.93□□□□□ -0.66
RETREG1-202ENST00000399793 TEX2Q8IWB9 1127 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 TSC1Q92574 1164 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
RETREG1-202ENST00000399793 ZMYM4Q5VZL5 1548 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 GBP4Q96PP9 640 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
RETREG1-202ENST00000399793 KDM6BO15054 1643 aa10.92□□□□□ -0.66
RETREG1-202ENST00000399793 DUSP27Q5VZP5 1158 aa10.92□□□□□ -0.66
RETREG1-202ENST00000399793 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
RETREG1-202ENST00000399793 ANKRD30BQ9BXX2 1392 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 DDIT3P35638 169 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 MYRIPQ8NFW9 859 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
RETREG1-202ENST00000399793 PLEKHH2Q8IVE3 1493 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 IRX5P78411 483 aaPredicted RBP10.91□□□□□ -0.66
RETREG1-202ENST00000399793 PDLIM2Q96JY6 352 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 E9PSI1 815 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
RETREG1-202ENST00000399793 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
RETREG1-202ENST00000399793 HSCBQ8IWL3 235 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 KDM5CP41229 1560 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 PTMSP20962 102 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 MCM5P33992 734 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 C22orf23Q9BZE7 217 aa10.9□□□□□ -0.66
RETREG1-202ENST00000399793 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms