RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ENOX2Q16206 610 aaKnown RBP10.5□□□□□ -0.73
CACNA1C-220ENST00000399655 RGS3P49796 1198 aa10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 TXLNBQ8N3L3 684 aa10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 AXDND1Q5T1B0 1012 aaPredicted RBP10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 PKNOX2Q96KN3 472 aa10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 R3HCC1Q9Y3T6 440 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 GTPBP4Q9BZE4 634 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 ZWINTO95229 277 aa10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
CACNA1C-220ENST00000399655 TMCO5BA8MYB1 307 aa10.48□□□□□ -0.73
CACNA1C-220ENST00000399655 PCMTD1Q96MG8 357 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-220ENST00000399655 ST18O60284 1047 aa10.48□□□□□ -0.73
CACNA1C-220ENST00000399655 CCDC91Q7Z6B0 441 aa10.48□□□□□ -0.73
CACNA1C-220ENST00000399655 EPS15P42566 896 aa10.48□□□□□ -0.73
CACNA1C-220ENST00000399655 PAF1Q8N7H5 531 aa10.48□□□□□ -0.73
CACNA1C-220ENST00000399655 SEPT10Q9P0V9 454 aa10.47□□□□□ -0.73
CACNA1C-220ENST00000399655 CCDC43Q96MW1 224 aaKnown RBP10.47□□□□□ -0.73
CACNA1C-220ENST00000399655 KNSTRNQ9Y448 316 aa10.47□□□□□ -0.73
CACNA1C-220ENST00000399655 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
CACNA1C-220ENST00000399655 CT47B1P0C2W7 299 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-220ENST00000399655 PAIP2Q9BPZ3 127 aaKnown RBP10.46□□□□□ -0.73
CACNA1C-220ENST00000399655 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.73
CACNA1C-220ENST00000399655 AKAP17AQ02040 695 aaKnown RBP10.46□□□□□ -0.74
CACNA1C-220ENST00000399655 NAP1L1P55209 391 aaKnown RBP10.46□□□□□ -0.74
CACNA1C-220ENST00000399655 POLR3GO15318 223 aaPredicted RBP10.46□□□□□ -0.74
CACNA1C-220ENST00000399655 IPO8O15397 1037 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-220ENST00000399655 IQCEQ6IPM2 695 aa10.45□□□□□ -0.74
CACNA1C-220ENST00000399655 SSR1P43307 286 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-220ENST00000399655 ZNF592Q92610 1267 aa10.45□□□□□ -0.74
CACNA1C-220ENST00000399655 MFAP1P55081 439 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-220ENST00000399655 SWAP70Q9UH65 585 aa10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 FAM107BQ9H098 131 aa10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 RSPH4AQ5TD94 716 aa10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 LUC7LQ9NQ29 371 aaKnown RBP10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 WDR66Q8TBY9 1149 aa10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 H3BQV1 296 aa10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
CACNA1C-220ENST00000399655 LRRFIP1Q32MZ4 808 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 DESP17661 470 aa10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 DAAM2Q86T65 1068 aa10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 WWC2Q6AWC2 1192 aa10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 NAT10Q9H0A0 1025 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 IPO9Q96P70 1041 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 CCDC146Q8IYE0 955 aa10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-220ENST00000399655 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
CACNA1C-220ENST00000399655 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
CACNA1C-220ENST00000399655 CCDC97Q96F63 343 aaPredicted RBP10.42□□□□□ -0.74
CACNA1C-220ENST00000399655 FAM13BQ9NYF5 915 aa10.42□□□□□ -0.74
CACNA1C-220ENST00000399655 KIF3CO14782 793 aa10.41□□□□□ -0.74
CACNA1C-220ENST00000399655 OFD1O75665 1012 aa10.41□□□□□ -0.74
CACNA1C-220ENST00000399655 SOGA3Q5TF21 947 aa10.41□□□□□ -0.74
CACNA1C-220ENST00000399655 ERC1Q8IUD2 1116 aa10.41□□□□□ -0.74
CACNA1C-220ENST00000399655 SMC1AQ14683 1233 aaKnown RBP10.41□□□□□ -0.74
CACNA1C-220ENST00000399655 TCHPQ9BT92 498 aa10.41□□□□□ -0.74
CACNA1C-220ENST00000399655 IRX6P78412 446 aaPredicted RBP10.4□□□□□ -0.74
CACNA1C-220ENST00000399655 ANKRD62A6NC57 917 aa10.4□□□□□ -0.74
CACNA1C-220ENST00000399655 AMOTL1Q8IY63 956 aa10.4□□□□□ -0.74
CACNA1C-220ENST00000399655 ZFYVE27Q5T4F4 411 aa10.4□□□□□ -0.74
CACNA1C-220ENST00000399655 E9PSI1 815 aa10.4□□□□□ -0.74
CACNA1C-220ENST00000399655 GORABQ5T7V8 394 aa10.4□□□□□ -0.74
CACNA1C-220ENST00000399655 ERLIN1O75477 346 aa10.4□□□□□ -0.75
CACNA1C-220ENST00000399655 CCDC6Q16204 474 aa10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 NASPP49321 788 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 RNF20Q5VTR2 975 aa10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 G3V3G9 751 aa10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 CPLX2Q6PUV4 134 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 CHMP5Q9NZZ3 219 aa10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-220ENST00000399655 FAM193AP78312 1265 aa10.38□□□□□ -0.75
CACNA1C-220ENST00000399655 CTDP1Q9Y5B0 961 aaPredicted RBP10.38□□□□□ -0.75
CACNA1C-220ENST00000399655 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
CACNA1C-220ENST00000399655 TRIM21P19474 475 aaKnown RBP10.38□□□□□ -0.75
CACNA1C-220ENST00000399655 CC2D1BQ5T0F9 858 aaKnown RBP10.38□□□□□ -0.75
CACNA1C-220ENST00000399655 SUDS3Q9H7L9 328 aaPredicted RBP10.38□□□□□ -0.75
CACNA1C-220ENST00000399655 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
CACNA1C-220ENST00000399655 SMARCE1Q969G3 411 aa10.37□□□□□ -0.75
CACNA1C-220ENST00000399655 BMS1Q14692 1282 aaKnown RBP10.37□□□□□ -0.75
CACNA1C-220ENST00000399655 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
CACNA1C-220ENST00000399655 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 RTF1Q92541 710 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 TRIM29Q14134 588 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 SYNE3Q6ZMZ3 975 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 FAM114A2Q9NRY5 505 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 TXLNAP40222 546 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 SYCP1Q15431 976 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 DDX46Q7L014 1031 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-220ENST00000399655 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
CACNA1C-220ENST00000399655 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
CACNA1C-220ENST00000399655 SEPT14Q6ZU15 432 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms