RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
LAMA3-203ENST00000399516 RRP1P56182 461 aaKnown RBP13.97□□□□□ -0.17
LAMA3-203ENST00000399516 FOXD4L5Q5VV16 416 aaPredicted RBP13.96□□□□□ -0.17
LAMA3-203ENST00000399516 FOXD4L4Q8WXT5 416 aaPredicted RBP13.96□□□□□ -0.17
LAMA3-203ENST00000399516 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.18
LAMA3-203ENST00000399516 A0A0U1RQG5 324 aaPredicted RBP13.96□□□□□ -0.18
LAMA3-203ENST00000399516 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
LAMA3-203ENST00000399516 CARMIL2Q6F5E8 1435 aa13.95□□□□□ -0.18
LAMA3-203ENST00000399516 SLC4A3P48751 1232 aa13.93□□□□□ -0.18
LAMA3-203ENST00000399516 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
LAMA3-203ENST00000399516 LMOD3Q0VAK6 560 aa13.93□□□□□ -0.18
LAMA3-203ENST00000399516 TPM3P06753 285 aa13.93□□□□□ -0.18
LAMA3-203ENST00000399516 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
LAMA3-203ENST00000399516 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
LAMA3-203ENST00000399516 DDX49Q9Y6V7 483 aaKnown RBP13.92□□□□□ -0.18
LAMA3-203ENST00000399516 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
LAMA3-203ENST00000399516 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 ATP6V1DQ9Y5K8 247 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 SETQ01105 290 aaPredicted RBP13.91□□□□□ -0.18
LAMA3-203ENST00000399516 GORABQ5T7V8 394 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 RASSF8Q8NHQ8 419 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 SLC4A10Q6U841 1118 aa13.91□□□□□ -0.18
LAMA3-203ENST00000399516 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
LAMA3-203ENST00000399516 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
LAMA3-203ENST00000399516 USP47Q96K76 1375 aa13.9□□□□□ -0.18
LAMA3-203ENST00000399516 PLIN1O60240 522 aa13.9□□□□□ -0.18
LAMA3-203ENST00000399516 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
LAMA3-203ENST00000399516 CCDC144AA2RUR9 1427 aa13.89□□□□□ -0.19
LAMA3-203ENST00000399516 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
LAMA3-203ENST00000399516 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
LAMA3-203ENST00000399516 CREBRFQ8IUR6 639 aa13.88□□□□□ -0.19
LAMA3-203ENST00000399516 E9PSI1 815 aa13.88□□□□□ -0.19
LAMA3-203ENST00000399516 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
LAMA3-203ENST00000399516 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
LAMA3-203ENST00000399516 H3BQV1 296 aa13.87□□□□□ -0.19
LAMA3-203ENST00000399516 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
LAMA3-203ENST00000399516 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
LAMA3-203ENST00000399516 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.87□□□□□ -0.19
LAMA3-203ENST00000399516 ZNF771Q7L3S4 317 aaPredicted RBP13.86□□□□□ -0.19
LAMA3-203ENST00000399516 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
LAMA3-203ENST00000399516 MLECQ14165 292 aa13.86□□□□□ -0.19
LAMA3-203ENST00000399516 GGT6Q6P531 493 aa13.86□□□□□ -0.19
LAMA3-203ENST00000399516 GOLGA6L19H0YKK7 550 aa13.86□□□□□ -0.19
LAMA3-203ENST00000399516 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
LAMA3-203ENST00000399516 SF3A1Q15459 793 aaKnown RBP13.84□□□□□ -0.19
LAMA3-203ENST00000399516 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
LAMA3-203ENST00000399516 ANKRD45Q5TZF3 282 aa13.84□□□□□ -0.19
LAMA3-203ENST00000399516 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
LAMA3-203ENST00000399516 PANK3Q9H999 370 aa13.84□□□□□ -0.19
LAMA3-203ENST00000399516 GPS2Q13227 327 aa13.83□□□□□ -0.2
LAMA3-203ENST00000399516 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
LAMA3-203ENST00000399516 PDE4CQ08493 712 aa13.83□□□□□ -0.2
LAMA3-203ENST00000399516 BECN2A8MW95 431 aa13.83□□□□□ -0.2
LAMA3-203ENST00000399516 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
LAMA3-203ENST00000399516 REC8O95072 547 aa13.82□□□□□ -0.2
LAMA3-203ENST00000399516 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
LAMA3-203ENST00000399516 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
LAMA3-203ENST00000399516 FAM13BQ9NYF5 915 aa13.82□□□□□ -0.2
LAMA3-203ENST00000399516 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
LAMA3-203ENST00000399516 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
LAMA3-203ENST00000399516 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
LAMA3-203ENST00000399516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
LAMA3-203ENST00000399516 ST20-MTHFSA0A0A6YYL1 179 aa13.81□□□□□ -0.2
LAMA3-203ENST00000399516 CCDC70Q6NSX1 233 aa13.81□□□□□ -0.2
LAMA3-203ENST00000399516 TPM1P09493 284 aa13.8□□□□□ -0.2
LAMA3-203ENST00000399516 TPD52L1Q16890 204 aaPredicted RBP13.8□□□□□ -0.2
LAMA3-203ENST00000399516 PES1O00541 588 aaKnown RBP13.8□□□□□ -0.2
LAMA3-203ENST00000399516 COG6Q9Y2V7 657 aa13.8□□□□□ -0.2
LAMA3-203ENST00000399516 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
LAMA3-203ENST00000399516 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
LAMA3-203ENST00000399516 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 CUX1P39880 1505 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 TEX35Q5T0J7 233 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 CHMP4CQ96CF2 233 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
LAMA3-203ENST00000399516 ROCK1Q13464 1354 aa13.78□□□□□ -0.2
LAMA3-203ENST00000399516 MCTP1Q6DN14 999 aa13.78□□□□□ -0.2
LAMA3-203ENST00000399516 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
LAMA3-203ENST00000399516 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
LAMA3-203ENST00000399516 TPM2P07951 284 aa13.77□□□□□ -0.21
LAMA3-203ENST00000399516 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
LAMA3-203ENST00000399516 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
LAMA3-203ENST00000399516 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
LAMA3-203ENST00000399516 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
LAMA3-203ENST00000399516 PDS5BQ9NTI5 1447 aa13.75□□□□□ -0.21
LAMA3-203ENST00000399516 AMPHP49418 695 aa13.74□□□□□ -0.21
LAMA3-203ENST00000399516 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
LAMA3-203ENST00000399516 DZIP1LQ8IYY4 767 aaKnown RBP13.74□□□□□ -0.21
LAMA3-203ENST00000399516 KIF3BO15066 747 aa13.74□□□□□ -0.21
LAMA3-203ENST00000399516 RUFY2Q8WXA3 655 aa13.74□□□□□ -0.21
LAMA3-203ENST00000399516 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
LAMA3-203ENST00000399516 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
LAMA3-203ENST00000399516 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
LAMA3-203ENST00000399516 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
LAMA3-203ENST00000399516 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms