RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
GIN1-201ENST00000399004 SPHKAPQ2M3C7 1700 aa12.34□□□□□ -0.43
GIN1-201ENST00000399004 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
GIN1-201ENST00000399004 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
GIN1-201ENST00000399004 MSH5O43196 834 aa12.33□□□□□ -0.43
GIN1-201ENST00000399004 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
GIN1-201ENST00000399004 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
GIN1-201ENST00000399004 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
GIN1-201ENST00000399004 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
GIN1-201ENST00000399004 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
GIN1-201ENST00000399004 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
GIN1-201ENST00000399004 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
GIN1-201ENST00000399004 ERBINQ96RT1 1412 aa12.31□□□□□ -0.44
GIN1-201ENST00000399004 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
GIN1-201ENST00000399004 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
GIN1-201ENST00000399004 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
GIN1-201ENST00000399004 DHX29Q7Z478 1369 aaKnown RBP12.29□□□□□ -0.44
GIN1-201ENST00000399004 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
GIN1-201ENST00000399004 TET3O43151 1660 aa12.28□□□□□ -0.44
GIN1-201ENST00000399004 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
GIN1-201ENST00000399004 MROH1Q8NDA8 1641 aa12.27□□□□□ -0.44
GIN1-201ENST00000399004 MADDQ8WXG6 1647 aa12.27□□□□□ -0.44
GIN1-201ENST00000399004 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
GIN1-201ENST00000399004 INSRP06213 1382 aa12.27□□□□□ -0.45
GIN1-201ENST00000399004 PLA2R1Q13018 1463 aa12.27□□□□□ -0.45
GIN1-201ENST00000399004 ZNF644Q9H582 1327 aaPredicted RBP12.26□□□□□ -0.45
GIN1-201ENST00000399004 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
GIN1-201ENST00000399004 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
GIN1-201ENST00000399004 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
GIN1-201ENST00000399004 TRPM2O94759 1503 aa12.25□□□□□ -0.45
GIN1-201ENST00000399004 L3MBTL2Q969R5 705 aa12.24□□□□□ -0.45
GIN1-201ENST00000399004 NBPF8Q3BBV2 869 aa12.24□□□□□ -0.45
GIN1-201ENST00000399004 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
GIN1-201ENST00000399004 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
GIN1-201ENST00000399004 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
GIN1-201ENST00000399004 PLCH2O75038 1416 aa12.23□□□□□ -0.45
GIN1-201ENST00000399004 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
GIN1-201ENST00000399004 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
GIN1-201ENST00000399004 KTN1Q86UP2 1357 aaKnown RBP12.23□□□□□ -0.45
GIN1-201ENST00000399004 MYOM1P52179 1685 aa12.22□□□□□ -0.45
GIN1-201ENST00000399004 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
GIN1-201ENST00000399004 ZC3H13Q5T200 1668 aaKnown RBP12.22□□□□□ -0.45
GIN1-201ENST00000399004 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
GIN1-201ENST00000399004 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
GIN1-201ENST00000399004 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
GIN1-201ENST00000399004 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
GIN1-201ENST00000399004 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
GIN1-201ENST00000399004 PTPRTO14522 1441 aa12.2□□□□□ -0.46
GIN1-201ENST00000399004 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
GIN1-201ENST00000399004 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
GIN1-201ENST00000399004 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
GIN1-201ENST00000399004 CFDP1Q9UEE9 299 aaPredicted RBP12.18□□□□□ -0.46
GIN1-201ENST00000399004 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
GIN1-201ENST00000399004 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
GIN1-201ENST00000399004 A2MP01023 1474 aa12.18□□□□□ -0.46
GIN1-201ENST00000399004 ARHGAP5Q13017 1502 aa12.17□□□□□ -0.46
GIN1-201ENST00000399004 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
GIN1-201ENST00000399004 COL17A1Q9UMD9 1497 aaPredicted RBP12.17□□□□□ -0.46
GIN1-201ENST00000399004 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
GIN1-201ENST00000399004 CLTCL1P53675 1640 aa12.16□□□□□ -0.46
GIN1-201ENST00000399004 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
GIN1-201ENST00000399004 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
GIN1-201ENST00000399004 NRXN1Q9ULB1 1477 aa12.15□□□□□ -0.46
GIN1-201ENST00000399004 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
GIN1-201ENST00000399004 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
GIN1-201ENST00000399004 SYNMO15061 1565 aa12.15□□□□□ -0.47
GIN1-201ENST00000399004 SCAPERQ9BY12 1400 aa12.14□□□□□ -0.47
GIN1-201ENST00000399004 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
GIN1-201ENST00000399004 USP47Q96K76 1375 aa12.13□□□□□ -0.47
GIN1-201ENST00000399004 PLEKHD1A6NEE1 506 aa12.13□□□□□ -0.47
GIN1-201ENST00000399004 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
GIN1-201ENST00000399004 PIK3C2BO00750 1634 aa12.12□□□□□ -0.47
GIN1-201ENST00000399004 MYOM2P54296 1465 aa12.11□□□□□ -0.47
GIN1-201ENST00000399004 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
GIN1-201ENST00000399004 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
GIN1-201ENST00000399004 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
GIN1-201ENST00000399004 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
GIN1-201ENST00000399004 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
GIN1-201ENST00000399004 MROH2AA6NES4 1674 aa12.11□□□□□ -0.47
GIN1-201ENST00000399004 PPLO60437 1756 aa12.11□□□□□ -0.47
GIN1-201ENST00000399004 KIF1BO60333 1816 aa12.1□□□□□ -0.47
GIN1-201ENST00000399004 EFCAB6Q5THR3 1501 aa12.1□□□□□ -0.47
GIN1-201ENST00000399004 MAP3K4Q9Y6R4 1608 aa12.1□□□□□ -0.47
GIN1-201ENST00000399004 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
GIN1-201ENST00000399004 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
GIN1-201ENST00000399004 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
GIN1-201ENST00000399004 PPRC1Q5VV67 1664 aaKnown RBP12.08□□□□□ -0.48
GIN1-201ENST00000399004 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
GIN1-201ENST00000399004 LAS1LQ9Y4W2 734 aaKnown RBP12.07□□□□□ -0.48
GIN1-201ENST00000399004 NUP155O75694 1391 aa12.07□□□□□ -0.48
GIN1-201ENST00000399004 PARD3Q8TEW0 1356 aa12.07□□□□□ -0.48
GIN1-201ENST00000399004 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
GIN1-201ENST00000399004 ABCA6Q8N139 1617 aa12.07□□□□□ -0.48
GIN1-201ENST00000399004 FRMPD1Q5SYB0 1578 aa12.07□□□□□ -0.48
GIN1-201ENST00000399004 HECW2Q9P2P5 1572 aa12.06□□□□□ -0.48
GIN1-201ENST00000399004 ADGRB3O60242 1522 aa12.06□□□□□ -0.48
GIN1-201ENST00000399004 PKD2Q13563 968 aa12.05□□□□□ -0.48
GIN1-201ENST00000399004 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
GIN1-201ENST00000399004 BLMP54132 1417 aaPredicted RBP12.04□□□□□ -0.48
GIN1-201ENST00000399004 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms