RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 ARHGEF40Q8TER5 1519 aa24.57■■□□□ 1.52
CDH23-204ENST00000398792 BCORL1Q5H9F3 1711 aa24.57■■□□□ 1.52
CDH23-204ENST00000398792 IQGAP3Q86VI3 1631 aa24.54■■□□□ 1.52
CDH23-204ENST00000398792 REREQ9P2R6 1566 aa24.54■■□□□ 1.52
CDH23-204ENST00000398792 NUP155O75694 1391 aa24.53■■□□□ 1.52
CDH23-204ENST00000398792 RNF17Q9BXT8 1623 aaKnown RBP24.53■■□□□ 1.52
CDH23-204ENST00000398792 PRDM15P57071 1507 aaPredicted RBP24.53■■□□□ 1.52
CDH23-204ENST00000398792 FAM135AQ9P2D6 1515 aa24.53■■□□□ 1.52
CDH23-204ENST00000398792 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
CDH23-204ENST00000398792 MPHOSPH9Q99550 1183 aa24.51■■□□□ 1.51
CDH23-204ENST00000398792 ATP10AO60312 1499 aa24.5■■□□□ 1.51
CDH23-204ENST00000398792 VWDEQ8N2E2 1590 aa24.47■■□□□ 1.51
CDH23-204ENST00000398792 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
CDH23-204ENST00000398792 SLC4A1APQ9BWU0 796 aaKnown RBP24.47■■□□□ 1.51
CDH23-204ENST00000398792 KIF3BO15066 747 aa24.46■■□□□ 1.51
CDH23-204ENST00000398792 AGLP35573 1532 aa24.43■■□□□ 1.5
CDH23-204ENST00000398792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.5
CDH23-204ENST00000398792 SIGLEC1Q9BZZ2 1709 aa24.42■■□□□ 1.5
CDH23-204ENST00000398792 TET3O43151 1660 aa24.4■■□□□ 1.5
CDH23-204ENST00000398792 KANK1Q14678 1352 aa24.39■■□□□ 1.5
CDH23-204ENST00000398792 PKD2Q13563 968 aa24.38■■□□□ 1.49
CDH23-204ENST00000398792 LMTK2Q8IWU2 1503 aa24.38■■□□□ 1.49
CDH23-204ENST00000398792 CEP152O94986 1710 aa24.37■■□□□ 1.49
CDH23-204ENST00000398792 FOXD1Q16676 465 aa24.36■■□□□ 1.49
CDH23-204ENST00000398792 ANKRD30BQ9BXX2 1392 aa24.36■■□□□ 1.49
CDH23-204ENST00000398792 ZC3H13Q5T200 1668 aaKnown RBP24.35■■□□□ 1.49
CDH23-204ENST00000398792 E9PCH4 1651 aa24.34■■□□□ 1.49
CDH23-204ENST00000398792 EFCAB6Q5THR3 1501 aa24.34■■□□□ 1.49
CDH23-204ENST00000398792 ABCC3O15438 1527 aa24.33■■□□□ 1.49
CDH23-204ENST00000398792 GGT6Q6P531 493 aa24.31■■□□□ 1.48
CDH23-204ENST00000398792 SIN3AQ96ST3 1273 aa24.31■■□□□ 1.48
CDH23-204ENST00000398792 CAMSAP1Q5T5Y3 1602 aa24.29■■□□□ 1.48
CDH23-204ENST00000398792 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
CDH23-204ENST00000398792 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
CDH23-204ENST00000398792 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
CDH23-204ENST00000398792 PLA2R1Q13018 1463 aa24.23■■□□□ 1.47
CDH23-204ENST00000398792 WASHC2CQ9Y4E1 1318 aa24.22■■□□□ 1.47
CDH23-204ENST00000398792 TRPM2O94759 1503 aa24.22■■□□□ 1.47
CDH23-204ENST00000398792 PTPRTO14522 1441 aa24.2■■□□□ 1.46
CDH23-204ENST00000398792 NPATQ14207 1427 aa24.2■■□□□ 1.46
CDH23-204ENST00000398792 CLTCQ00610 1675 aaKnown RBP24.18■■□□□ 1.46
CDH23-204ENST00000398792 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
CDH23-204ENST00000398792 ARHGAP31Q2M1Z3 1444 aa24.18■■□□□ 1.46
CDH23-204ENST00000398792 TONSLQ96HA7 1378 aa24.18■■□□□ 1.46
CDH23-204ENST00000398792 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
CDH23-204ENST00000398792 CCDC144AA2RUR9 1427 aa24.17■■□□□ 1.46
CDH23-204ENST00000398792 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
CDH23-204ENST00000398792 MLECQ14165 292 aa24.13■■□□□ 1.45
CDH23-204ENST00000398792 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
CDH23-204ENST00000398792 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
CDH23-204ENST00000398792 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
CDH23-204ENST00000398792 NOS1P29475 1434 aa24.09■■□□□ 1.45
CDH23-204ENST00000398792 MROH2AA6NES4 1674 aa24.08■■□□□ 1.45
CDH23-204ENST00000398792 UGGT1Q9NYU2 1555 aa24.08■■□□□ 1.45
CDH23-204ENST00000398792 SYNMO15061 1565 aa24.07■■□□□ 1.44
CDH23-204ENST00000398792 FER1L4A9Z1Z3 1794 aa24.06■■□□□ 1.44
CDH23-204ENST00000398792 PIK3C2BO00750 1634 aa24.05■■□□□ 1.44
CDH23-204ENST00000398792 ERVK-7P63135 1459 aa24.04■■□□□ 1.44
CDH23-204ENST00000398792 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
CDH23-204ENST00000398792 L3MBTL2Q969R5 705 aa24.02■■□□□ 1.44
CDH23-204ENST00000398792 CFAP65Q6ZU64 1925 aaKnown RBP24.02■■□□□ 1.44
CDH23-204ENST00000398792 SPATA31D1Q6ZQQ2 1576 aa24.02■■□□□ 1.44
CDH23-204ENST00000398792 ESF1Q9H501 851 aaKnown RBP24.02■■□□□ 1.44
CDH23-204ENST00000398792 SPATA31E1Q6ZUB1 1445 aa24.02■■□□□ 1.44
CDH23-204ENST00000398792 KIF1BO60333 1816 aa24■■□□□ 1.43
CDH23-204ENST00000398792 PPP1R15AO75807 674 aaPredicted RBP23.99■■□□□ 1.43
CDH23-204ENST00000398792 ZMYM3Q14202 1370 aa23.99■■□□□ 1.43
CDH23-204ENST00000398792 ADGRB3O60242 1522 aa23.98■■□□□ 1.43
CDH23-204ENST00000398792 MADDQ8WXG6 1647 aa23.97■■□□□ 1.43
CDH23-204ENST00000398792 ADAMTSL3P82987 1691 aa23.96■■□□□ 1.43
CDH23-204ENST00000398792 C3P01024 1663 aa23.95■■□□□ 1.42
CDH23-204ENST00000398792 FBXO31Q5XUX0 539 aaPredicted RBP23.94■■□□□ 1.42
CDH23-204ENST00000398792 RIMS1Q86UR5 1692 aaKnown RBP23.92■■□□□ 1.42
CDH23-204ENST00000398792 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
CDH23-204ENST00000398792 IFT172Q9UG01 1749 aa23.89■■□□□ 1.42
CDH23-204ENST00000398792 RGL3Q3MIN7 710 aa23.89■■□□□ 1.42
CDH23-204ENST00000398792 SLC52A1Q9NWF4 448 aa23.89■■□□□ 1.42
CDH23-204ENST00000398792 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
CDH23-204ENST00000398792 DCAF11Q8TEB1 546 aa23.86■■□□□ 1.41
CDH23-204ENST00000398792 TNRQ92752 1358 aa23.85■■□□□ 1.41
CDH23-204ENST00000398792 IDI1Q13907 227 aa23.84■■□□□ 1.41
CDH23-204ENST00000398792 NBPF8Q3BBV2 869 aa23.84■■□□□ 1.41
CDH23-204ENST00000398792 PRAG1Q86YV5 1406 aa23.83■■□□□ 1.41
CDH23-204ENST00000398792 MYOM2P54296 1465 aa23.83■■□□□ 1.41
CDH23-204ENST00000398792 PPLO60437 1756 aa23.82■■□□□ 1.4
CDH23-204ENST00000398792 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
CDH23-204ENST00000398792 CHGAP10645 457 aaKnown RBP23.81■■□□□ 1.4
CDH23-204ENST00000398792 RALGAPBQ86X10 1494 aa23.81■■□□□ 1.4
CDH23-204ENST00000398792 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
CDH23-204ENST00000398792 NEXMIFQ5QGS0 1516 aa23.8■■□□□ 1.4
CDH23-204ENST00000398792 CEBPAP49715 358 aaPredicted RBP23.8■■□□□ 1.4
CDH23-204ENST00000398792 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
CDH23-204ENST00000398792 TRPM1Q7Z4N2 1603 aa23.79■■□□□ 1.4
CDH23-204ENST00000398792 NLRP1Q9C000 1473 aa23.79■■□□□ 1.4
CDH23-204ENST00000398792 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
CDH23-204ENST00000398792 STAC3Q96MF2 364 aa23.77■■□□□ 1.4
CDH23-204ENST00000398792 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
CDH23-204ENST00000398792 A2ML1A8K2U0 1454 aa23.77■■□□□ 1.39
CDH23-204ENST00000398792 RPGRIP1LQ68CZ1 1315 aa23.75■■□□□ 1.39
CDH23-204ENST00000398792 NRXN1Q9ULB1 1477 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms